RNA–Protein interactions for RNA: ENST00000636667.1

UBE3A-225, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 5,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-225ENST00000636667 KIAA1522Q9P206 1035 aaPredicted RBP2.35□□□□□ -2.03
UBE3A-225ENST00000636667 SLF2Q8IX21 1173 aa2.34□□□□□ -2.03
UBE3A-225ENST00000636667 SCUBE3Q8IX30 993 aa2.34□□□□□ -2.03
UBE3A-225ENST00000636667 FBXO41Q8TF61 875 aa2.34□□□□□ -2.03
UBE3A-225ENST00000636667 PTK7Q13308 1070 aa2.34□□□□□ -2.03
UBE3A-225ENST00000636667 AEBP1Q8IUX7 1158 aa2.34□□□□□ -2.03
UBE3A-225ENST00000636667 SULF1Q8IWU6 871 aa2.34□□□□□ -2.03
UBE3A-225ENST00000636667 KLRG1Q96E93 195 aa2.34□□□□□ -2.03
UBE3A-225ENST00000636667 CCDC85AQ96PX6 553 aaPredicted RBP2.34□□□□□ -2.03
UBE3A-225ENST00000636667 DESI1Q6ICB0 168 aa2.34□□□□□ -2.04
UBE3A-225ENST00000636667 ZBTB7BO15156 539 aaPredicted RBP2.34□□□□□ -2.04
UBE3A-225ENST00000636667 PRR20EP86478 221 aa2.34□□□□□ -2.04
UBE3A-225ENST00000636667 PRR20CP86479 221 aa2.34□□□□□ -2.04
UBE3A-225ENST00000636667 PRR20DP86480 221 aa2.34□□□□□ -2.04
UBE3A-225ENST00000636667 PRR20BP86481 221 aa2.34□□□□□ -2.04
UBE3A-225ENST00000636667 PRR20AP86496 221 aa2.34□□□□□ -2.04
UBE3A-225ENST00000636667 GZF1Q9H116 711 aaPredicted RBP2.34□□□□□ -2.04
UBE3A-225ENST00000636667 LGR5O75473 907 aa2.33□□□□□ -2.04
UBE3A-225ENST00000636667 IGHA2P01877 340 aa2.33□□□□□ -2.04
UBE3A-225ENST00000636667 SH3BP5LQ7L8J4 393 aa2.33□□□□□ -2.04
UBE3A-225ENST00000636667 CDCA7Q9BWT1 371 aaPredicted RBP2.33□□□□□ -2.04
UBE3A-225ENST00000636667 IRX2Q9BZI1 471 aaPredicted RBP2.33□□□□□ -2.04
UBE3A-225ENST00000636667 ZPR1O75312 459 aa2.33□□□□□ -2.04
UBE3A-225ENST00000636667 HINFPQ9BQA5 517 aa2.33□□□□□ -2.04
UBE3A-225ENST00000636667 ATG7O95352 703 aa2.33□□□□□ -2.04
UBE3A-225ENST00000636667 LMOD1P29536 600 aaPredicted RBP2.33□□□□□ -2.04
UBE3A-225ENST00000636667 ATP6V1AP38606 617 aa2.33□□□□□ -2.04
UBE3A-225ENST00000636667 NBPF14Q5TI25 921 aa2.33□□□□□ -2.04
UBE3A-225ENST00000636667 NUTM1Q86Y26 1132 aa2.33□□□□□ -2.04
UBE3A-225ENST00000636667 NKX2-3Q8TAU0 364 aa2.33□□□□□ -2.04
UBE3A-225ENST00000636667 C6orf229H3BNL8 230 aa2.33□□□□□ -2.04
UBE3A-225ENST00000636667 MFAP1P55081 439 aaKnown RBP2.33□□□□□ -2.04
UBE3A-225ENST00000636667 RETREG3Q86VR2 466 aa2.33□□□□□ -2.04
UBE3A-225ENST00000636667 ZNF516Q92618 1163 aa2.33□□□□□ -2.04
UBE3A-225ENST00000636667 UIMC1Q96RL1 719 aa2.33□□□□□ -2.04
UBE3A-225ENST00000636667 PRR14Q9BWN1 585 aa2.33□□□□□ -2.04
UBE3A-225ENST00000636667 SALL2Q9Y467 1007 aaPredicted RBP2.33□□□□□ -2.04
UBE3A-225ENST00000636667 NUTM2BA6NNL0 878 aaPredicted RBP2.32□□□□□ -2.04
UBE3A-225ENST00000636667 NUTM2EB1AL46 878 aaPredicted RBP2.32□□□□□ -2.04
UBE3A-225ENST00000636667 ATP9BO43861 1147 aa2.32□□□□□ -2.04
UBE3A-225ENST00000636667 DXOO77932 396 aaKnown RBP2.32□□□□□ -2.04
UBE3A-225ENST00000636667 SSFA2P28290 1259 aa2.32□□□□□ -2.04
UBE3A-225ENST00000636667 MMP16P51512 607 aa2.32□□□□□ -2.04
UBE3A-225ENST00000636667 NUTM2DQ5VT03 806 aaPredicted RBP2.32□□□□□ -2.04
UBE3A-225ENST00000636667 RNF135Q8IUD6 432 aa2.32□□□□□ -2.04
UBE3A-225ENST00000636667 NUTM2AQ8IVF1 878 aaPredicted RBP2.32□□□□□ -2.04
UBE3A-225ENST00000636667 ESF1Q9H501 851 aaKnown RBP2.32□□□□□ -2.04
UBE3A-225ENST00000636667 GIGYF1O75420 1035 aaPredicted RBP2.32□□□□□ -2.04
UBE3A-225ENST00000636667 SCTRP47872 440 aa2.32□□□□□ -2.04
UBE3A-225ENST00000636667 RNF19AQ9NV58 838 aa2.32□□□□□ -2.04
UBE3A-225ENST00000636667 IVNS1ABPQ9Y6Y0 642 aa2.32□□□□□ -2.04
UBE3A-225ENST00000636667 USP17L3A6NCW0 530 aa2.32□□□□□ -2.04
UBE3A-225ENST00000636667 USP17L4A6NCW7 530 aa2.32□□□□□ -2.04
UBE3A-225ENST00000636667 SERPINB4P48594 390 aa2.32□□□□□ -2.04
UBE3A-225ENST00000636667 USP17L2Q6R6M4 530 aa2.32□□□□□ -2.04
UBE3A-225ENST00000636667 USP17L1Q7RTZ2 530 aa2.32□□□□□ -2.04
UBE3A-225ENST00000636667 GJD3Q8N144 294 aa2.32□□□□□ -2.04
UBE3A-225ENST00000636667 NCOA4Q13772 614 aa2.32□□□□□ -2.04
UBE3A-225ENST00000636667 COL26A1Q96A83 441 aa2.32□□□□□ -2.04
UBE3A-225ENST00000636667 WWC3Q9ULE0 1092 aa2.32□□□□□ -2.04
UBE3A-225ENST00000636667 RPIAP49247 311 aa2.31□□□□□ -2.04
UBE3A-225ENST00000636667 ELOAQ14241 798 aaKnown RBP2.31□□□□□ -2.04
UBE3A-225ENST00000636667 TSC1Q92574 1164 aa2.31□□□□□ -2.04
UBE3A-225ENST00000636667 FKBPLQ9UIM3 349 aa2.31□□□□□ -2.04
UBE3A-225ENST00000636667 TMEM265A0A087WTH1 108 aa2.31□□□□□ -2.04
UBE3A-225ENST00000636667 USP46P62068 366 aa2.31□□□□□ -2.04
UBE3A-225ENST00000636667 MLLT1Q03111 559 aaPredicted RBP2.31□□□□□ -2.04
UBE3A-225ENST00000636667 DOC2BQ14184 412 aa2.31□□□□□ -2.04
UBE3A-225ENST00000636667 NOLC1Q14978 699 aaKnown RBP eCLIP2.31□□□□□ -2.04
UBE3A-225ENST00000636667 CRIPAKQ8N1N5 446 aa2.31□□□□□ -2.04
UBE3A-225ENST00000636667 ANKLE1Q8NAG6 615 aa2.31□□□□□ -2.04
UBE3A-225ENST00000636667 PKD2L1Q9P0L9 805 aa2.31□□□□□ -2.04
UBE3A-225ENST00000636667 CEP126Q9P2H0 1117 aa2.31□□□□□ -2.04
UBE3A-225ENST00000636667 GNEQ9Y223 722 aaKnown RBP2.31□□□□□ -2.04
UBE3A-225ENST00000636667 LAMA5O15230 3695 aa2.31□□□□□ -2.04
UBE3A-225ENST00000636667 MSS51Q4VC12 460 aa2.31□□□□□ -2.04
UBE3A-225ENST00000636667 ZNF295-AS1Q8N0V1 137 aa2.31□□□□□ -2.04
UBE3A-225ENST00000636667 KDF1Q8NAX2 398 aaPredicted RBP2.31□□□□□ -2.04
UBE3A-225ENST00000636667 USB1Q9BQ65 265 aaKnown RBP2.31□□□□□ -2.04
UBE3A-225ENST00000636667 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.31□□□□□ -2.04
UBE3A-225ENST00000636667 RAD21O60216 631 aa2.31□□□□□ -2.04
UBE3A-225ENST00000636667 DIXDC1Q155Q3 683 aa2.31□□□□□ -2.04
UBE3A-225ENST00000636667 EVA1BQ9NVM1 165 aa2.31□□□□□ -2.04
UBE3A-225ENST00000636667 BRD1O95696 1058 aa2.31□□□□□ -2.04
UBE3A-225ENST00000636667 TNIP3Q96KP6 325 aa2.31□□□□□ -2.04
UBE3A-225ENST00000636667 PCDHGA11Q9Y5H2 935 aa2.31□□□□□ -2.04
UBE3A-225ENST00000636667 CCDC97Q96F63 343 aaPredicted RBP2.3□□□□□ -2.04
UBE3A-225ENST00000636667 USP17L5A8MUK1 530 aa2.3□□□□□ -2.04
UBE3A-225ENST00000636667 USP17L15C9J2P7 530 aa2.3□□□□□ -2.04
UBE3A-225ENST00000636667 USP17L10C9JJH3 530 aa2.3□□□□□ -2.04
UBE3A-225ENST00000636667 USP17L13C9JLJ4 530 aa2.3□□□□□ -2.04
UBE3A-225ENST00000636667 USP17L12C9JPN9 530 aa2.3□□□□□ -2.04
UBE3A-225ENST00000636667 USP17L11C9JVI0 530 aa2.3□□□□□ -2.04
UBE3A-225ENST00000636667 USP17L21D6R901 530 aa2.3□□□□□ -2.04
UBE3A-225ENST00000636667 USP17L18D6R9N7 530 aa2.3□□□□□ -2.04
UBE3A-225ENST00000636667 USP17L22D6RA61 530 aa2.3□□□□□ -2.04
UBE3A-225ENST00000636667 USP17L17D6RBQ6 530 aa2.3□□□□□ -2.04
UBE3A-225ENST00000636667 USP17L19D6RCP7 530 aa2.3□□□□□ -2.04
UBE3A-225ENST00000636667 USP17L20D6RJB6 530 aa2.3□□□□□ -2.04
UBE3A-225ENST00000636667 GDF9O60383 454 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms