RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 FLT4P35916 1363 aa16.31■□□□□ 0.2
CACNA1A-219ENST00000635917 KIF24Q5T7B8 1368 aa16.31■□□□□ 0.2
CACNA1A-219ENST00000635917 TRPM3Q9HCF6 1732 aaPredicted RBP16.31■□□□□ 0.2
CACNA1A-219ENST00000635917 NLRP6P59044 892 aa16.31■□□□□ 0.2
CACNA1A-219ENST00000635917 NFE2L2Q16236 605 aa16.31■□□□□ 0.2
CACNA1A-219ENST00000635917 CRBNQ96SW2 442 aa16.31■□□□□ 0.2
CACNA1A-219ENST00000635917 MYH16Q9H6N6 1097 aa16.31■□□□□ 0.2
CACNA1A-219ENST00000635917 FANCIQ9NVI1 1328 aa16.3■□□□□ 0.2
CACNA1A-219ENST00000635917 NCOA3Q9Y6Q9 1424 aa16.3■□□□□ 0.2
CACNA1A-219ENST00000635917 RARSP54136 660 aaKnown RBP16.3■□□□□ 0.2
CACNA1A-219ENST00000635917 CCDC136Q96JN2 1154 aa16.3■□□□□ 0.2
CACNA1A-219ENST00000635917 FOXD4L1Q9NU39 408 aa16.3■□□□□ 0.2
CACNA1A-219ENST00000635917 LTN1O94822 1766 aa16.29■□□□□ 0.2
CACNA1A-219ENST00000635917 XIRP1Q702N8 1843 aaKnown RBP16.29■□□□□ 0.2
CACNA1A-219ENST00000635917 PROSER2Q86WR7 435 aaPredicted RBP16.29■□□□□ 0.2
CACNA1A-219ENST00000635917 PHRF1Q9P1Y6 1649 aaKnown RBP16.29■□□□□ 0.2
CACNA1A-219ENST00000635917 NFAT5O94916 1531 aa16.29■□□□□ 0.2
CACNA1A-219ENST00000635917 KIF1AQ12756 1690 aa16.29■□□□□ 0.2
CACNA1A-219ENST00000635917 MSH5O43196 834 aa16.29■□□□□ 0.2
CACNA1A-219ENST00000635917 ESCO1Q5FWF5 840 aa16.29■□□□□ 0.2
CACNA1A-219ENST00000635917 C1orf167Q5SNV9 1468 aa16.28■□□□□ 0.2
CACNA1A-219ENST00000635917 KDRP35968 1356 aa16.28■□□□□ 0.2
CACNA1A-219ENST00000635917 HSPA2P54652 639 aa16.28■□□□□ 0.2
CACNA1A-219ENST00000635917 AEBP1Q8IUX7 1158 aa16.28■□□□□ 0.2
CACNA1A-219ENST00000635917 ABTB2Q8N961 1025 aa16.28■□□□□ 0.2
CACNA1A-219ENST00000635917 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.28■□□□□ 0.2
CACNA1A-219ENST00000635917 ORAI2Q96SN7 254 aa16.28■□□□□ 0.2
CACNA1A-219ENST00000635917 C19orf44Q9H6X5 657 aa16.28■□□□□ 0.2
CACNA1A-219ENST00000635917 DCCP43146 1447 aa16.28■□□□□ 0.2
CACNA1A-219ENST00000635917 CT47B1P0C2W7 299 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-219ENST00000635917 ARHGEF10O15013 1369 aa16.27■□□□□ 0.19
CACNA1A-219ENST00000635917 TSR2Q969E8 191 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-219ENST00000635917 MST1RQ04912 1400 aa16.26■□□□□ 0.19
CACNA1A-219ENST00000635917 TMEM94Q12767 1356 aa16.25■□□□□ 0.19
CACNA1A-219ENST00000635917 SOX12O15370 315 aa16.25■□□□□ 0.19
CACNA1A-219ENST00000635917 SULT6B1Q6IMI4 303 aa16.25■□□□□ 0.19
CACNA1A-219ENST00000635917 IGSF1Q8N6C5 1336 aa16.25■□□□□ 0.19
CACNA1A-219ENST00000635917 SLIT3O75094 1523 aa16.24■□□□□ 0.19
CACNA1A-219ENST00000635917 NEFMP07197 916 aa16.24■□□□□ 0.19
CACNA1A-219ENST00000635917 ZNF853P0CG23 659 aa16.24■□□□□ 0.19
CACNA1A-219ENST00000635917 HOXC9P31274 260 aa16.24■□□□□ 0.19
CACNA1A-219ENST00000635917 PDE3AQ14432 1141 aa16.24■□□□□ 0.19
CACNA1A-219ENST00000635917 NUTM2GQ5VZR2 741 aa16.24■□□□□ 0.19
CACNA1A-219ENST00000635917 C14orf37Q86TY3 774 aa16.24■□□□□ 0.19
CACNA1A-219ENST00000635917 ALS2Q96Q42 1657 aa16.24■□□□□ 0.19
CACNA1A-219ENST00000635917 RTL1A6NKG5 1358 aa16.23■□□□□ 0.19
CACNA1A-219ENST00000635917 PAK3O75914 559 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-219ENST00000635917 EXOSC9Q06265 439 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-219ENST00000635917 PSME1Q06323 249 aa16.23■□□□□ 0.19
CACNA1A-219ENST00000635917 FOXO3O43524 673 aa16.22■□□□□ 0.19
CACNA1A-219ENST00000635917 AMPHP49418 695 aa16.22■□□□□ 0.19
CACNA1A-219ENST00000635917 EYA1Q99502 592 aa16.22■□□□□ 0.19
CACNA1A-219ENST00000635917 THUMPD2Q9BTF0 503 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-219ENST00000635917 USP19O94966 1318 aa16.19■□□□□ 0.18
CACNA1A-219ENST00000635917 LMOD3Q0VAK6 560 aa16.19■□□□□ 0.18
CACNA1A-219ENST00000635917 IFT57Q9NWB7 429 aa16.19■□□□□ 0.18
CACNA1A-219ENST00000635917 KDM2BQ8NHM5 1336 aa16.19■□□□□ 0.18
CACNA1A-219ENST00000635917 CALD1Q05682 793 aaKnown RBP16.19■□□□□ 0.18
CACNA1A-219ENST00000635917 FAM83GA6ND36 823 aa16.18■□□□□ 0.18
CACNA1A-219ENST00000635917 IP6K1Q92551 441 aa16.18■□□□□ 0.18
CACNA1A-219ENST00000635917 RGPD2P0DJD1 1756 aa16.18■□□□□ 0.18
CACNA1A-219ENST00000635917 KCNH5Q8NCM2 988 aa16.17■□□□□ 0.18
CACNA1A-219ENST00000635917 CFAP44Q96MT7 982 aa16.17■□□□□ 0.18
CACNA1A-219ENST00000635917 RLBP1P12271 317 aa16.17■□□□□ 0.18
CACNA1A-219ENST00000635917 GNAI1P63096 354 aa16.17■□□□□ 0.18
CACNA1A-219ENST00000635917 SSH1Q8WYL5 1049 aa16.17■□□□□ 0.18
CACNA1A-219ENST00000635917 BCL2L13Q9BXK5 485 aa16.17■□□□□ 0.18
CACNA1A-219ENST00000635917 BRPF1P55201 1214 aaPredicted RBP16.16■□□□□ 0.18
CACNA1A-219ENST00000635917 XPCQ01831 940 aaPredicted RBP16.16■□□□□ 0.18
CACNA1A-219ENST00000635917 KRT28Q7Z3Y7 464 aa16.16■□□□□ 0.18
CACNA1A-219ENST00000635917 PANK1Q8TE04 598 aa16.16■□□□□ 0.18
CACNA1A-219ENST00000635917 MBIPQ9NS73 344 aa16.16■□□□□ 0.18
CACNA1A-219ENST00000635917 TNNQ9UQP3 1299 aa16.16■□□□□ 0.18
CACNA1A-219ENST00000635917 LRRC37A3O60309 1634 aa16.15■□□□□ 0.18
CACNA1A-219ENST00000635917 ATF3P18847 181 aa16.15■□□□□ 0.18
CACNA1A-219ENST00000635917 DCTN1Q14203 1278 aa16.15■□□□□ 0.18
CACNA1A-219ENST00000635917 MED1Q15648 1581 aaPredicted RBP16.15■□□□□ 0.18
CACNA1A-219ENST00000635917 ARHGEF25Q86VW2 580 aa16.15■□□□□ 0.18
CACNA1A-219ENST00000635917 CRB1P82279 1406 aa16.15■□□□□ 0.18
CACNA1A-219ENST00000635917 NCAPD2Q15021 1401 aa16.15■□□□□ 0.18
CACNA1A-219ENST00000635917 GCP02774 474 aa16.15■□□□□ 0.18
CACNA1A-219ENST00000635917 MTHFSDQ2M296 383 aaKnown RBP16.15■□□□□ 0.18
CACNA1A-219ENST00000635917 CADPS2Q86UW7 1296 aa16.15■□□□□ 0.18
CACNA1A-219ENST00000635917 ZNF428Q96B54 188 aa16.15■□□□□ 0.18
CACNA1A-219ENST00000635917 CAMTA1Q9Y6Y1 1673 aa16.14■□□□□ 0.17
CACNA1A-219ENST00000635917 VAMP4O75379 141 aa16.14■□□□□ 0.17
CACNA1A-219ENST00000635917 ALDH1L2Q3SY69 923 aa16.14■□□□□ 0.17
CACNA1A-219ENST00000635917 FRAT1Q92837 279 aaPredicted RBP16.14■□□□□ 0.17
CACNA1A-219ENST00000635917 CRYBG1Q9Y4K1 1723 aa16.14■□□□□ 0.17
CACNA1A-219ENST00000635917 RGPD5Q99666 1765 aa16.13■□□□□ 0.17
CACNA1A-219ENST00000635917 TSPYL6Q8N831 410 aa16.12■□□□□ 0.17
CACNA1A-219ENST00000635917 COG6Q9Y2V7 657 aa16.12■□□□□ 0.17
CACNA1A-219ENST00000635917 PXDNQ92626 1479 aa16.12■□□□□ 0.17
CACNA1A-219ENST00000635917 MSH6P52701 1360 aa16.12■□□□□ 0.17
CACNA1A-219ENST00000635917 CHL1O00533 1208 aa16.12■□□□□ 0.17
CACNA1A-219ENST00000635917 SMC4Q9NTJ3 1288 aa16.12■□□□□ 0.17
CACNA1A-219ENST00000635917 ZKSCAN2Q63HK3 967 aa16.11■□□□□ 0.17
CACNA1A-219ENST00000635917 RNF216Q9NWF9 866 aaPredicted RBP16.11■□□□□ 0.17
CACNA1A-219ENST00000635917 RBM19Q9Y4C8 960 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-219ENST00000635917 COL18A1P39060 1754 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms