RNA–Protein interactions for RNA: ENST00000637613.1

CHD2-228, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-228ENST00000637613 NR3C2P08235 984 aa6.9□□□□□ -1.3
CHD2-228ENST00000637613 GUCA2AQ02747 115 aa6.9□□□□□ -1.3
CHD2-228ENST00000637613 TRIM26Q12899 539 aaPredicted RBP6.9□□□□□ -1.3
CHD2-228ENST00000637613 LYPD4Q6UWN0 246 aa6.9□□□□□ -1.3
CHD2-228ENST00000637613 SPTLC1O15269 473 aa6.89□□□□□ -1.31
CHD2-228ENST00000637613 ADAMTS2O95450 1211 aa6.89□□□□□ -1.31
CHD2-228ENST00000637613 HRCP23327 699 aa6.89□□□□□ -1.31
CHD2-228ENST00000637613 KCNH2Q12809 1159 aa6.89□□□□□ -1.31
CHD2-228ENST00000637613 TTLL12Q14166 644 aaPredicted RBP6.89□□□□□ -1.31
CHD2-228ENST00000637613 SH3D19Q5HYK7 790 aa6.89□□□□□ -1.31
CHD2-228ENST00000637613 TTLL8A6PVC2 850 aa6.88□□□□□ -1.31
CHD2-228ENST00000637613 APBB1O00213 710 aa6.88□□□□□ -1.31
CHD2-228ENST00000637613 SV2AQ7L0J3 742 aa6.88□□□□□ -1.31
CHD2-228ENST00000637613 VWA5B2Q8N398 1253 aa6.88□□□□□ -1.31
CHD2-228ENST00000637613 PCMTD1Q96MG8 357 aaPredicted RBP6.88□□□□□ -1.31
CHD2-228ENST00000637613 TSEN34Q9BSV6 310 aaKnown RBP6.88□□□□□ -1.31
CHD2-228ENST00000637613 ENAMQ9NRM1 1142 aa6.88□□□□□ -1.31
CHD2-228ENST00000637613 TRAK2O60296 914 aa6.87□□□□□ -1.31
CHD2-228ENST00000637613 ITGA6P23229 1130 aa6.87□□□□□ -1.31
CHD2-228ENST00000637613 KRTAP4-12Q9BQ66 201 aa6.87□□□□□ -1.31
CHD2-228ENST00000637613 SLC35F4A4IF30 521 aa6.86□□□□□ -1.31
CHD2-228ENST00000637613 ARID3CA6NKF2 412 aa6.86□□□□□ -1.31
CHD2-228ENST00000637613 CELA2BP08218 269 aaPredicted RBP6.86□□□□□ -1.31
CHD2-228ENST00000637613 SRSF11Q05519 484 aaKnown RBP6.86□□□□□ -1.31
CHD2-228ENST00000637613 MCM6Q14566 821 aa6.86□□□□□ -1.31
CHD2-228ENST00000637613 ARID5BQ14865 1188 aa6.86□□□□□ -1.31
CHD2-228ENST00000637613 CNTNAP5Q8WYK1 1306 aa6.85□□□□□ -1.31
CHD2-228ENST00000637613 CLCN1P35523 988 aa6.85□□□□□ -1.31
CHD2-228ENST00000637613 GRM5P41594 1212 aa6.85□□□□□ -1.31
CHD2-228ENST00000637613 BAG6P46379 1132 aa6.85□□□□□ -1.31
CHD2-228ENST00000637613 BEND7Q8N7W2 519 aaPredicted RBP6.85□□□□□ -1.31
CHD2-228ENST00000637613 CDC14CA4D256 554 aa6.84□□□□□ -1.31
CHD2-228ENST00000637613 SKIV2LQ15477 1246 aaKnown RBP6.84□□□□□ -1.31
CHD2-228ENST00000637613 ARID3AQ99856 593 aa6.84□□□□□ -1.31
CHD2-228ENST00000637613 GPCPD1Q9NPB8 672 aa6.84□□□□□ -1.31
CHD2-228ENST00000637613 PODNQ7Z5L7 613 aa6.83□□□□□ -1.32
CHD2-228ENST00000637613 CLUAP1Q96AJ1 413 aa6.83□□□□□ -1.32
CHD2-228ENST00000637613 FIGNL2A6NMB9 653 aa6.82□□□□□ -1.32
CHD2-228ENST00000637613 C6orf229H3BNL8 230 aa6.82□□□□□ -1.32
CHD2-228ENST00000637613 FNBP4Q8N3X1 1017 aaPredicted RBP6.82□□□□□ -1.32
CHD2-228ENST00000637613 SSTR3P32745 418 aaPredicted RBP6.81□□□□□ -1.32
CHD2-228ENST00000637613 BTBD11A6QL63 1104 aa6.8□□□□□ -1.32
CHD2-228ENST00000637613 FDX1P10109 184 aa6.8□□□□□ -1.32
CHD2-228ENST00000637613 MDM2Q00987 491 aaPredicted RBP6.8□□□□□ -1.32
CHD2-228ENST00000637613 DESI1Q6ICB0 168 aa6.8□□□□□ -1.32
CHD2-228ENST00000637613 SH3RF1Q7Z6J0 888 aa6.8□□□□□ -1.32
CHD2-228ENST00000637613 CCDC82Q8N4S0 544 aa6.8□□□□□ -1.32
CHD2-228ENST00000637613 FOXJ1Q92949 421 aa6.8□□□□□ -1.32
CHD2-228ENST00000637613 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.8□□□□□ -1.32
CHD2-228ENST00000637613 KRTAP9-9Q9BYP9 154 aa6.8□□□□□ -1.32
CHD2-228ENST00000637613 KRTAP9-4Q9BYQ2 154 aa6.8□□□□□ -1.32
CHD2-228ENST00000637613 FAM217BQ9NTX9 383 aaPredicted RBP6.8□□□□□ -1.32
CHD2-228ENST00000637613 PCDHGC3Q9UN70 934 aa6.8□□□□□ -1.32
CHD2-228ENST00000637613 FURINP09958 794 aa6.79□□□□□ -1.32
CHD2-228ENST00000637613 SPINT1O43278 529 aa6.78□□□□□ -1.32
CHD2-228ENST00000637613 GAS6Q14393 721 aa6.78□□□□□ -1.32
CHD2-228ENST00000637613 PROCA1Q8NCQ7 364 aaPredicted RBP6.78□□□□□ -1.32
CHD2-228ENST00000637613 EMILIN1Q9Y6C2 1016 aa6.78□□□□□ -1.32
CHD2-228ENST00000637613 PROSER2Q86WR7 435 aaPredicted RBP6.77□□□□□ -1.33
CHD2-228ENST00000637613 NUTM1Q86Y26 1132 aa6.77□□□□□ -1.33
CHD2-228ENST00000637613 BEGAINQ9BUH8 593 aa6.77□□□□□ -1.33
CHD2-228ENST00000637613 KRTAP4-8A0A0G2JLE6 195 aa6.76□□□□□ -1.33
CHD2-228ENST00000637613 MYSM1Q5VVJ2 828 aa6.76□□□□□ -1.33
CHD2-228ENST00000637613 PRR7Q8TB68 274 aa6.76□□□□□ -1.33
CHD2-228ENST00000637613 SPDYE5A6NIY4 337 aa6.75□□□□□ -1.33
CHD2-228ENST00000637613 FSHRP23945 695 aa6.75□□□□□ -1.33
CHD2-228ENST00000637613 C4orf48Q5BLP8 95 aa6.75□□□□□ -1.33
CHD2-228ENST00000637613 BANK1Q8NDB2 785 aa6.75□□□□□ -1.33
CHD2-228ENST00000637613 NEDD1Q8NHV4 660 aa6.75□□□□□ -1.33
CHD2-228ENST00000637613 POM121Q96HA1 1249 aa6.75□□□□□ -1.33
CHD2-228ENST00000637613 KRBA1A5PL33 1030 aa6.74□□□□□ -1.33
CHD2-228ENST00000637613 BCRP11274 1271 aa6.74□□□□□ -1.33
CHD2-228ENST00000637613 PDIA4P13667 645 aaKnown RBP6.74□□□□□ -1.33
CHD2-228ENST00000637613 CTHP32929 405 aa6.74□□□□□ -1.33
CHD2-228ENST00000637613 BPHLQ86WA6 291 aaPredicted RBP6.74□□□□□ -1.33
CHD2-228ENST00000637613 MAP4K5Q9Y4K4 846 aa6.74□□□□□ -1.33
CHD2-228ENST00000637613 SENP3-EIF4A1A0A087X0R7 540 aa6.73□□□□□ -1.33
CHD2-228ENST00000637613 AGERQ15109 404 aa6.73□□□□□ -1.33
CHD2-228ENST00000637613 Q6ZVU0 165 aa6.73□□□□□ -1.33
CHD2-228ENST00000637613 ALYREFQ86V81 257 aaKnown RBP6.73□□□□□ -1.33
CHD2-228ENST00000637613 CCDC116Q8IYX3 515 aa6.73□□□□□ -1.33
CHD2-228ENST00000637613 MBIPQ9NS73 344 aa6.73□□□□□ -1.33
CHD2-228ENST00000637613 LRRC4BQ9NT99 713 aa6.73□□□□□ -1.33
CHD2-228ENST00000637613 PPP2R2DQ66LE6 453 aa6.72□□□□□ -1.33
CHD2-228ENST00000637613 C1QTNF2Q9BXJ5 285 aa6.72□□□□□ -1.33
CHD2-228ENST00000637613 POLR3EQ9NVU0 708 aa6.72□□□□□ -1.33
CHD2-228ENST00000637613 SERPINA10Q9UK55 444 aa6.72□□□□□ -1.33
CHD2-228ENST00000637613 ZNF777Q9ULD5 760 aaPredicted RBP6.72□□□□□ -1.33
CHD2-228ENST00000637613 COG6Q9Y2V7 657 aa6.72□□□□□ -1.33
CHD2-228ENST00000637613 SOCS7O14512 581 aa6.71□□□□□ -1.34
CHD2-228ENST00000637613 CLK2P49760 499 aaKnown RBP6.71□□□□□ -1.34
CHD2-228ENST00000637613 TUSC1Q2TAM9 212 aa6.71□□□□□ -1.34
CHD2-228ENST00000637613 FBXO31Q5XUX0 539 aaPredicted RBP6.71□□□□□ -1.34
CHD2-228ENST00000637613 LYPD8Q6UX82 237 aa6.71□□□□□ -1.34
CHD2-228ENST00000637613 TRAIPQ9BWF2 469 aa6.71□□□□□ -1.34
CHD2-228ENST00000637613 TBC1D2Q9BYX2 928 aa6.71□□□□□ -1.34
CHD2-228ENST00000637613 RAD21O60216 631 aa6.7□□□□□ -1.34
CHD2-228ENST00000637613 RFC5P40937 340 aa6.7□□□□□ -1.34
CHD2-228ENST00000637613 DIXDC1Q155Q3 683 aa6.7□□□□□ -1.34
CHD2-228ENST00000637613 IGF1RP08069 1367 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms