RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 ANKLE2Q86XL3 938 aa9.73□□□□□ -0.85
CDKL5-211ENST00000637881 PDCL2Q8N4E4 241 aa9.73□□□□□ -0.85
CDKL5-211ENST00000637881 PIK3C2BO00750 1634 aa9.73□□□□□ -0.85
CDKL5-211ENST00000637881 GOLGA6L22H0YM25 854 aa9.73□□□□□ -0.85
CDKL5-211ENST00000637881 PLIN1O60240 522 aa9.73□□□□□ -0.85
CDKL5-211ENST00000637881 KIAA2012Q0VF49 1180 aa9.73□□□□□ -0.85
CDKL5-211ENST00000637881 SETD1BQ9UPS6 1966 aaKnown RBP9.72□□□□□ -0.85
CDKL5-211ENST00000637881 A2ML1A8K2U0 1454 aa9.72□□□□□ -0.85
CDKL5-211ENST00000637881 RAB3GAP1Q15042 981 aa9.72□□□□□ -0.85
CDKL5-211ENST00000637881 SYCP1Q15431 976 aa9.72□□□□□ -0.85
CDKL5-211ENST00000637881 NLRP13Q86W25 1043 aa9.72□□□□□ -0.85
CDKL5-211ENST00000637881 HSCBQ8IWL3 235 aa9.72□□□□□ -0.85
CDKL5-211ENST00000637881 SMC5Q8IY18 1101 aa9.72□□□□□ -0.85
CDKL5-211ENST00000637881 ARID3AQ99856 593 aa9.72□□□□□ -0.85
CDKL5-211ENST00000637881 ADGRF5Q8IZF2 1346 aa9.72□□□□□ -0.85
CDKL5-211ENST00000637881 CTR9Q6PD62 1173 aa9.71□□□□□ -0.85
CDKL5-211ENST00000637881 CEP120Q8N960 986 aa9.71□□□□□ -0.85
CDKL5-211ENST00000637881 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.71□□□□□ -0.85
CDKL5-211ENST00000637881 ANKRD7Q92527 254 aa9.71□□□□□ -0.85
CDKL5-211ENST00000637881 SNX21Q969T3 373 aa9.71□□□□□ -0.85
CDKL5-211ENST00000637881 SLC26A8Q96RN1 970 aa9.71□□□□□ -0.85
CDKL5-211ENST00000637881 PANK3Q9H999 370 aa9.71□□□□□ -0.85
CDKL5-211ENST00000637881 PARD3Q8TEW0 1356 aa9.71□□□□□ -0.85
CDKL5-211ENST00000637881 RIMS2Q9UQ26 1411 aa9.71□□□□□ -0.85
CDKL5-211ENST00000637881 MYO3AQ8NEV4 1616 aa9.71□□□□□ -0.86
CDKL5-211ENST00000637881 CEP170BQ9Y4F5 1589 aaPredicted RBP9.71□□□□□ -0.86
CDKL5-211ENST00000637881 TMEM2Q9UHN6 1383 aa9.7□□□□□ -0.86
CDKL5-211ENST00000637881 MFAP1P55081 439 aaKnown RBP9.7□□□□□ -0.86
CDKL5-211ENST00000637881 NPC1L1Q9UHC9 1359 aa9.7□□□□□ -0.86
CDKL5-211ENST00000637881 RPGRIP1LQ68CZ1 1315 aa9.7□□□□□ -0.86
CDKL5-211ENST00000637881 SEC24BO95487 1268 aa9.7□□□□□ -0.86
CDKL5-211ENST00000637881 CGNL1Q0VF96 1302 aa9.69□□□□□ -0.86
CDKL5-211ENST00000637881 KIF1BO60333 1816 aa9.69□□□□□ -0.86
CDKL5-211ENST00000637881 ZBTB22O15209 634 aa9.69□□□□□ -0.86
CDKL5-211ENST00000637881 TNPO1Q92973 898 aaKnown RBP9.69□□□□□ -0.86
CDKL5-211ENST00000637881 TMEM131LA2VDJ0 1609 aa9.69□□□□□ -0.86
CDKL5-211ENST00000637881 ADGRB3O60242 1522 aa9.69□□□□□ -0.86
CDKL5-211ENST00000637881 NBPF8Q3BBV2 869 aa9.68□□□□□ -0.86
CDKL5-211ENST00000637881 CFAP70Q5T0N1 1121 aa9.68□□□□□ -0.86
CDKL5-211ENST00000637881 C20orf194Q5TEA3 1177 aa9.68□□□□□ -0.86
CDKL5-211ENST00000637881 TMEM132EQ6IEE7 984 aa9.68□□□□□ -0.86
CDKL5-211ENST00000637881 CERKQ8TCT0 537 aa9.68□□□□□ -0.86
CDKL5-211ENST00000637881 SOX12O15370 315 aa9.68□□□□□ -0.86
CDKL5-211ENST00000637881 SLFN14P0C7P3 912 aa9.68□□□□□ -0.86
CDKL5-211ENST00000637881 GRIPAP1Q4V328 841 aa9.68□□□□□ -0.86
CDKL5-211ENST00000637881 FOXD4L1Q9NU39 408 aa9.68□□□□□ -0.86
CDKL5-211ENST00000637881 STK26Q9P289 416 aa9.68□□□□□ -0.86
CDKL5-211ENST00000637881 MYO5BQ9ULV0 1848 aa9.68□□□□□ -0.86
CDKL5-211ENST00000637881 USP47Q96K76 1375 aa9.67□□□□□ -0.86
CDKL5-211ENST00000637881 APPP05067 770 aa9.67□□□□□ -0.86
CDKL5-211ENST00000637881 CNPY4Q8N129 248 aa9.67□□□□□ -0.86
CDKL5-211ENST00000637881 DIAPH3Q9NSV4 1193 aa9.67□□□□□ -0.86
CDKL5-211ENST00000637881 UBR1Q8IWV7 1749 aa9.67□□□□□ -0.86
CDKL5-211ENST00000637881 RALGAPBQ86X10 1494 aa9.66□□□□□ -0.86
CDKL5-211ENST00000637881 PIBF1Q8WXW3 757 aa9.66□□□□□ -0.86
CDKL5-211ENST00000637881 CDCA7LQ96GN5 454 aa9.66□□□□□ -0.86
CDKL5-211ENST00000637881 BCL2L12Q9HB09 334 aa9.66□□□□□ -0.86
CDKL5-211ENST00000637881 RAD50Q92878 1312 aa9.66□□□□□ -0.86
CDKL5-211ENST00000637881 TRIM6-TRIM34B2RNG4 842 aa9.65□□□□□ -0.86
CDKL5-211ENST00000637881 E9PSI1 815 aa9.65□□□□□ -0.86
CDKL5-211ENST00000637881 PHF14O94880 888 aa9.65□□□□□ -0.86
CDKL5-211ENST00000637881 CAPN2P17655 700 aa9.65□□□□□ -0.86
CDKL5-211ENST00000637881 CC2D1BQ5T0F9 858 aaKnown RBP9.65□□□□□ -0.86
CDKL5-211ENST00000637881 TRIM34Q9BYJ4 488 aa9.65□□□□□ -0.86
CDKL5-211ENST00000637881 SPTLC3Q9NUV7 552 aa9.65□□□□□ -0.86
CDKL5-211ENST00000637881 CTIFO43310 598 aaKnown RBP9.65□□□□□ -0.87
CDKL5-211ENST00000637881 ZFYVE9O95405 1425 aa9.65□□□□□ -0.87
CDKL5-211ENST00000637881 WWC1Q8IX03 1113 aa9.65□□□□□ -0.87
CDKL5-211ENST00000637881 C22orf23Q9BZE7 217 aa9.65□□□□□ -0.87
CDKL5-211ENST00000637881 BRMS1Q9HCU9 246 aa9.65□□□□□ -0.87
CDKL5-211ENST00000637881 SCAF11Q99590 1463 aaKnown RBP9.64□□□□□ -0.87
CDKL5-211ENST00000637881 FKBP5Q13451 457 aaPredicted RBP9.64□□□□□ -0.87
CDKL5-211ENST00000637881 PMFBP1Q8TBY8 1022 aa9.64□□□□□ -0.87
CDKL5-211ENST00000637881 NEXMIFQ5QGS0 1516 aa9.63□□□□□ -0.87
CDKL5-211ENST00000637881 PDE3AQ14432 1141 aa9.63□□□□□ -0.87
CDKL5-211ENST00000637881 TERF2Q15554 542 aa9.63□□□□□ -0.87
CDKL5-211ENST00000637881 MYCBPQ99417 103 aaPredicted RBP9.63□□□□□ -0.87
CDKL5-211ENST00000637881 FBXO3Q9UK99 471 aa9.63□□□□□ -0.87
CDKL5-211ENST00000637881 MORC2Q9Y6X9 1032 aaPredicted RBP9.63□□□□□ -0.87
CDKL5-211ENST00000637881 CHAF1AQ13111 956 aaPredicted RBP9.63□□□□□ -0.87
CDKL5-211ENST00000637881 IFFO2Q5TF58 517 aa9.63□□□□□ -0.87
CDKL5-211ENST00000637881 RBM33Q96EV2 1170 aaKnown RBP9.63□□□□□ -0.87
CDKL5-211ENST00000637881 CARD11Q9BXL7 1154 aa9.63□□□□□ -0.87
CDKL5-211ENST00000637881 C14orf93Q9H972 538 aaKnown RBP9.63□□□□□ -0.87
CDKL5-211ENST00000637881 FEZ2Q9UHY8 353 aaPredicted RBP9.63□□□□□ -0.87
CDKL5-211ENST00000637881 KCNG1Q9UIX4 513 aa9.63□□□□□ -0.87
CDKL5-211ENST00000637881 TRAK1Q9UPV9 953 aa9.63□□□□□ -0.87
CDKL5-211ENST00000637881 DDX49Q9Y6V7 483 aaKnown RBP9.63□□□□□ -0.87
CDKL5-211ENST00000637881 ARHGAP23Q9P227 1491 aa9.62□□□□□ -0.87
CDKL5-211ENST00000637881 NPHP4O75161 1426 aaPredicted RBP9.62□□□□□ -0.87
CDKL5-211ENST00000637881 MCCP23508 829 aa9.62□□□□□ -0.87
CDKL5-211ENST00000637881 HAP1P54257 671 aaPredicted RBP9.62□□□□□ -0.87
CDKL5-211ENST00000637881 SAFB2Q14151 953 aaKnown RBP eCLIP9.62□□□□□ -0.87
CDKL5-211ENST00000637881 ZSCAN23Q3MJ62 389 aa9.62□□□□□ -0.87
CDKL5-211ENST00000637881 DUSP27Q5VZP5 1158 aa9.62□□□□□ -0.87
CDKL5-211ENST00000637881 DDX41Q9UJV9 622 aaKnown RBP9.62□□□□□ -0.87
CDKL5-211ENST00000637881 PLEKHG1Q9ULL1 1385 aa9.62□□□□□ -0.87
CDKL5-211ENST00000637881 NKTRP30414 1462 aaKnown RBP9.62□□□□□ -0.87
CDKL5-211ENST00000637881 ZNF142P52746 1687 aaPredicted RBP9.62□□□□□ -0.87
CDKL5-211ENST00000637881 SLIT1O75093 1534 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms