RNA–Protein interactions for RNA: ENST00000636690.1

GABRB3-221, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-221ENST00000636690 ZNF853P0CG23 659 aa8.97□□□□□ -0.97
GABRB3-221ENST00000636690 COG6Q9Y2V7 657 aa8.97□□□□□ -0.97
GABRB3-221ENST00000636690 PRKAR2BP31323 418 aa8.96□□□□□ -0.98
GABRB3-221ENST00000636690 TXNDC2Q86VQ3 553 aa8.96□□□□□ -0.98
GABRB3-221ENST00000636690 PANK1Q8TE04 598 aa8.96□□□□□ -0.98
GABRB3-221ENST00000636690 FRAT1Q92837 279 aaPredicted RBP8.96□□□□□ -0.98
GABRB3-221ENST00000636690 RTN4Q9NQC3 1192 aaKnown RBP8.96□□□□□ -0.98
GABRB3-221ENST00000636690 SMC4Q9NTJ3 1288 aa8.96□□□□□ -0.98
GABRB3-221ENST00000636690 RGPD1P0DJD0 1748 aa8.96□□□□□ -0.98
GABRB3-221ENST00000636690 ARHGEF10O15013 1369 aa8.96□□□□□ -0.98
GABRB3-221ENST00000636690 EIF5BO60841 1220 aaKnown RBP8.95□□□□□ -0.98
GABRB3-221ENST00000636690 IGHDP01880 384 aa8.95□□□□□ -0.98
GABRB3-221ENST00000636690 TRIM27P14373 513 aa8.95□□□□□ -0.98
GABRB3-221ENST00000636690 EXOSC9Q06265 439 aaKnown RBP8.95□□□□□ -0.98
GABRB3-221ENST00000636690 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.95□□□□□ -0.98
GABRB3-221ENST00000636690 SSH1Q8WYL5 1049 aa8.95□□□□□ -0.98
GABRB3-221ENST00000636690 CFAP44Q96MT7 982 aa8.95□□□□□ -0.98
GABRB3-221ENST00000636690 PRR36Q9H6K5 1346 aa8.95□□□□□ -0.98
GABRB3-221ENST00000636690 ZNF142P52746 1687 aaPredicted RBP8.94□□□□□ -0.98
GABRB3-221ENST00000636690 RLBP1P12271 317 aa8.94□□□□□ -0.98
GABRB3-221ENST00000636690 LTKP29376 864 aa8.94□□□□□ -0.98
GABRB3-221ENST00000636690 NME9Q86XW9 330 aa8.94□□□□□ -0.98
GABRB3-221ENST00000636690 SOS1Q07889 1333 aaPredicted RBP8.94□□□□□ -0.98
GABRB3-221ENST00000636690 KIAA0232Q92628 1395 aa8.94□□□□□ -0.98
GABRB3-221ENST00000636690 SMC5Q8IY18 1101 aa8.93□□□□□ -0.98
GABRB3-221ENST00000636690 UPF2Q9HAU5 1272 aaKnown RBP8.93□□□□□ -0.98
GABRB3-221ENST00000636690 PCDHB15Q9Y5E8 787 aa8.93□□□□□ -0.98
GABRB3-221ENST00000636690 SBNO1A3KN83 1393 aa8.93□□□□□ -0.98
GABRB3-221ENST00000636690 CEP170BQ9Y4F5 1589 aaPredicted RBP8.93□□□□□ -0.98
GABRB3-221ENST00000636690 RTL1A6NKG5 1358 aa8.92□□□□□ -0.98
GABRB3-221ENST00000636690 FLT4P35916 1363 aa8.92□□□□□ -0.98
GABRB3-221ENST00000636690 KDRP35968 1356 aa8.92□□□□□ -0.98
GABRB3-221ENST00000636690 ACEP12821 1306 aa8.92□□□□□ -0.98
GABRB3-221ENST00000636690 PAK3O75914 559 aaPredicted RBP8.92□□□□□ -0.98
GABRB3-221ENST00000636690 RTL5Q5HYW3 569 aaPredicted RBP8.92□□□□□ -0.98
GABRB3-221ENST00000636690 TSR2Q969E8 191 aaKnown RBP8.92□□□□□ -0.98
GABRB3-221ENST00000636690 API5Q9BZZ5 524 aaKnown RBP8.92□□□□□ -0.98
GABRB3-221ENST00000636690 ZBTB40Q9NUA8 1239 aa8.92□□□□□ -0.98
GABRB3-221ENST00000636690 EMILIN1Q9Y6C2 1016 aa8.92□□□□□ -0.98
GABRB3-221ENST00000636690 ABCC4O15439 1325 aa8.91□□□□□ -0.98
GABRB3-221ENST00000636690 HTATSF1O43719 755 aaKnown RBP8.91□□□□□ -0.98
GABRB3-221ENST00000636690 VAMP4O75379 141 aa8.91□□□□□ -0.98
GABRB3-221ENST00000636690 DAXXQ9UER7 740 aaPredicted RBP8.91□□□□□ -0.98
GABRB3-221ENST00000636690 NOB1Q9ULX3 412 aaKnown RBP8.91□□□□□ -0.98
GABRB3-221ENST00000636690 FMN2Q9NZ56 1722 aa8.91□□□□□ -0.98
GABRB3-221ENST00000636690 DLG5Q8TDM6 1919 aa8.9□□□□□ -0.98
GABRB3-221ENST00000636690 RGS3P49796 1198 aa8.9□□□□□ -0.98
GABRB3-221ENST00000636690 BECN1Q14457 450 aa8.9□□□□□ -0.98
GABRB3-221ENST00000636690 ITPRIPQ8IWB1 547 aa8.9□□□□□ -0.98
GABRB3-221ENST00000636690 GCC1Q96CN9 775 aa8.9□□□□□ -0.98
GABRB3-221ENST00000636690 BABAM1Q9NWV8 329 aa8.9□□□□□ -0.98
GABRB3-221ENST00000636690 AMOTL2Q9Y2J4 779 aa8.9□□□□□ -0.98
GABRB3-221ENST00000636690 EIF4A2Q14240 407 aaKnown RBP8.89□□□□□ -0.99
GABRB3-221ENST00000636690 NPM2Q86SE8 214 aaKnown RBP8.89□□□□□ -0.99
GABRB3-221ENST00000636690 MRPL50Q8N5N7 158 aaKnown RBP8.89□□□□□ -0.99
GABRB3-221ENST00000636690 PHACTR3Q96KR7 559 aa8.89□□□□□ -0.99
GABRB3-221ENST00000636690 BCL2L13Q9BXK5 485 aa8.89□□□□□ -0.99
GABRB3-221ENST00000636690 PDZRN3Q9UPQ7 1066 aa8.89□□□□□ -0.99
GABRB3-221ENST00000636690 PEAK1Q9H792 1746 aa8.88□□□□□ -0.99
GABRB3-221ENST00000636690 PTPRCP08575 1304 aa8.88□□□□□ -0.99
GABRB3-221ENST00000636690 IGSF1Q8N6C5 1336 aa8.88□□□□□ -0.99
GABRB3-221ENST00000636690 CHL1O00533 1208 aa8.88□□□□□ -0.99
GABRB3-221ENST00000636690 TWISTNBQ3B726 338 aaPredicted RBP8.88□□□□□ -0.99
GABRB3-221ENST00000636690 TMEM57Q8N5G2 664 aa8.88□□□□□ -0.99
GABRB3-221ENST00000636690 CHMP4AQ9BY43 222 aa8.88□□□□□ -0.99
GABRB3-221ENST00000636690 MBIPQ9NS73 344 aa8.88□□□□□ -0.99
GABRB3-221ENST00000636690 PIK3C2AO00443 1686 aa8.88□□□□□ -0.99
GABRB3-221ENST00000636690 LRRC37A3O60309 1634 aa8.87□□□□□ -0.99
GABRB3-221ENST00000636690 PHRF1Q9P1Y6 1649 aaKnown RBP8.87□□□□□ -0.99
GABRB3-221ENST00000636690 HMOX1P09601 288 aa8.87□□□□□ -0.99
GABRB3-221ENST00000636690 GAS2L2Q8NHY3 880 aa8.87□□□□□ -0.99
GABRB3-221ENST00000636690 TBC1D32Q96NH3 1257 aa8.87□□□□□ -0.99
GABRB3-221ENST00000636690 CHD2O14647 1828 aaKnown RBP8.87□□□□□ -0.99
GABRB3-221ENST00000636690 SETD1BQ9UPS6 1966 aaKnown RBP8.86□□□□□ -0.99
GABRB3-221ENST00000636690 USP19O94966 1318 aa8.86□□□□□ -0.99
GABRB3-221ENST00000636690 LMTK3Q96Q04 1460 aa8.86□□□□□ -0.99
GABRB3-221ENST00000636690 ZBTB7BO15156 539 aaPredicted RBP8.86□□□□□ -0.99
GABRB3-221ENST00000636690 NUCB1Q02818 461 aa8.86□□□□□ -0.99
GABRB3-221ENST00000636690 RRS1Q15050 365 aaKnown RBP8.86□□□□□ -0.99
GABRB3-221ENST00000636690 CRB1P82279 1406 aa8.86□□□□□ -0.99
GABRB3-221ENST00000636690 ADGRL3Q9HAR2 1447 aa8.86□□□□□ -0.99
GABRB3-221ENST00000636690 PLEKHG2Q9H7P9 1386 aa8.86□□□□□ -0.99
GABRB3-221ENST00000636690 MAP3K19Q56UN5 1328 aa8.85□□□□□ -0.99
GABRB3-221ENST00000636690 ADAMTSL3P82987 1691 aa8.85□□□□□ -0.99
GABRB3-221ENST00000636690 BMP2KLQ5H9B9 411 aa8.85□□□□□ -0.99
GABRB3-221ENST00000636690 INTS3Q68E01 1043 aaKnown RBP8.85□□□□□ -0.99
GABRB3-221ENST00000636690 SULT6B1Q6IMI4 303 aa8.85□□□□□ -0.99
GABRB3-221ENST00000636690 SLC26A8Q96RN1 970 aa8.85□□□□□ -0.99
GABRB3-221ENST00000636690 TNNQ9UQP3 1299 aa8.85□□□□□ -0.99
GABRB3-221ENST00000636690 NWD1Q149M9 1564 aa8.85□□□□□ -0.99
GABRB3-221ENST00000636690 MST1RQ04912 1400 aa8.84□□□□□ -0.99
GABRB3-221ENST00000636690 ANKLE2Q86XL3 938 aa8.84□□□□□ -0.99
GABRB3-221ENST00000636690 NGDNQ8NEJ9 315 aaKnown RBP8.84□□□□□ -0.99
GABRB3-221ENST00000636690 ZRANB1Q9UGI0 708 aa8.84□□□□□ -0.99
GABRB3-221ENST00000636690 CACNA1FO60840 1977 aa8.84□□□□□ -0.99
GABRB3-221ENST00000636690 NCKAP5LQ9HCH0 1330 aa8.83□□□□□ -1
GABRB3-221ENST00000636690 MARF1Q9Y4F3 1742 aaKnown RBP8.83□□□□□ -1
GABRB3-221ENST00000636690 CEBPAP49715 358 aaPredicted RBP8.83□□□□□ -1
GABRB3-221ENST00000636690 CHD1LQ86WJ1 897 aa8.83□□□□□ -1
GABRB3-221ENST00000636690 SKAP1Q86WV1 359 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms