RNA–Protein interactions for RNA: ENST00000636292.1

CHRNA7-213, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 4,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-213ENST00000636292 TSHZ2Q9NRE2 1034 aa16.63■□□□□ 0.25
CHRNA7-213ENST00000636292 ABCC11Q96J66 1382 aa16.63■□□□□ 0.25
CHRNA7-213ENST00000636292 PUS7Q96PZ0 661 aaKnown RBP16.63■□□□□ 0.25
CHRNA7-213ENST00000636292 MYO5CQ9NQX4 1742 aa16.63■□□□□ 0.25
CHRNA7-213ENST00000636292 AMER1Q5JTC6 1135 aaPredicted RBP16.63■□□□□ 0.25
CHRNA7-213ENST00000636292 KIF3AQ9Y496 699 aa16.63■□□□□ 0.25
CHRNA7-213ENST00000636292 ERCC6L2Q5T890 1561 aa16.62■□□□□ 0.25
CHRNA7-213ENST00000636292 ARHGEF12Q9NZN5 1544 aa16.62■□□□□ 0.25
CHRNA7-213ENST00000636292 ZRANB1Q9UGI0 708 aa16.61■□□□□ 0.25
CHRNA7-213ENST00000636292 EIF2AK4Q9P2K8 1649 aaKnown RBP16.61■□□□□ 0.25
CHRNA7-213ENST00000636292 IPO9Q96P70 1041 aaKnown RBP16.61■□□□□ 0.25
CHRNA7-213ENST00000636292 CNNM1Q9NRU3 951 aa16.61■□□□□ 0.25
CHRNA7-213ENST00000636292 INTS3Q68E01 1043 aaKnown RBP16.61■□□□□ 0.25
CHRNA7-213ENST00000636292 TRIM34Q9BYJ4 488 aa16.61■□□□□ 0.25
CHRNA7-213ENST00000636292 WASHC4Q2M389 1173 aa16.61■□□□□ 0.25
CHRNA7-213ENST00000636292 ARHGEF5Q12774 1597 aa16.6■□□□□ 0.25
CHRNA7-213ENST00000636292 MVPQ14764 893 aaKnown RBP16.6■□□□□ 0.25
CHRNA7-213ENST00000636292 IFNL2Q8IZJ0 200 aa16.6■□□□□ 0.25
CHRNA7-213ENST00000636292 CABLES1Q8TDN4 633 aa16.6■□□□□ 0.25
CHRNA7-213ENST00000636292 CFAP74Q9C0B2 1584 aa16.6■□□□□ 0.25
CHRNA7-213ENST00000636292 RNF20Q5VTR2 975 aa16.59■□□□□ 0.25
CHRNA7-213ENST00000636292 SYNE3Q6ZMZ3 975 aa16.59■□□□□ 0.25
CHRNA7-213ENST00000636292 NPATQ14207 1427 aa16.59■□□□□ 0.25
CHRNA7-213ENST00000636292 ERC1Q8IUD2 1116 aa16.59■□□□□ 0.25
CHRNA7-213ENST00000636292 PPP1R1BQ9UD71 204 aaPredicted RBP16.59■□□□□ 0.25
CHRNA7-213ENST00000636292 TRDNQ13061 729 aa16.58■□□□□ 0.25
CHRNA7-213ENST00000636292 SIL1Q9H173 461 aa16.58■□□□□ 0.24
CHRNA7-213ENST00000636292 TMEM2Q9UHN6 1383 aa16.58■□□□□ 0.24
CHRNA7-213ENST00000636292 CCDC27Q2M243 656 aa16.58■□□□□ 0.24
CHRNA7-213ENST00000636292 GCC1Q96CN9 775 aa16.58■□□□□ 0.24
CHRNA7-213ENST00000636292 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.58■□□□□ 0.24
CHRNA7-213ENST00000636292 BICDL1Q6ZP65 573 aa16.57■□□□□ 0.24
CHRNA7-213ENST00000636292 FSD1Q9BTV5 496 aa16.57■□□□□ 0.24
CHRNA7-213ENST00000636292 ZCCHC11Q5TAX3 1644 aaKnown RBP16.57■□□□□ 0.24
CHRNA7-213ENST00000636292 CHMP4CQ96CF2 233 aa16.57■□□□□ 0.24
CHRNA7-213ENST00000636292 CCDC57Q2TAC2 916 aa16.57■□□□□ 0.24
CHRNA7-213ENST00000636292 SSH1Q8WYL5 1049 aa16.57■□□□□ 0.24
CHRNA7-213ENST00000636292 PDZRN3Q9UPQ7 1066 aa16.57■□□□□ 0.24
CHRNA7-213ENST00000636292 TTC37Q6PGP7 1564 aa16.57■□□□□ 0.24
CHRNA7-213ENST00000636292 ABCC1P33527 1531 aa16.57■□□□□ 0.24
CHRNA7-213ENST00000636292 RAD21O60216 631 aa16.56■□□□□ 0.24
CHRNA7-213ENST00000636292 AKAP17AQ02040 695 aaKnown RBP16.56■□□□□ 0.24
CHRNA7-213ENST00000636292 CFAP65Q6ZU64 1925 aaKnown RBP16.56■□□□□ 0.24
CHRNA7-213ENST00000636292 FANCIQ9NVI1 1328 aa16.56■□□□□ 0.24
CHRNA7-213ENST00000636292 CPLX2Q6PUV4 134 aaKnown RBP16.56■□□□□ 0.24
CHRNA7-213ENST00000636292 FAM184AQ8NB25 1140 aa16.56■□□□□ 0.24
CHRNA7-213ENST00000636292 ASXL1Q8IXJ9 1541 aa16.56■□□□□ 0.24
CHRNA7-213ENST00000636292 LMTK3Q96Q04 1460 aa16.56■□□□□ 0.24
CHRNA7-213ENST00000636292 SRGAP3O43295 1099 aa16.56■□□□□ 0.24
CHRNA7-213ENST00000636292 DNAJC2Q99543 621 aaKnown RBP16.56■□□□□ 0.24
CHRNA7-213ENST00000636292 FOXD4L5Q5VV16 416 aaPredicted RBP16.56■□□□□ 0.24
CHRNA7-213ENST00000636292 CNTROBQ8N137 903 aa16.56■□□□□ 0.24
CHRNA7-213ENST00000636292 FOXD4L4Q8WXT5 416 aaPredicted RBP16.56■□□□□ 0.24
CHRNA7-213ENST00000636292 MPHOSPH8Q99549 860 aa16.56■□□□□ 0.24
CHRNA7-213ENST00000636292 FAM83GA6ND36 823 aa16.55■□□□□ 0.24
CHRNA7-213ENST00000636292 LTKP29376 864 aa16.55■□□□□ 0.24
CHRNA7-213ENST00000636292 POLKQ9UBT6 870 aa16.55■□□□□ 0.24
CHRNA7-213ENST00000636292 HMGB2P26583 209 aaKnown RBP16.55■□□□□ 0.24
CHRNA7-213ENST00000636292 FMNL2Q96PY5 1086 aa16.55■□□□□ 0.24
CHRNA7-213ENST00000636292 SAMD9LQ8IVG5 1584 aa16.55■□□□□ 0.24
CHRNA7-213ENST00000636292 CDC45O75419 566 aa16.55■□□□□ 0.24
CHRNA7-213ENST00000636292 TBC1D2BQ9UPU7 963 aa16.55■□□□□ 0.24
CHRNA7-213ENST00000636292 TRPM2O94759 1503 aa16.55■□□□□ 0.24
CHRNA7-213ENST00000636292 GOLGA6L6A8MZA4 724 aa16.54■□□□□ 0.24
CHRNA7-213ENST00000636292 TMEM57Q8N5G2 664 aa16.54■□□□□ 0.24
CHRNA7-213ENST00000636292 H3BQV1 296 aa16.54■□□□□ 0.24
CHRNA7-213ENST00000636292 GCP02774 474 aa16.54■□□□□ 0.24
CHRNA7-213ENST00000636292 PTMSP20962 102 aa16.54■□□□□ 0.24
CHRNA7-213ENST00000636292 IFFO2Q5TF58 517 aa16.54■□□□□ 0.24
CHRNA7-213ENST00000636292 CARD14Q9BXL6 1004 aa16.54■□□□□ 0.24
CHRNA7-213ENST00000636292 A0A1W2PP64 1363 aa16.53■□□□□ 0.24
CHRNA7-213ENST00000636292 RARSP54136 660 aaKnown RBP16.53■□□□□ 0.24
CHRNA7-213ENST00000636292 MLH3Q9UHC1 1453 aa16.53■□□□□ 0.24
CHRNA7-213ENST00000636292 LARP1Q6PKG0 1096 aaKnown RBP16.53■□□□□ 0.24
CHRNA7-213ENST00000636292 LRRC59Q96AG4 307 aaKnown RBP16.53■□□□□ 0.24
CHRNA7-213ENST00000636292 RASSF8Q8NHQ8 419 aa16.53■□□□□ 0.24
CHRNA7-213ENST00000636292 EIF4A2Q14240 407 aaKnown RBP16.53■□□□□ 0.24
CHRNA7-213ENST00000636292 ALDH1L2Q3SY69 923 aa16.53■□□□□ 0.24
CHRNA7-213ENST00000636292 C8orf37Q96NL8 207 aa16.53■□□□□ 0.24
CHRNA7-213ENST00000636292 CCDC85AQ96PX6 553 aaPredicted RBP16.53■□□□□ 0.24
CHRNA7-213ENST00000636292 ORAI2Q96SN7 254 aa16.53■□□□□ 0.24
CHRNA7-213ENST00000636292 LRRCC1Q9C099 1032 aa16.53■□□□□ 0.24
CHRNA7-213ENST00000636292 TSPOAP1O95153 1857 aa16.52■□□□□ 0.24
CHRNA7-213ENST00000636292 CCDC158Q5M9N0 1113 aa16.52■□□□□ 0.24
CHRNA7-213ENST00000636292 MAGI2Q86UL8 1455 aa16.52■□□□□ 0.24
CHRNA7-213ENST00000636292 SLC4A3P48751 1232 aa16.52■□□□□ 0.23
CHRNA7-213ENST00000636292 AEBP1Q8IUX7 1158 aa16.52■□□□□ 0.23
CHRNA7-213ENST00000636292 CCDC34Q96HJ3 373 aa16.52■□□□□ 0.23
CHRNA7-213ENST00000636292 GZF1Q9H116 711 aaPredicted RBP16.52■□□□□ 0.23
CHRNA7-213ENST00000636292 DBF4Q9UBU7 674 aaPredicted RBP16.52■□□□□ 0.23
CHRNA7-213ENST00000636292 CPLX1O14810 134 aa16.51■□□□□ 0.23
CHRNA7-213ENST00000636292 NRDCO43847 1150 aa16.51■□□□□ 0.23
CHRNA7-213ENST00000636292 ZNF652Q9Y2D9 606 aa16.51■□□□□ 0.23
CHRNA7-213ENST00000636292 CLSTN1O94985 981 aa16.51■□□□□ 0.23
CHRNA7-213ENST00000636292 SF3A1Q15459 793 aaKnown RBP16.51■□□□□ 0.23
CHRNA7-213ENST00000636292 ZCRB1Q8TBF4 217 aaKnown RBP16.51■□□□□ 0.23
CHRNA7-213ENST00000636292 MARCH6O60337 910 aa16.51■□□□□ 0.23
CHRNA7-213ENST00000636292 CSPP1Q1MSJ5 1256 aa16.51■□□□□ 0.23
CHRNA7-213ENST00000636292 FLT4P35916 1363 aa16.51■□□□□ 0.23
CHRNA7-213ENST00000636292 ZPR1O75312 459 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms