RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 ARHGEF25Q86VW2 580 aa19.94■□□□□ 0.78
CACNA1A-249ENST00000637777 KIF20BQ96Q89 1820 aa19.94■□□□□ 0.78
CACNA1A-249ENST00000637777 SPATA31A1Q5TZJ5 1347 aa19.94■□□□□ 0.78
CACNA1A-249ENST00000637777 KRT27Q7Z3Y8 459 aa19.92■□□□□ 0.78
CACNA1A-249ENST00000637777 OVOS2A0A0J9YW53 1432 aa19.92■□□□□ 0.78
CACNA1A-249ENST00000637777 OVOS2Q6IE36 1432 aa19.92■□□□□ 0.78
CACNA1A-249ENST00000637777 NSD3Q9BZ95 1437 aa19.92■□□□□ 0.78
CACNA1A-249ENST00000637777 TCP11L2Q8N4U5 519 aa19.91■□□□□ 0.78
CACNA1A-249ENST00000637777 GGNBP2Q9H3C7 697 aa19.91■□□□□ 0.78
CACNA1A-249ENST00000637777 COL18A1P39060 1754 aa19.9■□□□□ 0.78
CACNA1A-249ENST00000637777 CRB1P82279 1406 aa19.9■□□□□ 0.78
CACNA1A-249ENST00000637777 AXIN2Q9Y2T1 843 aa19.89■□□□□ 0.77
CACNA1A-249ENST00000637777 ONECUT3O60422 494 aaPredicted RBP19.88■□□□□ 0.77
CACNA1A-249ENST00000637777 WDR17Q8IZU2 1322 aa19.87■□□□□ 0.77
CACNA1A-249ENST00000637777 THSD7AQ9UPZ6 1657 aa19.87■□□□□ 0.77
CACNA1A-249ENST00000637777 ABCC6O95255 1503 aa19.86■□□□□ 0.77
CACNA1A-249ENST00000637777 FYB1O15117 783 aa19.86■□□□□ 0.77
CACNA1A-249ENST00000637777 AMPHP49418 695 aa19.86■□□□□ 0.77
CACNA1A-249ENST00000637777 PDE3BQ13370 1112 aa19.86■□□□□ 0.77
CACNA1A-249ENST00000637777 SF3B2Q13435 895 aaKnown RBP19.86■□□□□ 0.77
CACNA1A-249ENST00000637777 THRAP3Q9Y2W1 955 aaKnown RBP19.86■□□□□ 0.77
CACNA1A-249ENST00000637777 CGNL1Q0VF96 1302 aa19.85■□□□□ 0.77
CACNA1A-249ENST00000637777 BARGINQ6ZT62 677 aa19.85■□□□□ 0.77
CACNA1A-249ENST00000637777 LTV1Q96GA3 475 aaPredicted RBP19.85■□□□□ 0.77
CACNA1A-249ENST00000637777 CARD14Q9BXL6 1004 aa19.85■□□□□ 0.77
CACNA1A-249ENST00000637777 EP400Q96L91 3159 aa19.84■□□□□ 0.77
CACNA1A-249ENST00000637777 FAM182BQ5T319 152 aa19.84■□□□□ 0.77
CACNA1A-249ENST00000637777 NLRP2Q9NX02 1062 aa19.84■□□□□ 0.77
CACNA1A-249ENST00000637777 FBLN1P23142 703 aa19.83■□□□□ 0.77
CACNA1A-249ENST00000637777 ANKRD24Q8TF21 1146 aa19.83■□□□□ 0.77
CACNA1A-249ENST00000637777 PANK3Q9H999 370 aa19.83■□□□□ 0.77
CACNA1A-249ENST00000637777 RRS1Q15050 365 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-249ENST00000637777 MAP3K19Q56UN5 1328 aa19.81■□□□□ 0.76
CACNA1A-249ENST00000637777 C11orf95C9JLR9 678 aaPredicted RBP19.81■□□□□ 0.76
CACNA1A-249ENST00000637777 ERBB3P21860 1342 aa19.8■□□□□ 0.76
CACNA1A-249ENST00000637777 BLMP54132 1417 aaPredicted RBP19.8■□□□□ 0.76
CACNA1A-249ENST00000637777 CCDC125Q86Z20 511 aa19.8■□□□□ 0.76
CACNA1A-249ENST00000637777 IP6K1Q92551 441 aa19.8■□□□□ 0.76
CACNA1A-249ENST00000637777 CARD10Q9BWT7 1032 aa19.8■□□□□ 0.76
CACNA1A-249ENST00000637777 WNK3Q9BYP7 1800 aa19.8■□□□□ 0.76
CACNA1A-249ENST00000637777 KIF7Q2M1P5 1343 aa19.79■□□□□ 0.76
CACNA1A-249ENST00000637777 DDB1Q16531 1140 aa19.79■□□□□ 0.76
CACNA1A-249ENST00000637777 CCDC7Q96M83 1385 aa19.79■□□□□ 0.76
CACNA1A-249ENST00000637777 PARP4Q9UKK3 1724 aaKnown RBP19.79■□□□□ 0.76
CACNA1A-249ENST00000637777 PPM1GO15355 546 aaPredicted RBP19.78■□□□□ 0.76
CACNA1A-249ENST00000637777 HOXC9P31274 260 aa19.78■□□□□ 0.76
CACNA1A-249ENST00000637777 SMG6Q86US8 1419 aaKnown RBP19.77■□□□□ 0.76
CACNA1A-249ENST00000637777 TNNT2P45379 298 aaPredicted RBP19.77■□□□□ 0.76
CACNA1A-249ENST00000637777 KNSTRNQ9Y448 316 aa19.77■□□□□ 0.76
CACNA1A-249ENST00000637777 FAM208AQ9UK61 1670 aaKnown RBP19.76■□□□□ 0.75
CACNA1A-249ENST00000637777 RTL1A6NKG5 1358 aa19.76■□□□□ 0.75
CACNA1A-249ENST00000637777 CDCA7Q9BWT1 371 aaPredicted RBP19.76■□□□□ 0.75
CACNA1A-249ENST00000637777 ANKRD26Q9UPS8 1709 aa19.76■□□□□ 0.75
CACNA1A-249ENST00000637777 LRRC37A3O60309 1634 aa19.76■□□□□ 0.75
CACNA1A-249ENST00000637777 FAM196AQ6ZSG2 479 aa19.75■□□□□ 0.75
CACNA1A-249ENST00000637777 RGPD1P0DJD0 1748 aa19.74■□□□□ 0.75
CACNA1A-249ENST00000637777 FLT4P35916 1363 aa19.72■□□□□ 0.75
CACNA1A-249ENST00000637777 MAP2P11137 1827 aaKnown RBP19.72■□□□□ 0.75
CACNA1A-249ENST00000637777 EXOC5O00471 708 aa19.72■□□□□ 0.75
CACNA1A-249ENST00000637777 TRIM37O94972 964 aa19.72■□□□□ 0.75
CACNA1A-249ENST00000637777 BAG6P46379 1132 aa19.72■□□□□ 0.75
CACNA1A-249ENST00000637777 EMILIN1Q9Y6C2 1016 aa19.72■□□□□ 0.75
CACNA1A-249ENST00000637777 IL2RBP14784 551 aa19.71■□□□□ 0.75
CACNA1A-249ENST00000637777 DEFB132Q7Z7B7 95 aa19.71■□□□□ 0.75
CACNA1A-249ENST00000637777 NSD2O96028 1365 aa19.7■□□□□ 0.74
CACNA1A-249ENST00000637777 RGPD2P0DJD1 1756 aa19.7■□□□□ 0.74
CACNA1A-249ENST00000637777 OVOS2A0A0G2JMS6 1433 aa19.7■□□□□ 0.74
CACNA1A-249ENST00000637777 CNGB1Q14028 1251 aaPredicted RBP19.7■□□□□ 0.74
CACNA1A-249ENST00000637777 MORC1Q86VD1 984 aa19.7■□□□□ 0.74
CACNA1A-249ENST00000637777 PEAK1Q9H792 1746 aa19.7■□□□□ 0.74
CACNA1A-249ENST00000637777 HSP90AB2PQ58FF8 381 aa19.69■□□□□ 0.74
CACNA1A-249ENST00000637777 DISP2A7MBM2 1401 aa19.68■□□□□ 0.74
CACNA1A-249ENST00000637777 TNS2Q63HR2 1409 aa19.68■□□□□ 0.74
CACNA1A-249ENST00000637777 KAT6BQ8WYB5 2073 aa19.67■□□□□ 0.74
CACNA1A-249ENST00000637777 USHBP1Q8N6Y0 703 aa19.67■□□□□ 0.74
CACNA1A-249ENST00000637777 WASHC2AQ641Q2 1341 aa19.67■□□□□ 0.74
CACNA1A-249ENST00000637777 INSRP06213 1382 aa19.67■□□□□ 0.74
CACNA1A-249ENST00000637777 KIF24Q5T7B8 1368 aa19.67■□□□□ 0.74
CACNA1A-249ENST00000637777 TNS1Q9HBL0 1735 aaKnown RBP19.66■□□□□ 0.74
CACNA1A-249ENST00000637777 APBA3O96018 575 aa19.65■□□□□ 0.74
CACNA1A-249ENST00000637777 EN1Q05925 392 aaPredicted RBP19.64■□□□□ 0.73
CACNA1A-249ENST00000637777 MARCH10Q8NA82 808 aaPredicted RBP19.64■□□□□ 0.73
CACNA1A-249ENST00000637777 RAPGEF4Q8WZA2 1011 aa19.64■□□□□ 0.73
CACNA1A-249ENST00000637777 CC2D1BQ5T0F9 858 aaKnown RBP19.63■□□□□ 0.73
CACNA1A-249ENST00000637777 POLKQ9UBT6 870 aa19.63■□□□□ 0.73
CACNA1A-249ENST00000637777 NBPF6Q5VWK0 638 aa19.62■□□□□ 0.73
CACNA1A-249ENST00000637777 DDX54Q8TDD1 881 aaKnown RBP19.62■□□□□ 0.73
CACNA1A-249ENST00000637777 NBPF4Q96M43 638 aa19.62■□□□□ 0.73
CACNA1A-249ENST00000637777 SBF2Q86WG5 1849 aa19.61■□□□□ 0.73
CACNA1A-249ENST00000637777 TATP17735 454 aaPredicted RBP19.6■□□□□ 0.73
CACNA1A-249ENST00000637777 AMER1Q5JTC6 1135 aaPredicted RBP19.59■□□□□ 0.73
CACNA1A-249ENST00000637777 ACSBG1Q96GR2 724 aa19.59■□□□□ 0.73
CACNA1A-249ENST00000637777 MEGF6O75095 1541 aa19.58■□□□□ 0.73
CACNA1A-249ENST00000637777 EZH2Q15910 746 aaKnown RBP19.58■□□□□ 0.72
CACNA1A-249ENST00000637777 ZCRB1Q8TBF4 217 aaKnown RBP19.58■□□□□ 0.72
CACNA1A-249ENST00000637777 BCL11BQ9C0K0 894 aaPredicted RBP19.56■□□□□ 0.72
CACNA1A-249ENST00000637777 EIF4A2Q14240 407 aaKnown RBP19.55■□□□□ 0.72
CACNA1A-249ENST00000637777 SYTL4Q96C24 671 aaPredicted RBP19.54■□□□□ 0.72
CACNA1A-249ENST00000637777 PER1O15534 1290 aaPredicted RBP19.53■□□□□ 0.72
CACNA1A-249ENST00000637777 EYA1Q99502 592 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms