RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 LRP5O75197 1615 aa26.19■■□□□ 1.78
CLN6-220ENST00000637450 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.19■■□□□ 1.78
CLN6-220ENST00000637450 PARP4Q9UKK3 1724 aaKnown RBP26.19■■□□□ 1.78
CLN6-220ENST00000637450 TMC1Q8TDI8 760 aa26.18■■□□□ 1.78
CLN6-220ENST00000637450 CDCA7Q9BWT1 371 aaPredicted RBP26.18■■□□□ 1.78
CLN6-220ENST00000637450 CARD10Q9BWT7 1032 aa26.18■■□□□ 1.78
CLN6-220ENST00000637450 SLC12A5Q9H2X9 1139 aa26.18■■□□□ 1.78
CLN6-220ENST00000637450 USP31Q70CQ4 1352 aa26.18■■□□□ 1.78
CLN6-220ENST00000637450 PUS7Q96PZ0 661 aaKnown RBP26.17■■□□□ 1.78
CLN6-220ENST00000637450 CD163L1Q9NR16 1453 aa26.17■■□□□ 1.78
CLN6-220ENST00000637450 OVOS2A0A0G2JMS6 1433 aa26.16■■□□□ 1.78
CLN6-220ENST00000637450 OVOS2A0A0J9YW53 1432 aa26.16■■□□□ 1.78
CLN6-220ENST00000637450 OVOS2Q6IE36 1432 aa26.16■■□□□ 1.78
CLN6-220ENST00000637450 CSB-PGBD3P0DP91 1061 aa26.16■■□□□ 1.78
CLN6-220ENST00000637450 HDGFL2Q7Z4V5 671 aaPredicted RBP26.16■■□□□ 1.78
CLN6-220ENST00000637450 NFAT5O94916 1531 aa26.15■■□□□ 1.78
CLN6-220ENST00000637450 NME9Q86XW9 330 aa26.15■■□□□ 1.78
CLN6-220ENST00000637450 NBPF14Q5TI25 921 aa26.13■■□□□ 1.77
CLN6-220ENST00000637450 MARCH10Q8NA82 808 aaPredicted RBP26.13■■□□□ 1.77
CLN6-220ENST00000637450 TERF2IPQ9NYB0 399 aa26.11■■□□□ 1.77
CLN6-220ENST00000637450 PLSCR1O15162 318 aa26.1■■□□□ 1.77
CLN6-220ENST00000637450 TESK2Q96S53 571 aa26.1■■□□□ 1.77
CLN6-220ENST00000637450 BCL11BQ9C0K0 894 aaPredicted RBP26.1■■□□□ 1.77
CLN6-220ENST00000637450 MON2Q7Z3U7 1717 aa26.1■■□□□ 1.77
CLN6-220ENST00000637450 PEAK1Q9H792 1746 aa26.1■■□□□ 1.77
CLN6-220ENST00000637450 EXOC5O00471 708 aa26.09■■□□□ 1.77
CLN6-220ENST00000637450 TRIM26Q12899 539 aaPredicted RBP26.09■■□□□ 1.77
CLN6-220ENST00000637450 LRRC37A3O60309 1634 aa26.09■■□□□ 1.77
CLN6-220ENST00000637450 CCDC7Q96M83 1385 aa26.08■■□□□ 1.77
CLN6-220ENST00000637450 BCL9O00512 1426 aa26.08■■□□□ 1.77
CLN6-220ENST00000637450 EDC4Q6P2E9 1401 aaKnown RBP26.08■■□□□ 1.77
CLN6-220ENST00000637450 ST20-MTHFSA0A0A6YYL1 179 aa26.08■■□□□ 1.77
CLN6-220ENST00000637450 ABCC6O95255 1503 aa26.08■■□□□ 1.77
CLN6-220ENST00000637450 PTF1AQ7RTS3 328 aa26.07■■□□□ 1.76
CLN6-220ENST00000637450 A0A1W2PP64 1363 aa26.07■■□□□ 1.76
CLN6-220ENST00000637450 RREB1Q92766 1687 aa26.06■■□□□ 1.76
CLN6-220ENST00000637450 SLC24A1O60721 1099 aa26.06■■□□□ 1.76
CLN6-220ENST00000637450 ERBB3P21860 1342 aa26.05■■□□□ 1.76
CLN6-220ENST00000637450 RGPD5Q99666 1765 aa26.05■■□□□ 1.76
CLN6-220ENST00000637450 NLRP2Q9NX02 1062 aa26.03■■□□□ 1.76
CLN6-220ENST00000637450 USP54Q70EL1 1684 aa26.03■■□□□ 1.76
CLN6-220ENST00000637450 NUP188Q5SRE5 1749 aa26.02■■□□□ 1.76
CLN6-220ENST00000637450 ANKRD24Q8TF21 1146 aa26.01■■□□□ 1.75
CLN6-220ENST00000637450 NINLQ9Y2I6 1382 aa26.01■■□□□ 1.75
CLN6-220ENST00000637450 PROM2Q8N271 834 aa26■■□□□ 1.75
CLN6-220ENST00000637450 WNK3Q9BYP7 1800 aa25.99■■□□□ 1.75
CLN6-220ENST00000637450 SBF2Q86WG5 1849 aa25.98■■□□□ 1.75
CLN6-220ENST00000637450 IL2RBP14784 551 aa25.97■■□□□ 1.75
CLN6-220ENST00000637450 IP6K1Q92551 441 aa25.97■■□□□ 1.75
CLN6-220ENST00000637450 TNS2Q63HR2 1409 aa25.97■■□□□ 1.75
CLN6-220ENST00000637450 ANO8Q9HCE9 1232 aaPredicted RBP25.95■■□□□ 1.74
CLN6-220ENST00000637450 KCNQ2O43526 872 aa25.94■■□□□ 1.74
CLN6-220ENST00000637450 COG3Q96JB2 828 aa25.94■■□□□ 1.74
CLN6-220ENST00000637450 SPON1Q9HCB6 807 aa25.94■■□□□ 1.74
CLN6-220ENST00000637450 RGPD3A6NKT7 1758 aaPredicted RBP25.94■■□□□ 1.74
CLN6-220ENST00000637450 RGPD4Q7Z3J3 1758 aa25.94■■□□□ 1.74
CLN6-220ENST00000637450 TXNRD1Q16881 649 aa25.92■■□□□ 1.74
CLN6-220ENST00000637450 TMF1P82094 1093 aa25.91■■□□□ 1.74
CLN6-220ENST00000637450 LTN1O94822 1766 aa25.9■■□□□ 1.74
CLN6-220ENST00000637450 ACSBG1Q96GR2 724 aa25.9■■□□□ 1.74
CLN6-220ENST00000637450 ANKRD36BQ8N2N9 1353 aa25.9■■□□□ 1.74
CLN6-220ENST00000637450 FBLN1P23142 703 aa25.89■■□□□ 1.74
CLN6-220ENST00000637450 USP47Q96K76 1375 aa25.89■■□□□ 1.74
CLN6-220ENST00000637450 MAP3K19Q56UN5 1328 aa25.88■■□□□ 1.73
CLN6-220ENST00000637450 LTV1Q96GA3 475 aaPredicted RBP25.88■■□□□ 1.73
CLN6-220ENST00000637450 HOXC9P31274 260 aa25.87■■□□□ 1.73
CLN6-220ENST00000637450 FYB1O15117 783 aa25.86■■□□□ 1.73
CLN6-220ENST00000637450 AMPHP49418 695 aa25.85■■□□□ 1.73
CLN6-220ENST00000637450 PDGFDQ9GZP0 370 aaPredicted RBP25.85■■□□□ 1.73
CLN6-220ENST00000637450 STK32BQ9NY57 414 aa25.85■■□□□ 1.73
CLN6-220ENST00000637450 PPP1R1BQ9UD71 204 aaPredicted RBP25.85■■□□□ 1.73
CLN6-220ENST00000637450 SLC15A2Q16348 729 aa25.84■■□□□ 1.73
CLN6-220ENST00000637450 CDCA8Q53HL2 280 aa25.83■■□□□ 1.73
CLN6-220ENST00000637450 GGNBP2Q9H3C7 697 aa25.82■■□□□ 1.72
CLN6-220ENST00000637450 TIMELESSQ9UNS1 1208 aa25.82■■□□□ 1.72
CLN6-220ENST00000637450 DDX54Q8TDD1 881 aaKnown RBP25.81■■□□□ 1.72
CLN6-220ENST00000637450 RRS1Q15050 365 aaKnown RBP25.8■■□□□ 1.72
CLN6-220ENST00000637450 ZBTB7AO95365 584 aa25.79■■□□□ 1.72
CLN6-220ENST00000637450 NHSQ6T4R5 1651 aa25.79■■□□□ 1.72
CLN6-220ENST00000637450 RTL1A6NKG5 1358 aa25.77■■□□□ 1.72
CLN6-220ENST00000637450 CASZ1Q86V15 1759 aa25.76■■□□□ 1.71
CLN6-220ENST00000637450 PTGER2P43116 358 aa25.75■■□□□ 1.71
CLN6-220ENST00000637450 NBPF6Q5VWK0 638 aa25.75■■□□□ 1.71
CLN6-220ENST00000637450 ZCRB1Q8TBF4 217 aaKnown RBP25.75■■□□□ 1.71
CLN6-220ENST00000637450 NBPF4Q96M43 638 aa25.75■■□□□ 1.71
CLN6-220ENST00000637450 ATF5Q9Y2D1 282 aaPredicted RBP25.75■■□□□ 1.71
CLN6-220ENST00000637450 LRRC4BQ9NT99 713 aa25.74■■□□□ 1.71
CLN6-220ENST00000637450 CLSPNQ9HAW4 1339 aa25.73■■□□□ 1.71
CLN6-220ENST00000637450 CARD14Q9BXL6 1004 aa25.73■■□□□ 1.71
CLN6-220ENST00000637450 FAM208AQ9UK61 1670 aaKnown RBP25.73■■□□□ 1.71
CLN6-220ENST00000637450 PRIM1P49642 420 aaKnown RBP25.71■■□□□ 1.71
CLN6-220ENST00000637450 MTFR1LQ9H019 292 aa25.71■■□□□ 1.71
CLN6-220ENST00000637450 HSP90AB2PQ58FF8 381 aa25.7■■□□□ 1.7
CLN6-220ENST00000637450 PCGF6Q9BYE7 350 aa25.7■■□□□ 1.7
CLN6-220ENST00000637450 ZNF827Q17R98 1081 aa25.69■■□□□ 1.7
CLN6-220ENST00000637450 SLC27A3Q5K4L6 730 aa25.69■■□□□ 1.7
CLN6-220ENST00000637450 USHBP1Q8N6Y0 703 aa25.69■■□□□ 1.7
CLN6-220ENST00000637450 BTAF1O14981 1849 aa25.69■■□□□ 1.7
CLN6-220ENST00000637450 INSRP06213 1382 aa25.69■■□□□ 1.7
CLN6-220ENST00000637450 MEGF6O75095 1541 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms