RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 HSP90AB2PQ58FF8 381 aa22.21■■□□□ 1.15
CLCN2-220ENST00000637538 U2SURPO15042 1029 aaKnown RBP22.2■■□□□ 1.14
CLCN2-220ENST00000637538 RUNDC1Q96C34 613 aa22.2■■□□□ 1.14
CLCN2-220ENST00000637538 PLEKHF1Q96S99 279 aa22.2■■□□□ 1.14
CLCN2-220ENST00000637538 HOXC9P31274 260 aa22.19■■□□□ 1.14
CLCN2-220ENST00000637538 LMOD2Q6P5Q4 547 aa22.19■■□□□ 1.14
CLCN2-220ENST00000637538 SENP3-EIF4A1A0A087X0R7 540 aa22.18■■□□□ 1.14
CLCN2-220ENST00000637538 JCADQ9P266 1359 aa22.18■■□□□ 1.14
CLCN2-220ENST00000637538 PHLPP1O60346 1717 aa22.18■■□□□ 1.14
CLCN2-220ENST00000637538 AMPHP49418 695 aa22.17■■□□□ 1.14
CLCN2-220ENST00000637538 COL16A1Q07092 1604 aaPredicted RBP22.17■■□□□ 1.14
CLCN2-220ENST00000637538 ARHGEF25Q86VW2 580 aa22.17■■□□□ 1.14
CLCN2-220ENST00000637538 ZNF521Q96K83 1311 aa22.16■■□□□ 1.14
CLCN2-220ENST00000637538 APAF1O14727 1248 aa22.16■■□□□ 1.14
CLCN2-220ENST00000637538 FCHSD2O94868 740 aa22.16■■□□□ 1.14
CLCN2-220ENST00000637538 RSPH6AQ9H0K4 717 aa22.16■■□□□ 1.14
CLCN2-220ENST00000637538 NGEFQ8N5V2 710 aa22.16■■□□□ 1.14
CLCN2-220ENST00000637538 IP6K1Q92551 441 aa22.16■■□□□ 1.14
CLCN2-220ENST00000637538 LRRC59Q96AG4 307 aaKnown RBP22.16■■□□□ 1.14
CLCN2-220ENST00000637538 NCBP3Q53F19 620 aaKnown RBP22.15■■□□□ 1.14
CLCN2-220ENST00000637538 ABCA3Q99758 1704 aa22.14■■□□□ 1.13
CLCN2-220ENST00000637538 ABCC6O95255 1503 aa22.12■■□□□ 1.13
CLCN2-220ENST00000637538 TCP11L2Q8N4U5 519 aa22.12■■□□□ 1.13
CLCN2-220ENST00000637538 PHF23Q9BUL5 403 aaPredicted RBP22.12■■□□□ 1.13
CLCN2-220ENST00000637538 PNNQ9H307 717 aaKnown RBP22.11■■□□□ 1.13
CLCN2-220ENST00000637538 COL18A1P39060 1754 aa22.11■■□□□ 1.13
CLCN2-220ENST00000637538 IGSF1Q8N6C5 1336 aa22.11■■□□□ 1.13
CLCN2-220ENST00000637538 PDE3BQ13370 1112 aa22.11■■□□□ 1.13
CLCN2-220ENST00000637538 SALL2Q9Y467 1007 aaPredicted RBP22.11■■□□□ 1.13
CLCN2-220ENST00000637538 CPDO75976 1380 aa22.1■■□□□ 1.13
CLCN2-220ENST00000637538 SPATA31A6Q5VVP1 1343 aa22.1■■□□□ 1.13
CLCN2-220ENST00000637538 KDRP35968 1356 aa22.09■■□□□ 1.13
CLCN2-220ENST00000637538 HMOX1P09601 288 aa22.09■■□□□ 1.13
CLCN2-220ENST00000637538 PRKAR2BP31323 418 aa22.09■■□□□ 1.13
CLCN2-220ENST00000637538 CABLES1Q8TDN4 633 aa22.09■■□□□ 1.13
CLCN2-220ENST00000637538 COL22A1Q8NFW1 1626 aaPredicted RBP22.08■■□□□ 1.13
CLCN2-220ENST00000637538 CCDC27Q2M243 656 aa22.07■■□□□ 1.12
CLCN2-220ENST00000637538 EYA1Q99502 592 aa22.07■■□□□ 1.12
CLCN2-220ENST00000637538 AEBP1Q8IUX7 1158 aa22.06■■□□□ 1.12
CLCN2-220ENST00000637538 CAMTA1Q9Y6Y1 1673 aa22.06■■□□□ 1.12
CLCN2-220ENST00000637538 ZC3H6P61129 1189 aaKnown RBP22.06■■□□□ 1.12
CLCN2-220ENST00000637538 SULT6B1Q6IMI4 303 aa22.06■■□□□ 1.12
CLCN2-220ENST00000637538 NCAPD2Q15021 1401 aa22.05■■□□□ 1.12
CLCN2-220ENST00000637538 MAPK8IP3Q9UPT6 1336 aa22.05■■□□□ 1.12
CLCN2-220ENST00000637538 PLEKHG5O94827 1062 aa22.05■■□□□ 1.12
CLCN2-220ENST00000637538 TMPOP42166 694 aaKnown RBP22.05■■□□□ 1.12
CLCN2-220ENST00000637538 PHACTR3Q96KR7 559 aa22.05■■□□□ 1.12
CLCN2-220ENST00000637538 AXIN2Q9Y2T1 843 aa22.05■■□□□ 1.12
CLCN2-220ENST00000637538 RGPD5Q99666 1765 aa22.05■■□□□ 1.12
CLCN2-220ENST00000637538 WWC1Q8IX03 1113 aa22.04■■□□□ 1.12
CLCN2-220ENST00000637538 RRP7AQ9Y3A4 280 aaKnown RBP22.04■■□□□ 1.12
CLCN2-220ENST00000637538 LMO7Q8WWI1 1683 aa22.03■■□□□ 1.12
CLCN2-220ENST00000637538 CDCA7LQ96GN5 454 aa22.03■■□□□ 1.12
CLCN2-220ENST00000637538 KIAA0232Q92628 1395 aa22.03■■□□□ 1.12
CLCN2-220ENST00000637538 RGPD2P0DJD1 1756 aa22.01■■□□□ 1.11
CLCN2-220ENST00000637538 ZBTB7CA1YPR0 619 aa22.01■■□□□ 1.11
CLCN2-220ENST00000637538 GOLGA2Q08379 1002 aa22.01■■□□□ 1.11
CLCN2-220ENST00000637538 TRIM35Q9UPQ4 493 aa22.01■■□□□ 1.11
CLCN2-220ENST00000637538 NFE2L2Q16236 605 aa22■■□□□ 1.11
CLCN2-220ENST00000637538 TRMT2AQ8IZ69 625 aaKnown RBP22■■□□□ 1.11
CLCN2-220ENST00000637538 ANKRD24Q8TF21 1146 aa22■■□□□ 1.11
CLCN2-220ENST00000637538 LTV1Q96GA3 475 aaPredicted RBP22■■□□□ 1.11
CLCN2-220ENST00000637538 ERBB3P21860 1342 aa22■■□□□ 1.11
CLCN2-220ENST00000637538 NEUROD2Q15784 382 aa21.99■■□□□ 1.11
CLCN2-220ENST00000637538 NBPF6Q5VWK0 638 aa21.99■■□□□ 1.11
CLCN2-220ENST00000637538 NBPF4Q96M43 638 aa21.99■■□□□ 1.11
CLCN2-220ENST00000637538 SLFN5Q08AF3 891 aa21.98■■□□□ 1.11
CLCN2-220ENST00000637538 WDR63Q8IWG1 891 aa21.98■■□□□ 1.11
CLCN2-220ENST00000637538 FAM208AQ9UK61 1670 aaKnown RBP21.98■■□□□ 1.11
CLCN2-220ENST00000637538 DLG5Q8TDM6 1919 aa21.97■■□□□ 1.11
CLCN2-220ENST00000637538 NEFMP07197 916 aa21.97■■□□□ 1.11
CLCN2-220ENST00000637538 RIPK4P57078 832 aa21.96■■□□□ 1.11
CLCN2-220ENST00000637538 SPINK5Q9NQ38 1064 aaPredicted RBP21.96■■□□□ 1.11
CLCN2-220ENST00000637538 LRP6O75581 1613 aa21.96■■□□□ 1.11
CLCN2-220ENST00000637538 NUTM2BA6NNL0 878 aaPredicted RBP21.96■■□□□ 1.11
CLCN2-220ENST00000637538 NUTM2EB1AL46 878 aaPredicted RBP21.96■■□□□ 1.11
CLCN2-220ENST00000637538 CHRNA2Q15822 529 aa21.96■■□□□ 1.11
CLCN2-220ENST00000637538 DUSP27Q5VZP5 1158 aa21.96■■□□□ 1.11
CLCN2-220ENST00000637538 NUTM2AQ8IVF1 878 aaPredicted RBP21.96■■□□□ 1.11
CLCN2-220ENST00000637538 E9PSI1 815 aa21.94■■□□□ 1.1
CLCN2-220ENST00000637538 RGS17Q9UGC6 210 aaPredicted RBP21.94■■□□□ 1.1
CLCN2-220ENST00000637538 GTF3C3Q9Y5Q9 886 aa21.94■■□□□ 1.1
CLCN2-220ENST00000637538 PRDM11Q9NQV5 511 aa21.93■■□□□ 1.1
CLCN2-220ENST00000637538 MEX3CQ5U5Q3 659 aaKnown RBP21.92■■□□□ 1.1
CLCN2-220ENST00000637538 USHBP1Q8N6Y0 703 aa21.92■■□□□ 1.1
CLCN2-220ENST00000637538 IL16Q14005 1332 aa21.92■■□□□ 1.1
CLCN2-220ENST00000637538 COL5A2P05997 1499 aaPredicted RBP21.91■■□□□ 1.1
CLCN2-220ENST00000637538 HAP1P54257 671 aaPredicted RBP21.9■■□□□ 1.1
CLCN2-220ENST00000637538 COL14A1Q05707 1796 aaKnown RBP21.9■■□□□ 1.1
CLCN2-220ENST00000637538 FAM83GA6ND36 823 aa21.89■■□□□ 1.09
CLCN2-220ENST00000637538 MTHFSDQ2M296 383 aaKnown RBP21.89■■□□□ 1.09
CLCN2-220ENST00000637538 LMOD3Q0VAK6 560 aa21.88■■□□□ 1.09
CLCN2-220ENST00000637538 PLEKHG2Q9H7P9 1386 aa21.87■■□□□ 1.09
CLCN2-220ENST00000637538 ADAMTS2O95450 1211 aa21.86■■□□□ 1.09
CLCN2-220ENST00000637538 GAS2L2Q8NHY3 880 aa21.86■■□□□ 1.09
CLCN2-220ENST00000637538 WDR17Q8IZU2 1322 aa21.86■■□□□ 1.09
CLCN2-220ENST00000637538 RNF123Q5XPI4 1314 aa21.85■■□□□ 1.09
CLCN2-220ENST00000637538 ZNF772Q68DY9 489 aaPredicted RBP21.85■■□□□ 1.09
CLCN2-220ENST00000637538 SUPT16HQ9Y5B9 1047 aaKnown RBP21.85■■□□□ 1.09
CLCN2-220ENST00000637538 C8orf37Q96NL8 207 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms