RNA–Protein interactions for RNA: ENST00000637354.1

PTPRD-215, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5

Gene PTPRD, Length 891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-215ENST00000637354 ZNF511Q8NB15 262 aa8.91□□□□□ -0.98
PTPRD-215ENST00000637354 H3BM21 787 aa8.9□□□□□ -0.98
PTPRD-215ENST00000637354 PRR7Q8TB68 274 aa8.9□□□□□ -0.98
PTPRD-215ENST00000637354 TBC1D2BQ9UPU7 963 aa8.9□□□□□ -0.98
PTPRD-215ENST00000637354 CCDC97Q96F63 343 aaPredicted RBP8.89□□□□□ -0.99
PTPRD-215ENST00000637354 CECR2Q9BXF3 1484 aa8.89□□□□□ -0.99
PTPRD-215ENST00000637354 CTDSPL2Q05D32 466 aa8.88□□□□□ -0.99
PTPRD-215ENST00000637354 HELBQ8NG08 1087 aaPredicted RBP8.88□□□□□ -0.99
PTPRD-215ENST00000637354 BAP1Q92560 729 aa8.88□□□□□ -0.99
PTPRD-215ENST00000637354 TLL2Q9Y6L7 1015 aa8.88□□□□□ -0.99
PTPRD-215ENST00000637354 ADH1CP00326 375 aa8.87□□□□□ -0.99
PTPRD-215ENST00000637354 GMPRP36959 345 aa8.87□□□□□ -0.99
PTPRD-215ENST00000637354 NNTQ13423 1086 aa8.87□□□□□ -0.99
PTPRD-215ENST00000637354 SCARF1Q14162 830 aa8.87□□□□□ -0.99
PTPRD-215ENST00000637354 LINC01559Q495D7 138 aa8.87□□□□□ -0.99
PTPRD-215ENST00000637354 ZSCAN1Q8NBB4 408 aa8.87□□□□□ -0.99
PTPRD-215ENST00000637354 ZFP42Q96MM3 310 aa8.87□□□□□ -0.99
PTPRD-215ENST00000637354 FAM174AQ8TBP5 190 aa8.86□□□□□ -0.99
PTPRD-215ENST00000637354 SERPINA10Q9UK55 444 aa8.86□□□□□ -0.99
PTPRD-215ENST00000637354 CFAP99D6REC4 459 aa8.85□□□□□ -0.99
PTPRD-215ENST00000637354 MRPL14Q6P1L8 145 aaKnown RBP8.85□□□□□ -0.99
PTPRD-215ENST00000637354 HMX1Q9NP08 348 aaPredicted RBP8.85□□□□□ -0.99
PTPRD-215ENST00000637354 NDUFB9Q9Y6M9 179 aa8.85□□□□□ -0.99
PTPRD-215ENST00000637354 SOCS7O14512 581 aa8.84□□□□□ -0.99
PTPRD-215ENST00000637354 TIMP2P16035 220 aa8.84□□□□□ -0.99
PTPRD-215ENST00000637354 LYPD8Q6UX82 237 aa8.84□□□□□ -0.99
PTPRD-215ENST00000637354 LRRN4Q8WUT4 740 aa8.84□□□□□ -0.99
PTPRD-215ENST00000637354 GJD4Q96KN9 370 aaPredicted RBP8.84□□□□□ -0.99
PTPRD-215ENST00000637354 POM121CA8CG34 1229 aa8.83□□□□□ -1
PTPRD-215ENST00000637354 CDK15Q96Q40 435 aa8.83□□□□□ -1
PTPRD-215ENST00000637354 VSIG8P0DPA2 414 aa8.82□□□□□ -1
PTPRD-215ENST00000637354 LORP23490 312 aaPredicted RBP8.82□□□□□ -1
PTPRD-215ENST00000637354 WDR4P57081 412 aaKnown RBP8.82□□□□□ -1
PTPRD-215ENST00000637354 CALR3Q96L12 384 aaKnown RBP8.82□□□□□ -1
PTPRD-215ENST00000637354 SMARCA4P51532 1647 aa8.81□□□□□ -1
PTPRD-215ENST00000637354 CTHP32929 405 aa8.81□□□□□ -1
PTPRD-215ENST00000637354 NR5A1Q13285 461 aa8.8□□□□□ -1
PTPRD-215ENST00000637354 GLMNQ92990 594 aa8.8□□□□□ -1
PTPRD-215ENST00000637354 KLF16Q9BXK1 252 aaPredicted RBP8.8□□□□□ -1
PTPRD-215ENST00000637354 ERBB4Q15303 1308 aa8.8□□□□□ -1
PTPRD-215ENST00000637354 F12P00748 615 aaPredicted RBP8.79□□□□□ -1
PTPRD-215ENST00000637354 PURBQ96QR8 312 aaKnown RBP8.79□□□□□ -1
PTPRD-215ENST00000637354 TRIM34Q9BYJ4 488 aa8.79□□□□□ -1
PTPRD-215ENST00000637354 MROH2BQ7Z745 1585 aa8.78□□□□□ -1
PTPRD-215ENST00000637354 VEGFBP49765 207 aa8.78□□□□□ -1
PTPRD-215ENST00000637354 IRF5Q13568 498 aa8.78□□□□□ -1
PTPRD-215ENST00000637354 EPS8L1Q8TE68 723 aa8.78□□□□□ -1
PTPRD-215ENST00000637354 PER1O15534 1290 aaPredicted RBP8.77□□□□□ -1.01
PTPRD-215ENST00000637354 PDIA4P13667 645 aaKnown RBP8.77□□□□□ -1.01
PTPRD-215ENST00000637354 VAC14Q08AM6 782 aa8.77□□□□□ -1.01
PTPRD-215ENST00000637354 NR6A1Q15406 480 aa8.77□□□□□ -1.01
PTPRD-215ENST00000637354 BPHLQ86WA6 291 aaPredicted RBP8.77□□□□□ -1.01
PTPRD-215ENST00000637354 WASHC4Q2M389 1173 aa8.76□□□□□ -1.01
PTPRD-215ENST00000637354 ARMC2Q8NEN0 867 aa8.76□□□□□ -1.01
PTPRD-215ENST00000637354 UPP2O95045 317 aa8.75□□□□□ -1.01
PTPRD-215ENST00000637354 HDGFL1Q5TGJ6 251 aa8.75□□□□□ -1.01
PTPRD-215ENST00000637354 BAZ1AQ9NRL2 1556 aaPredicted RBP8.74□□□□□ -1.01
PTPRD-215ENST00000637354 ZIC2O95409 532 aaPredicted RBP8.74□□□□□ -1.01
PTPRD-215ENST00000637354 FOXJ1Q92949 421 aa8.74□□□□□ -1.01
PTPRD-215ENST00000637354 MAP10Q9P2G4 905 aa8.74□□□□□ -1.01
PTPRD-215ENST00000637354 ATAD2BQ9ULI0 1458 aa8.74□□□□□ -1.01
PTPRD-215ENST00000637354 MAN1A2O60476 641 aa8.73□□□□□ -1.01
PTPRD-215ENST00000637354 TRIM26Q12899 539 aaPredicted RBP8.73□□□□□ -1.01
PTPRD-215ENST00000637354 ITPKCQ96DU7 683 aa8.73□□□□□ -1.01
PTPRD-215ENST00000637354 PODXL2Q9NZ53 605 aa8.73□□□□□ -1.01
PTPRD-215ENST00000637354 MAP4K5Q9Y4K4 846 aa8.73□□□□□ -1.01
PTPRD-215ENST00000637354 GPR37L1O60883 481 aa8.72□□□□□ -1.01
PTPRD-215ENST00000637354 ARID5BQ14865 1188 aa8.72□□□□□ -1.01
PTPRD-215ENST00000637354 AGERQ15109 404 aa8.72□□□□□ -1.01
PTPRD-215ENST00000637354 NBPF14Q5TI25 921 aa8.72□□□□□ -1.01
PTPRD-215ENST00000637354 MEIOBQ8N635 442 aa8.72□□□□□ -1.01
PTPRD-215ENST00000637354 C1QTNF2Q9BXJ5 285 aa8.72□□□□□ -1.01
PTPRD-215ENST00000637354 LINC00528Q8N1L1 170 aa8.71□□□□□ -1.02
PTPRD-215ENST00000637354 ADAMTS19Q8TE59 1207 aa8.71□□□□□ -1.02
PTPRD-215ENST00000637354 ZFAND3Q9H8U3 227 aa8.71□□□□□ -1.02
PTPRD-215ENST00000637354 WIZO95785 1651 aa8.71□□□□□ -1.02
PTPRD-215ENST00000637354 NCAPD3P42695 1498 aa8.7□□□□□ -1.02
PTPRD-215ENST00000637354 NR3C2P08235 984 aa8.7□□□□□ -1.02
PTPRD-215ENST00000637354 GRM5P41594 1212 aa8.7□□□□□ -1.02
PTPRD-215ENST00000637354 C4orf48Q5BLP8 95 aa8.7□□□□□ -1.02
PTPRD-215ENST00000637354 TRMT44Q8IYL2 757 aaKnown RBP8.7□□□□□ -1.02
PTPRD-215ENST00000637354 RFX1P22670 979 aa8.69□□□□□ -1.02
PTPRD-215ENST00000637354 SH3RF1Q7Z6J0 888 aa8.69□□□□□ -1.02
PTPRD-215ENST00000637354 PNMA1Q8ND90 353 aa8.69□□□□□ -1.02
PTPRD-215ENST00000637354 GPKOWQ92917 476 aaPredicted RBP eCLIP8.69□□□□□ -1.02
PTPRD-215ENST00000637354 SMARCA2P51531 1590 aa8.69□□□□□ -1.02
PTPRD-215ENST00000637354 SOBPA7XYQ1 873 aa8.68□□□□□ -1.02
PTPRD-215ENST00000637354 BMP2P12643 396 aa8.68□□□□□ -1.02
PTPRD-215ENST00000637354 C6orf118Q5T5N4 469 aa8.68□□□□□ -1.02
PTPRD-215ENST00000637354 TSEN34Q9BSV6 310 aaKnown RBP8.68□□□□□ -1.02
PTPRD-215ENST00000637354 EMILIN1Q9Y6C2 1016 aa8.68□□□□□ -1.02
PTPRD-215ENST00000637354 PEG3Q9GZU2 1588 aa8.68□□□□□ -1.02
PTPRD-215ENST00000637354 PPFIA3O75145 1194 aa8.67□□□□□ -1.02
PTPRD-215ENST00000637354 SOS2Q07890 1332 aaPredicted RBP8.67□□□□□ -1.02
PTPRD-215ENST00000637354 HMGXB3Q12766 1538 aa8.67□□□□□ -1.02
PTPRD-215ENST00000637354 SEMA3FQ13275 785 aa8.67□□□□□ -1.02
PTPRD-215ENST00000637354 ACIN1Q9UKV3 1341 aaKnown RBP8.67□□□□□ -1.02
PTPRD-215ENST00000637354 BAZ1BQ9UIG0 1483 aaKnown RBP8.66□□□□□ -1.02
PTPRD-215ENST00000637354 FSHRP23945 695 aa8.66□□□□□ -1.02
PTPRD-215ENST00000637354 RETREG2Q8NC44 543 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms