RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 MAGEB6P1A0A0J9YX57 407 aa12.39□□□□□ -0.43
SMARCA2-239ENST00000635388 CEP126Q9P2H0 1117 aa12.39□□□□□ -0.43
SMARCA2-239ENST00000635388 MAFBQ9Y5Q3 323 aaPredicted RBP12.39□□□□□ -0.43
SMARCA2-239ENST00000635388 MCCD1P59942 119 aaPredicted RBP12.38□□□□□ -0.43
SMARCA2-239ENST00000635388 PHTF2Q8N3S3 785 aa12.38□□□□□ -0.43
SMARCA2-239ENST00000635388 ATP9BO43861 1147 aa12.37□□□□□ -0.43
SMARCA2-239ENST00000635388 RPIAP49247 311 aa12.37□□□□□ -0.43
SMARCA2-239ENST00000635388 NFATC2IPQ8NCF5 419 aa12.37□□□□□ -0.43
SMARCA2-239ENST00000635388 ZNF592Q92610 1267 aa12.37□□□□□ -0.43
SMARCA2-239ENST00000635388 CUX2O14529 1486 aa12.37□□□□□ -0.43
SMARCA2-239ENST00000635388 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.36□□□□□ -0.43
SMARCA2-239ENST00000635388 ZBTB24O43167 697 aaPredicted RBP12.36□□□□□ -0.43
SMARCA2-239ENST00000635388 PPP1R15AO75807 674 aaPredicted RBP12.36□□□□□ -0.43
SMARCA2-239ENST00000635388 TRMT44Q8IYL2 757 aaKnown RBP12.36□□□□□ -0.43
SMARCA2-239ENST00000635388 PBXIP1Q96AQ6 731 aa12.36□□□□□ -0.43
SMARCA2-239ENST00000635388 THOC2Q8NI27 1593 aaKnown RBP12.35□□□□□ -0.43
SMARCA2-239ENST00000635388 RFX1P22670 979 aa12.35□□□□□ -0.43
SMARCA2-239ENST00000635388 LMOD1P29536 600 aaPredicted RBP12.35□□□□□ -0.43
SMARCA2-239ENST00000635388 WNT7BP56706 349 aa12.35□□□□□ -0.43
SMARCA2-239ENST00000635388 AGERQ15109 404 aa12.35□□□□□ -0.43
SMARCA2-239ENST00000635388 LIAT1Q6ZQX7 453 aa12.35□□□□□ -0.43
SMARCA2-239ENST00000635388 CHIC2Q9UKJ5 165 aa12.35□□□□□ -0.43
SMARCA2-239ENST00000635388 DZIP3Q86Y13 1208 aaKnown RBP12.33□□□□□ -0.44
SMARCA2-239ENST00000635388 USP17L5A8MUK1 530 aa12.31□□□□□ -0.44
SMARCA2-239ENST00000635388 PLEKHM2Q8IWE5 1019 aa12.31□□□□□ -0.44
SMARCA2-239ENST00000635388 SLC10A4Q96EP9 437 aa12.31□□□□□ -0.44
SMARCA2-239ENST00000635388 PDS5BQ9NTI5 1447 aa12.3□□□□□ -0.44
SMARCA2-239ENST00000635388 SKIP12755 728 aa12.3□□□□□ -0.44
SMARCA2-239ENST00000635388 SLFNL1Q499Z3 407 aa12.3□□□□□ -0.44
SMARCA2-239ENST00000635388 TRAF7Q6Q0C0 670 aa12.3□□□□□ -0.44
SMARCA2-239ENST00000635388 RNF135Q8IUD6 432 aa12.3□□□□□ -0.44
SMARCA2-239ENST00000635388 PRDM2Q13029 1718 aa12.3□□□□□ -0.44
SMARCA2-239ENST00000635388 CADPSQ9ULU8 1353 aa12.3□□□□□ -0.44
SMARCA2-239ENST00000635388 USP17L3A6NCW0 530 aa12.29□□□□□ -0.44
SMARCA2-239ENST00000635388 USP17L4A6NCW7 530 aa12.29□□□□□ -0.44
SMARCA2-239ENST00000635388 ESPNB1AK53 854 aa12.29□□□□□ -0.44
SMARCA2-239ENST00000635388 GIGYF1O75420 1035 aaPredicted RBP12.29□□□□□ -0.44
SMARCA2-239ENST00000635388 VARSP26640 1264 aaKnown RBP12.29□□□□□ -0.44
SMARCA2-239ENST00000635388 USP17L2Q6R6M4 530 aa12.29□□□□□ -0.44
SMARCA2-239ENST00000635388 USP17L1Q7RTZ2 530 aa12.29□□□□□ -0.44
SMARCA2-239ENST00000635388 RETREG2Q8NC44 543 aa12.29□□□□□ -0.44
SMARCA2-239ENST00000635388 KANK4Q5T7N3 995 aaPredicted RBP12.28□□□□□ -0.44
SMARCA2-239ENST00000635388 PLPP7Q8NBV4 271 aa12.28□□□□□ -0.44
SMARCA2-239ENST00000635388 CCDC85AQ96PX6 553 aaPredicted RBP12.28□□□□□ -0.44
SMARCA2-239ENST00000635388 A0A0G2JS52 829 aa12.27□□□□□ -0.45
SMARCA2-239ENST00000635388 TSGA10IPQ3SY00 556 aa12.27□□□□□ -0.45
SMARCA2-239ENST00000635388 NBPF20Q3BBV1 942 aa12.26□□□□□ -0.45
SMARCA2-239ENST00000635388 DEPDC4Q8N2C3 294 aa12.26□□□□□ -0.45
SMARCA2-239ENST00000635388 PLA2G2EQ9NZK7 142 aa12.26□□□□□ -0.45
SMARCA2-239ENST00000635388 CDV3Q9UKY7 258 aaKnown RBP12.26□□□□□ -0.45
SMARCA2-239ENST00000635388 MAP4K5Q9Y4K4 846 aa12.26□□□□□ -0.45
SMARCA2-239ENST00000635388 RC3H1Q5TC82 1133 aaKnown RBP12.25□□□□□ -0.45
SMARCA2-239ENST00000635388 CD2BP2O95400 341 aaKnown RBP12.24□□□□□ -0.45
SMARCA2-239ENST00000635388 NCOA4Q13772 614 aa12.24□□□□□ -0.45
SMARCA2-239ENST00000635388 MAP7D1Q3KQU3 841 aa12.24□□□□□ -0.45
SMARCA2-239ENST00000635388 CFTRP13569 1480 aa12.23□□□□□ -0.45
SMARCA2-239ENST00000635388 ATG7O95352 703 aa12.23□□□□□ -0.45
SMARCA2-239ENST00000635388 SLC19A1P41440 591 aa12.23□□□□□ -0.45
SMARCA2-239ENST00000635388 CDCA8Q53HL2 280 aa12.23□□□□□ -0.45
SMARCA2-239ENST00000635388 EHBP1Q8NDI1 1231 aa12.23□□□□□ -0.45
SMARCA2-239ENST00000635388 MRC2Q9UBG0 1479 aa12.22□□□□□ -0.45
SMARCA2-239ENST00000635388 CEP164Q9UPV0 1460 aa12.22□□□□□ -0.45
SMARCA2-239ENST00000635388 SIAH2O43255 324 aa12.22□□□□□ -0.45
SMARCA2-239ENST00000635388 SEPT12Q8IYM1 358 aa12.22□□□□□ -0.45
SMARCA2-239ENST00000635388 CDK15Q96Q40 435 aa12.22□□□□□ -0.45
SMARCA2-239ENST00000635388 KCTD15Q96SI1 283 aaPredicted RBP12.22□□□□□ -0.45
SMARCA2-239ENST00000635388 LZTS3O60299 673 aaPredicted RBP12.21□□□□□ -0.45
SMARCA2-239ENST00000635388 INTS6LQ5JSJ4 861 aaKnown RBP12.21□□□□□ -0.45
SMARCA2-239ENST00000635388 SPRYD7Q5W111 196 aa12.21□□□□□ -0.45
SMARCA2-239ENST00000635388 VRTNQ9H8Y1 702 aa12.21□□□□□ -0.45
SMARCA2-239ENST00000635388 TLL2Q9Y6L7 1015 aa12.21□□□□□ -0.45
SMARCA2-239ENST00000635388 FANCD2Q9BXW9 1451 aa12.21□□□□□ -0.46
SMARCA2-239ENST00000635388 WNT7AO00755 349 aa12.2□□□□□ -0.46
SMARCA2-239ENST00000635388 RNF20Q5VTR2 975 aa12.2□□□□□ -0.46
SMARCA2-239ENST00000635388 MPNDQ8N594 471 aa12.2□□□□□ -0.46
SMARCA2-239ENST00000635388 DOLKQ9UPQ8 538 aa12.2□□□□□ -0.46
SMARCA2-239ENST00000635388 WDR62O43379 1518 aa12.2□□□□□ -0.46
SMARCA2-239ENST00000635388 TRAIPQ9BWF2 469 aa12.19□□□□□ -0.46
SMARCA2-239ENST00000635388 CDCA7Q9BWT1 371 aaPredicted RBP12.19□□□□□ -0.46
SMARCA2-239ENST00000635388 MKRN1Q9UHC7 482 aaKnown RBP12.19□□□□□ -0.46
SMARCA2-239ENST00000635388 CCDC88BA6NC98 1476 aa12.19□□□□□ -0.46
SMARCA2-239ENST00000635388 ACIN1Q9UKV3 1341 aaKnown RBP12.18□□□□□ -0.46
SMARCA2-239ENST00000635388 VASH1Q7L8A9 365 aaPredicted RBP12.18□□□□□ -0.46
SMARCA2-239ENST00000635388 ZMIZ1Q9ULJ6 1067 aa12.18□□□□□ -0.46
SMARCA2-239ENST00000635388 GRM5P41594 1212 aa12.17□□□□□ -0.46
SMARCA2-239ENST00000635388 ELOAQ14241 798 aaKnown RBP12.17□□□□□ -0.46
SMARCA2-239ENST00000635388 EML3Q32P44 896 aa12.17□□□□□ -0.46
SMARCA2-239ENST00000635388 CRTC2Q53ET0 693 aaPredicted RBP12.17□□□□□ -0.46
SMARCA2-239ENST00000635388 MRGPRX2Q96LB1 330 aa12.17□□□□□ -0.46
SMARCA2-239ENST00000635388 FAM196BA6NMK8 535 aa12.16□□□□□ -0.46
SMARCA2-239ENST00000635388 USTQ9Y2C2 406 aa12.16□□□□□ -0.46
SMARCA2-239ENST00000635388 USP17L15C9J2P7 530 aa12.15□□□□□ -0.46
SMARCA2-239ENST00000635388 USP17L10C9JJH3 530 aa12.15□□□□□ -0.46
SMARCA2-239ENST00000635388 USP17L13C9JLJ4 530 aa12.15□□□□□ -0.46
SMARCA2-239ENST00000635388 USP17L12C9JPN9 530 aa12.15□□□□□ -0.46
SMARCA2-239ENST00000635388 USP17L11C9JVI0 530 aa12.15□□□□□ -0.46
SMARCA2-239ENST00000635388 USP17L21D6R901 530 aa12.15□□□□□ -0.46
SMARCA2-239ENST00000635388 USP17L18D6R9N7 530 aa12.15□□□□□ -0.46
SMARCA2-239ENST00000635388 USP17L22D6RA61 530 aa12.15□□□□□ -0.46
SMARCA2-239ENST00000635388 USP17L17D6RBQ6 530 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms