RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 KRT28Q7Z3Y7 464 aa10.97□□□□□ -0.65
CACNA1A-232ENST00000636966 COL16A1Q07092 1604 aaPredicted RBP10.97□□□□□ -0.65
CACNA1A-232ENST00000636966 ROBO1Q9Y6N7 1651 aa10.97□□□□□ -0.65
CACNA1A-232ENST00000636966 USP31Q70CQ4 1352 aa10.97□□□□□ -0.65
CACNA1A-232ENST00000636966 SIPA1L3O60292 1781 aaPredicted RBP10.96□□□□□ -0.65
CACNA1A-232ENST00000636966 SOX12O15370 315 aa10.96□□□□□ -0.65
CACNA1A-232ENST00000636966 ABTB2Q8N961 1025 aa10.96□□□□□ -0.65
CACNA1A-232ENST00000636966 LTN1O94822 1766 aa10.96□□□□□ -0.65
CACNA1A-232ENST00000636966 PLEKHG5O94827 1062 aa10.95□□□□□ -0.66
CACNA1A-232ENST00000636966 TTC21AQ8NDW8 1320 aa10.95□□□□□ -0.66
CACNA1A-232ENST00000636966 NLRP6P59044 892 aa10.94□□□□□ -0.66
CACNA1A-232ENST00000636966 PKD1L3Q7Z443 1732 aa10.94□□□□□ -0.66
CACNA1A-232ENST00000636966 NWD2Q9ULI1 1742 aa10.94□□□□□ -0.66
CACNA1A-232ENST00000636966 PNPLA6Q8IY17 1366 aa10.94□□□□□ -0.66
CACNA1A-232ENST00000636966 COG3Q96JB2 828 aa10.94□□□□□ -0.66
CACNA1A-232ENST00000636966 SOS2Q07890 1332 aaPredicted RBP10.94□□□□□ -0.66
CACNA1A-232ENST00000636966 N4BP2Q86UW6 1770 aaPredicted RBP10.94□□□□□ -0.66
CACNA1A-232ENST00000636966 CABLES1Q8TDN4 633 aa10.94□□□□□ -0.66
CACNA1A-232ENST00000636966 ADAMTS8Q9UP79 889 aa10.93□□□□□ -0.66
CACNA1A-232ENST00000636966 AATKQ6ZMQ8 1374 aa10.93□□□□□ -0.66
CACNA1A-232ENST00000636966 MAP3K19Q56UN5 1328 aa10.92□□□□□ -0.66
CACNA1A-232ENST00000636966 SPATA31A3Q5VYP0 1347 aa10.92□□□□□ -0.66
CACNA1A-232ENST00000636966 SALL2Q9Y467 1007 aaPredicted RBP10.92□□□□□ -0.66
CACNA1A-232ENST00000636966 ZNF831Q5JPB2 1677 aa10.92□□□□□ -0.66
CACNA1A-232ENST00000636966 NPHP3Q7Z494 1330 aa10.92□□□□□ -0.66
CACNA1A-232ENST00000636966 CDK12Q9NYV4 1490 aaPredicted RBP10.91□□□□□ -0.66
CACNA1A-232ENST00000636966 PPM1GO15355 546 aaPredicted RBP10.91□□□□□ -0.66
CACNA1A-232ENST00000636966 HSP90AB2PQ58FF8 381 aa10.91□□□□□ -0.66
CACNA1A-232ENST00000636966 EP400Q96L91 3159 aa10.91□□□□□ -0.66
CACNA1A-232ENST00000636966 USP19O94966 1318 aa10.91□□□□□ -0.66
CACNA1A-232ENST00000636966 TNS3Q68CZ2 1445 aa10.91□□□□□ -0.66
CACNA1A-232ENST00000636966 SBNO1A3KN83 1393 aa10.9□□□□□ -0.66
CACNA1A-232ENST00000636966 PIP4K2BP78356 416 aa10.9□□□□□ -0.66
CACNA1A-232ENST00000636966 LMOD2Q6P5Q4 547 aa10.9□□□□□ -0.66
CACNA1A-232ENST00000636966 PAPPAQ13219 1627 aa10.9□□□□□ -0.66
CACNA1A-232ENST00000636966 GCP02774 474 aa10.9□□□□□ -0.67
CACNA1A-232ENST00000636966 MYCNP04198 464 aaPredicted RBP10.9□□□□□ -0.67
CACNA1A-232ENST00000636966 AXIN2Q9Y2T1 843 aa10.9□□□□□ -0.67
CACNA1A-232ENST00000636966 CERKQ8TCT0 537 aa10.89□□□□□ -0.67
CACNA1A-232ENST00000636966 IL13P35225 146 aa10.88□□□□□ -0.67
CACNA1A-232ENST00000636966 CCDC146Q8IYE0 955 aa10.87□□□□□ -0.67
CACNA1A-232ENST00000636966 BLMP54132 1417 aaPredicted RBP10.87□□□□□ -0.67
CACNA1A-232ENST00000636966 UBAP1LF5GYI3 381 aa10.87□□□□□ -0.67
CACNA1A-232ENST00000636966 EIF4A2Q14240 407 aaKnown RBP10.87□□□□□ -0.67
CACNA1A-232ENST00000636966 ARHGEF25Q86VW2 580 aa10.86□□□□□ -0.67
CACNA1A-232ENST00000636966 RGPD5Q99666 1765 aa10.86□□□□□ -0.67
CACNA1A-232ENST00000636966 HOXC9P31274 260 aa10.86□□□□□ -0.67
CACNA1A-232ENST00000636966 ZC3H6P61129 1189 aaKnown RBP10.86□□□□□ -0.67
CACNA1A-232ENST00000636966 PLEKHF1Q96S99 279 aa10.85□□□□□ -0.67
CACNA1A-232ENST00000636966 ZBED9Q6R2W3 1325 aa10.85□□□□□ -0.67
CACNA1A-232ENST00000636966 PHLPP1O60346 1717 aa10.85□□□□□ -0.67
CACNA1A-232ENST00000636966 AEBP1Q8IUX7 1158 aa10.85□□□□□ -0.67
CACNA1A-232ENST00000636966 U3KPZ7 1027 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-232ENST00000636966 RGPD2P0DJD1 1756 aa10.84□□□□□ -0.67
CACNA1A-232ENST00000636966 TOM1O60784 492 aa10.84□□□□□ -0.67
CACNA1A-232ENST00000636966 CHRNA2Q15822 529 aa10.84□□□□□ -0.67
CACNA1A-232ENST00000636966 KIAA0232Q92628 1395 aa10.83□□□□□ -0.67
CACNA1A-232ENST00000636966 ATF5Q9Y2D1 282 aaPredicted RBP10.83□□□□□ -0.68
CACNA1A-232ENST00000636966 DIAPH1O60610 1272 aaKnown RBP10.83□□□□□ -0.68
CACNA1A-232ENST00000636966 HMOX1P09601 288 aa10.83□□□□□ -0.68
CACNA1A-232ENST00000636966 FLT4P35916 1363 aa10.83□□□□□ -0.68
CACNA1A-232ENST00000636966 PHACTR3Q96KR7 559 aa10.83□□□□□ -0.68
CACNA1A-232ENST00000636966 GLI3P10071 1580 aa10.83□□□□□ -0.68
CACNA1A-232ENST00000636966 ARHGEF10O15013 1369 aa10.82□□□□□ -0.68
CACNA1A-232ENST00000636966 U2SURPO15042 1029 aaKnown RBP10.82□□□□□ -0.68
CACNA1A-232ENST00000636966 RSPH6AQ9H0K4 717 aa10.82□□□□□ -0.68
CACNA1A-232ENST00000636966 DLG5Q8TDM6 1919 aa10.82□□□□□ -0.68
CACNA1A-232ENST00000636966 RREB1Q92766 1687 aa10.82□□□□□ -0.68
CACNA1A-232ENST00000636966 ZBTB7CA1YPR0 619 aa10.82□□□□□ -0.68
CACNA1A-232ENST00000636966 U2AF1L5P0DN76 240 aaPredicted RBP10.82□□□□□ -0.68
CACNA1A-232ENST00000636966 U2AF1Q01081 240 aaKnown RBP eCLIP10.82□□□□□ -0.68
CACNA1A-232ENST00000636966 TSHZ2Q9NRE2 1034 aa10.82□□□□□ -0.68
CACNA1A-232ENST00000636966 IP6K1Q92551 441 aa10.81□□□□□ -0.68
CACNA1A-232ENST00000636966 LRRC59Q96AG4 307 aaKnown RBP10.81□□□□□ -0.68
CACNA1A-232ENST00000636966 EYA1Q99502 592 aa10.81□□□□□ -0.68
CACNA1A-232ENST00000636966 PPP4R2Q9NY27 417 aa10.81□□□□□ -0.68
CACNA1A-232ENST00000636966 KIF24Q5T7B8 1368 aa10.81□□□□□ -0.68
CACNA1A-232ENST00000636966 KCNH5Q8NCM2 988 aa10.81□□□□□ -0.68
CACNA1A-232ENST00000636966 COL14A1Q05707 1796 aaKnown RBP10.81□□□□□ -0.68
CACNA1A-232ENST00000636966 FAM83GA6ND36 823 aa10.81□□□□□ -0.68
CACNA1A-232ENST00000636966 AMPHP49418 695 aa10.81□□□□□ -0.68
CACNA1A-232ENST00000636966 WDR43Q15061 677 aaKnown RBP eCLIP10.81□□□□□ -0.68
CACNA1A-232ENST00000636966 USHBP1Q8N6Y0 703 aa10.81□□□□□ -0.68
CACNA1A-232ENST00000636966 LTV1Q96GA3 475 aaPredicted RBP10.81□□□□□ -0.68
CACNA1A-232ENST00000636966 NBPF6Q5VWK0 638 aa10.8□□□□□ -0.68
CACNA1A-232ENST00000636966 NBPF4Q96M43 638 aa10.8□□□□□ -0.68
CACNA1A-232ENST00000636966 LRP6O75581 1613 aa10.8□□□□□ -0.68
CACNA1A-232ENST00000636966 UBR2Q8IWV8 1755 aa10.8□□□□□ -0.68
CACNA1A-232ENST00000636966 APAF1O14727 1248 aa10.8□□□□□ -0.68
CACNA1A-232ENST00000636966 RRP7AQ9Y3A4 280 aaKnown RBP10.8□□□□□ -0.68
CACNA1A-232ENST00000636966 RGPD3A6NKT7 1758 aaPredicted RBP10.8□□□□□ -0.68
CACNA1A-232ENST00000636966 RGPD4Q7Z3J3 1758 aa10.8□□□□□ -0.68
CACNA1A-232ENST00000636966 CPDO75976 1380 aa10.8□□□□□ -0.68
CACNA1A-232ENST00000636966 CFAP53Q96M91 514 aa10.79□□□□□ -0.68
CACNA1A-232ENST00000636966 SPINK5Q9NQ38 1064 aaPredicted RBP10.79□□□□□ -0.68
CACNA1A-232ENST00000636966 RTL1A6NKG5 1358 aa10.79□□□□□ -0.68
CACNA1A-232ENST00000636966 HSPA1LP34931 641 aa10.78□□□□□ -0.68
CACNA1A-232ENST00000636966 B4GALNT3Q6L9W6 998 aa10.78□□□□□ -0.68
CACNA1A-232ENST00000636966 CCDC136Q96JN2 1154 aa10.78□□□□□ -0.68
CACNA1A-232ENST00000636966 NUDCQ9Y266 331 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms