RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 PCDHB15Q9Y5E8 787 aa15.44■□□□□ 0.06
CLN8-212ENST00000637083 HMOX1P09601 288 aa15.43■□□□□ 0.06
CLN8-212ENST00000637083 TRIM27P14373 513 aa15.43■□□□□ 0.06
CLN8-212ENST00000637083 RTL5Q5HYW3 569 aaPredicted RBP15.43■□□□□ 0.06
CLN8-212ENST00000637083 TTC21BQ7Z4L5 1316 aa15.43■□□□□ 0.06
CLN8-212ENST00000637083 DIP2AQ14689 1571 aa15.43■□□□□ 0.06
CLN8-212ENST00000637083 NOB1Q9ULX3 412 aaKnown RBP15.43■□□□□ 0.06
CLN8-212ENST00000637083 AMOTL2Q9Y2J4 779 aa15.43■□□□□ 0.06
CLN8-212ENST00000637083 TOPAZ1Q8N9V7 1692 aa15.42■□□□□ 0.06
CLN8-212ENST00000637083 TNNQ9UQP3 1299 aa15.42■□□□□ 0.06
CLN8-212ENST00000637083 ACEP12821 1306 aa15.42■□□□□ 0.06
CLN8-212ENST00000637083 PTPRUQ92729 1446 aa15.42■□□□□ 0.06
CLN8-212ENST00000637083 HDAC1Q13547 482 aaPredicted RBP15.41■□□□□ 0.06
CLN8-212ENST00000637083 PTCH1Q13635 1447 aa15.41■□□□□ 0.06
CLN8-212ENST00000637083 ITPRIPQ8IWB1 547 aa15.41■□□□□ 0.06
CLN8-212ENST00000637083 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.41■□□□□ 0.06
CLN8-212ENST00000637083 TTC21AQ8NDW8 1320 aa15.41■□□□□ 0.06
CLN8-212ENST00000637083 HAP1P54257 671 aaPredicted RBP15.41■□□□□ 0.06
CLN8-212ENST00000637083 AEBP2Q6ZN18 517 aaPredicted RBP15.41■□□□□ 0.06
CLN8-212ENST00000637083 ARHGAP45Q92619 1136 aa15.41■□□□□ 0.06
CLN8-212ENST00000637083 PHACTR3Q96KR7 559 aa15.41■□□□□ 0.06
CLN8-212ENST00000637083 USP6P35125 1406 aa15.4■□□□□ 0.06
CLN8-212ENST00000637083 NUTM2FA1L443 756 aa15.4■□□□□ 0.06
CLN8-212ENST00000637083 LAS1LQ9Y4W2 734 aaKnown RBP15.4■□□□□ 0.06
CLN8-212ENST00000637083 NRKQ7Z2Y5 1582 aa15.4■□□□□ 0.06
CLN8-212ENST00000637083 VIRMAQ69YN4 1812 aaKnown RBP15.4■□□□□ 0.06
CLN8-212ENST00000637083 RRS1Q15050 365 aaKnown RBP15.39■□□□□ 0.05
CLN8-212ENST00000637083 USP35Q9P2H5 1018 aa15.39■□□□□ 0.05
CLN8-212ENST00000637083 PDZRN3Q9UPQ7 1066 aa15.39■□□□□ 0.05
CLN8-212ENST00000637083 ZNF853P0CG23 659 aa15.39■□□□□ 0.05
CLN8-212ENST00000637083 OVOS2A0A0J9YW53 1432 aa15.39■□□□□ 0.05
CLN8-212ENST00000637083 OVOS2Q6IE36 1432 aa15.39■□□□□ 0.05
CLN8-212ENST00000637083 NBR1Q14596 966 aa15.38■□□□□ 0.05
CLN8-212ENST00000637083 CFAP44Q96MT7 982 aa15.38■□□□□ 0.05
CLN8-212ENST00000637083 UPF2Q9HAU5 1272 aaKnown RBP15.38■□□□□ 0.05
CLN8-212ENST00000637083 FER1L4A9Z1Z3 1794 aa15.38■□□□□ 0.05
CLN8-212ENST00000637083 USP31Q70CQ4 1352 aa15.37■□□□□ 0.05
CLN8-212ENST00000637083 VAMP4O75379 141 aa15.36■□□□□ 0.05
CLN8-212ENST00000637083 TMEM57Q8N5G2 664 aa15.36■□□□□ 0.05
CLN8-212ENST00000637083 PIK3R4Q99570 1358 aa15.36■□□□□ 0.05
CLN8-212ENST00000637083 ZBTB40Q9NUA8 1239 aa15.36■□□□□ 0.05
CLN8-212ENST00000637083 EIF4A2Q14240 407 aaKnown RBP15.34■□□□□ 0.05
CLN8-212ENST00000637083 MRPL50Q8N5N7 158 aaKnown RBP15.34■□□□□ 0.05
CLN8-212ENST00000637083 MBIPQ9NS73 344 aa15.34■□□□□ 0.05
CLN8-212ENST00000637083 NALCNQ8IZF0 1738 aa15.34■□□□□ 0.05
CLN8-212ENST00000637083 SSH2Q76I76 1423 aa15.34■□□□□ 0.05
CLN8-212ENST00000637083 TWISTNBQ3B726 338 aaPredicted RBP15.34■□□□□ 0.05
CLN8-212ENST00000637083 ANKARQ7Z5J8 1434 aa15.33■□□□□ 0.05
CLN8-212ENST00000637083 SMC5Q8IY18 1101 aa15.33■□□□□ 0.04
CLN8-212ENST00000637083 API5Q9BZZ5 524 aaKnown RBP15.33■□□□□ 0.04
CLN8-212ENST00000637083 SULT6B1Q6IMI4 303 aa15.33■□□□□ 0.04
CLN8-212ENST00000637083 NGDNQ8NEJ9 315 aaKnown RBP15.33■□□□□ 0.04
CLN8-212ENST00000637083 BECN1Q14457 450 aa15.32■□□□□ 0.04
CLN8-212ENST00000637083 RIMS1Q86UR5 1692 aaKnown RBP15.32■□□□□ 0.04
CLN8-212ENST00000637083 THUMPD2Q9BTF0 503 aaKnown RBP15.31■□□□□ 0.04
CLN8-212ENST00000637083 ARHGEF10O15013 1369 aa15.31■□□□□ 0.04
CLN8-212ENST00000637083 SBNO1A3KN83 1393 aa15.3■□□□□ 0.04
CLN8-212ENST00000637083 KIF24Q5T7B8 1368 aa15.3■□□□□ 0.04
CLN8-212ENST00000637083 DLG5Q8TDM6 1919 aa15.3■□□□□ 0.04
CLN8-212ENST00000637083 KCNA6P17658 529 aa15.3■□□□□ 0.04
CLN8-212ENST00000637083 XRN1Q8IZH2 1706 aaKnown RBP15.3■□□□□ 0.04
CLN8-212ENST00000637083 FLT4P35916 1363 aa15.3■□□□□ 0.04
CLN8-212ENST00000637083 GCC1Q96CN9 775 aa15.29■□□□□ 0.04
CLN8-212ENST00000637083 ZBTB7BO15156 539 aaPredicted RBP15.28■□□□□ 0.04
CLN8-212ENST00000637083 TSPYL6Q8N831 410 aa15.28■□□□□ 0.04
CLN8-212ENST00000637083 ABCC4O15439 1325 aa15.28■□□□□ 0.04
CLN8-212ENST00000637083 KIAA0232Q92628 1395 aa15.28■□□□□ 0.04
CLN8-212ENST00000637083 HSP90AB2PQ58FF8 381 aa15.27■□□□□ 0.04
CLN8-212ENST00000637083 USP19O94966 1318 aa15.27■□□□□ 0.04
CLN8-212ENST00000637083 RGPD1P0DJD0 1748 aa15.27■□□□□ 0.04
CLN8-212ENST00000637083 CHL1O00533 1208 aa15.26■□□□□ 0.03
CLN8-212ENST00000637083 AMPHP49418 695 aa15.26■□□□□ 0.03
CLN8-212ENST00000637083 NUCB1Q02818 461 aa15.26■□□□□ 0.03
CLN8-212ENST00000637083 AEBP1Q8IUX7 1158 aa15.26■□□□□ 0.03
CLN8-212ENST00000637083 C8orf58Q8NAV2 365 aa15.26■□□□□ 0.03
CLN8-212ENST00000637083 CEP170BQ9Y4F5 1589 aaPredicted RBP15.26■□□□□ 0.03
CLN8-212ENST00000637083 FAM83GA6ND36 823 aa15.26■□□□□ 0.03
CLN8-212ENST00000637083 ELL2O00472 640 aaPredicted RBP15.26■□□□□ 0.03
CLN8-212ENST00000637083 DEKP35659 375 aaKnown RBP15.26■□□□□ 0.03
CLN8-212ENST00000637083 ANKLE2Q86XL3 938 aa15.26■□□□□ 0.03
CLN8-212ENST00000637083 RTF1Q92541 710 aaKnown RBP15.26■□□□□ 0.03
CLN8-212ENST00000637083 MAP3K19Q56UN5 1328 aa15.26■□□□□ 0.03
CLN8-212ENST00000637083 PEAK1Q9H792 1746 aa15.26■□□□□ 0.03
CLN8-212ENST00000637083 SOX12O15370 315 aa15.25■□□□□ 0.03
CLN8-212ENST00000637083 GAS2L2Q8NHY3 880 aa15.24■□□□□ 0.03
CLN8-212ENST00000637083 HTATSF1O43719 755 aaKnown RBP15.24■□□□□ 0.03
CLN8-212ENST00000637083 SEC24BO95487 1268 aa15.24■□□□□ 0.03
CLN8-212ENST00000637083 DCTN1Q14203 1278 aa15.24■□□□□ 0.03
CLN8-212ENST00000637083 TBC1D32Q96NH3 1257 aa15.24■□□□□ 0.03
CLN8-212ENST00000637083 FMN2Q9NZ56 1722 aa15.24■□□□□ 0.03
CLN8-212ENST00000637083 KDRP35968 1356 aa15.23■□□□□ 0.03
CLN8-212ENST00000637083 NLRP6P59044 892 aa15.23■□□□□ 0.03
CLN8-212ENST00000637083 CHD1LQ86WJ1 897 aa15.23■□□□□ 0.03
CLN8-212ENST00000637083 PTPRCP08575 1304 aa15.23■□□□□ 0.03
CLN8-212ENST00000637083 EIF5BO60841 1220 aaKnown RBP15.22■□□□□ 0.03
CLN8-212ENST00000637083 SLC4A3P48751 1232 aa15.22■□□□□ 0.03
CLN8-212ENST00000637083 IGSF1Q8N6C5 1336 aa15.22■□□□□ 0.03
CLN8-212ENST00000637083 USP54Q70EL1 1684 aa15.21■□□□□ 0.03
CLN8-212ENST00000637083 INTS3Q68E01 1043 aaKnown RBP15.21■□□□□ 0.03
CLN8-212ENST00000637083 PIK3C2AO00443 1686 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms