RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 PRDM11Q9NQV5 511 aa20.62■□□□□ 0.89
CLN8-209ENST00000635970 SLIT2O94813 1529 aa20.62■□□□□ 0.89
CLN8-209ENST00000635970 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.61■□□□□ 0.89
CLN8-209ENST00000635970 COL18A1P39060 1754 aa20.61■□□□□ 0.89
CLN8-209ENST00000635970 CPDO75976 1380 aa20.6■□□□□ 0.89
CLN8-209ENST00000635970 FBLN1P23142 703 aa20.6■□□□□ 0.89
CLN8-209ENST00000635970 IRX6P78412 446 aaPredicted RBP20.6■□□□□ 0.89
CLN8-209ENST00000635970 KCNH5Q8NCM2 988 aa20.59■□□□□ 0.89
CLN8-209ENST00000635970 KNSTRNQ9Y448 316 aa20.59■□□□□ 0.89
CLN8-209ENST00000635970 BCL9LQ86UU0 1499 aa20.59■□□□□ 0.89
CLN8-209ENST00000635970 PER1O15534 1290 aaPredicted RBP20.59■□□□□ 0.89
CLN8-209ENST00000635970 FNBP4Q8N3X1 1017 aaPredicted RBP20.58■□□□□ 0.89
CLN8-209ENST00000635970 CAMTA1Q9Y6Y1 1673 aa20.58■□□□□ 0.88
CLN8-209ENST00000635970 USP21Q9UK80 565 aa20.57■□□□□ 0.88
CLN8-209ENST00000635970 BTG4Q9NY30 223 aa20.57■□□□□ 0.88
CLN8-209ENST00000635970 SMG6Q86US8 1419 aaKnown RBP20.56■□□□□ 0.88
CLN8-209ENST00000635970 CCDC184Q52MB2 194 aa20.56■□□□□ 0.88
CLN8-209ENST00000635970 AMER1Q5JTC6 1135 aaPredicted RBP20.56■□□□□ 0.88
CLN8-209ENST00000635970 ARHGEF25Q86VW2 580 aa20.56■□□□□ 0.88
CLN8-209ENST00000635970 FAM9BQ8IZU0 186 aa20.56■□□□□ 0.88
CLN8-209ENST00000635970 MAP2P11137 1827 aaKnown RBP20.56■□□□□ 0.88
CLN8-209ENST00000635970 CNGB1Q14028 1251 aaPredicted RBP20.55■□□□□ 0.88
CLN8-209ENST00000635970 PEAK1Q9H792 1746 aa20.55■□□□□ 0.88
CLN8-209ENST00000635970 NSD2O96028 1365 aa20.54■□□□□ 0.88
CLN8-209ENST00000635970 RRS1Q15050 365 aaKnown RBP20.54■□□□□ 0.88
CLN8-209ENST00000635970 POTEAQ6S8J7 498 aa20.54■□□□□ 0.88
CLN8-209ENST00000635970 TNNT2P45379 298 aaPredicted RBP20.53■□□□□ 0.88
CLN8-209ENST00000635970 ZNF772Q68DY9 489 aaPredicted RBP20.53■□□□□ 0.88
CLN8-209ENST00000635970 CC2D1BQ5T0F9 858 aaKnown RBP20.52■□□□□ 0.88
CLN8-209ENST00000635970 UNC5CLQ8IV45 518 aa20.52■□□□□ 0.88
CLN8-209ENST00000635970 AATKQ6ZMQ8 1374 aa20.52■□□□□ 0.88
CLN8-209ENST00000635970 COL5A2P05997 1499 aaPredicted RBP20.52■□□□□ 0.88
CLN8-209ENST00000635970 MAP3K19Q56UN5 1328 aa20.52■□□□□ 0.88
CLN8-209ENST00000635970 AXIN2Q9Y2T1 843 aa20.52■□□□□ 0.87
CLN8-209ENST00000635970 ATRNO75882 1429 aa20.51■□□□□ 0.87
CLN8-209ENST00000635970 ABCC6O95255 1503 aa20.51■□□□□ 0.87
CLN8-209ENST00000635970 RNF123Q5XPI4 1314 aa20.51■□□□□ 0.87
CLN8-209ENST00000635970 STRN4Q9NRL3 753 aa20.5■□□□□ 0.87
CLN8-209ENST00000635970 QTRT2Q9H974 415 aaKnown RBP20.5■□□□□ 0.87
CLN8-209ENST00000635970 GLI3P10071 1580 aa20.5■□□□□ 0.87
CLN8-209ENST00000635970 MORC1Q86VD1 984 aa20.48■□□□□ 0.87
CLN8-209ENST00000635970 TRPC5Q9UL62 973 aaPredicted RBP20.48■□□□□ 0.87
CLN8-209ENST00000635970 EMILIN1Q9Y6C2 1016 aa20.48■□□□□ 0.87
CLN8-209ENST00000635970 B4GALNT3Q6L9W6 998 aa20.46■□□□□ 0.87
CLN8-209ENST00000635970 NUDCQ9Y266 331 aa20.46■□□□□ 0.87
CLN8-209ENST00000635970 NPC1L1Q9UHC9 1359 aa20.46■□□□□ 0.87
CLN8-209ENST00000635970 RGPD2P0DJD1 1756 aa20.46■□□□□ 0.87
CLN8-209ENST00000635970 AMPHP49418 695 aa20.45■□□□□ 0.86
CLN8-209ENST00000635970 HOXC9P31274 260 aa20.45■□□□□ 0.86
CLN8-209ENST00000635970 EVA1CP58658 441 aa20.45■□□□□ 0.86
CLN8-209ENST00000635970 VPS72Q15906 364 aa20.45■□□□□ 0.86
CLN8-209ENST00000635970 LARP1Q6PKG0 1096 aaKnown RBP20.45■□□□□ 0.86
CLN8-209ENST00000635970 CCDC9Q9Y3X0 531 aaKnown RBP20.45■□□□□ 0.86
CLN8-209ENST00000635970 RTL1A6NKG5 1358 aa20.44■□□□□ 0.86
CLN8-209ENST00000635970 PPM1GO15355 546 aaPredicted RBP20.44■□□□□ 0.86
CLN8-209ENST00000635970 BLMP54132 1417 aaPredicted RBP20.44■□□□□ 0.86
CLN8-209ENST00000635970 IP6K1Q92551 441 aa20.43■□□□□ 0.86
CLN8-209ENST00000635970 POLKQ9UBT6 870 aa20.43■□□□□ 0.86
CLN8-209ENST00000635970 GJD4Q96KN9 370 aaPredicted RBP20.43■□□□□ 0.86
CLN8-209ENST00000635970 USP35Q9P2H5 1018 aa20.42■□□□□ 0.86
CLN8-209ENST00000635970 ERBB3P21860 1342 aa20.42■□□□□ 0.86
CLN8-209ENST00000635970 FLT4P35916 1363 aa20.42■□□□□ 0.86
CLN8-209ENST00000635970 FAM208AQ9UK61 1670 aaKnown RBP20.42■□□□□ 0.86
CLN8-209ENST00000635970 WNK3Q9BYP7 1800 aa20.42■□□□□ 0.86
CLN8-209ENST00000635970 CRB1P82279 1406 aa20.41■□□□□ 0.86
CLN8-209ENST00000635970 SPATA31A5Q5VU36 1347 aa20.41■□□□□ 0.86
CLN8-209ENST00000635970 SPATA31A7Q8IWB4 1347 aa20.41■□□□□ 0.86
CLN8-209ENST00000635970 WDR17Q8IZU2 1322 aa20.41■□□□□ 0.86
CLN8-209ENST00000635970 RXRBP28702 533 aa20.41■□□□□ 0.86
CLN8-209ENST00000635970 ANKRD24Q8TF21 1146 aa20.41■□□□□ 0.86
CLN8-209ENST00000635970 LTV1Q96GA3 475 aaPredicted RBP20.41■□□□□ 0.86
CLN8-209ENST00000635970 NOP58Q9Y2X3 529 aaKnown RBP20.41■□□□□ 0.86
CLN8-209ENST00000635970 RBM6P78332 1123 aaKnown RBP20.4■□□□□ 0.86
CLN8-209ENST00000635970 HSP90AB2PQ58FF8 381 aa20.4■□□□□ 0.86
CLN8-209ENST00000635970 SPATA31A1Q5TZJ5 1347 aa20.39■□□□□ 0.86
CLN8-209ENST00000635970 CSB-PGBD3P0DP91 1061 aa20.39■□□□□ 0.86
CLN8-209ENST00000635970 RGS12O14924 1447 aa20.39■□□□□ 0.85
CLN8-209ENST00000635970 KIF24Q5T7B8 1368 aa20.39■□□□□ 0.85
CLN8-209ENST00000635970 ILDR2Q71H61 639 aa20.39■□□□□ 0.85
CLN8-209ENST00000635970 TOM1L2Q6ZVM7 507 aa20.38■□□□□ 0.85
CLN8-209ENST00000635970 INSRP06213 1382 aa20.38■□□□□ 0.85
CLN8-209ENST00000635970 BRWD3Q6RI45 1802 aa20.38■□□□□ 0.85
CLN8-209ENST00000635970 CDK12Q9NYV4 1490 aaPredicted RBP20.37■□□□□ 0.85
CLN8-209ENST00000635970 THSD7AQ9UPZ6 1657 aa20.36■□□□□ 0.85
CLN8-209ENST00000635970 FAM98CQ17RN3 349 aaKnown RBP20.35■□□□□ 0.85
CLN8-209ENST00000635970 PARD3Q8TEW0 1356 aa20.35■□□□□ 0.85
CLN8-209ENST00000635970 CCDC136Q96JN2 1154 aa20.34■□□□□ 0.85
CLN8-209ENST00000635970 NLRP2Q9NX02 1062 aa20.34■□□□□ 0.85
CLN8-209ENST00000635970 MTHFSP49914 203 aa20.34■□□□□ 0.85
CLN8-209ENST00000635970 EP400Q96L91 3159 aa20.33■□□□□ 0.84
CLN8-209ENST00000635970 ANP32AP39687 249 aaKnown RBP20.32■□□□□ 0.84
CLN8-209ENST00000635970 TCP11L2Q8N4U5 519 aa20.32■□□□□ 0.84
CLN8-209ENST00000635970 PNISRQ8TF01 805 aaKnown RBP20.32■□□□□ 0.84
CLN8-209ENST00000635970 PARP4Q9UKK3 1724 aaKnown RBP20.32■□□□□ 0.84
CLN8-209ENST00000635970 LRRC37A3O60309 1634 aa20.32■□□□□ 0.84
CLN8-209ENST00000635970 CARD10Q9BWT7 1032 aa20.32■□□□□ 0.84
CLN8-209ENST00000635970 A0A0G2JS52 829 aa20.31■□□□□ 0.84
CLN8-209ENST00000635970 PPP2R1AP30153 589 aa20.3■□□□□ 0.84
CLN8-209ENST00000635970 USHBP1Q8N6Y0 703 aa20.3■□□□□ 0.84
CLN8-209ENST00000635970 EIF4A2Q14240 407 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms