RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 SMPD1P17405 629 aa12.95□□□□□ -0.34
LINC01108-202ENST00000635227 ADH1CP00326 375 aa12.94□□□□□ -0.34
LINC01108-202ENST00000635227 KCTD15Q96SI1 283 aaPredicted RBP12.94□□□□□ -0.34
LINC01108-202ENST00000635227 UNC13AQ9UPW8 1703 aa12.93□□□□□ -0.34
LINC01108-202ENST00000635227 ADAMTS19Q8TE59 1207 aa12.93□□□□□ -0.34
LINC01108-202ENST00000635227 IRX2Q9BZI1 471 aaPredicted RBP12.93□□□□□ -0.34
LINC01108-202ENST00000635227 CDV3Q9UKY7 258 aaKnown RBP12.93□□□□□ -0.34
LINC01108-202ENST00000635227 NRG2O14511 850 aaPredicted RBP12.92□□□□□ -0.34
LINC01108-202ENST00000635227 FSHRP23945 695 aa12.92□□□□□ -0.34
LINC01108-202ENST00000635227 NBPF20Q3BBV1 942 aa12.92□□□□□ -0.34
LINC01108-202ENST00000635227 ALG2Q9H553 416 aa12.92□□□□□ -0.34
LINC01108-202ENST00000635227 WASF2Q9Y6W5 498 aa12.92□□□□□ -0.34
LINC01108-202ENST00000635227 GIGYF1O75420 1035 aaPredicted RBP12.91□□□□□ -0.34
LINC01108-202ENST00000635227 SEMA3FQ13275 785 aa12.91□□□□□ -0.34
LINC01108-202ENST00000635227 ZNF777Q9ULD5 760 aaPredicted RBP12.91□□□□□ -0.34
LINC01108-202ENST00000635227 FAM187AA6NFU0 413 aa12.9□□□□□ -0.34
LINC01108-202ENST00000635227 NR3C2P08235 984 aa12.9□□□□□ -0.34
LINC01108-202ENST00000635227 SOX11P35716 441 aa12.9□□□□□ -0.34
LINC01108-202ENST00000635227 MCCD1P59942 119 aaPredicted RBP12.9□□□□□ -0.34
LINC01108-202ENST00000635227 ERICH6Q7L0X2 663 aa12.9□□□□□ -0.34
LINC01108-202ENST00000635227 CEP126Q9P2H0 1117 aa12.9□□□□□ -0.34
LINC01108-202ENST00000635227 NNTQ13423 1086 aa12.89□□□□□ -0.35
LINC01108-202ENST00000635227 HDGFL1Q5TGJ6 251 aa12.89□□□□□ -0.35
LINC01108-202ENST00000635227 ESPNB1AK53 854 aa12.88□□□□□ -0.35
LINC01108-202ENST00000635227 RAB15P59190 212 aa12.88□□□□□ -0.35
LINC01108-202ENST00000635227 NR5A1Q13285 461 aa12.88□□□□□ -0.35
LINC01108-202ENST00000635227 INTS6LQ5JSJ4 861 aaKnown RBP12.88□□□□□ -0.35
LINC01108-202ENST00000635227 ZNF592Q92610 1267 aa12.88□□□□□ -0.35
LINC01108-202ENST00000635227 HPS1Q92902 700 aa12.88□□□□□ -0.35
LINC01108-202ENST00000635227 LAPTM4AQ15012 233 aa12.87□□□□□ -0.35
LINC01108-202ENST00000635227 GLMNQ92990 594 aa12.87□□□□□ -0.35
LINC01108-202ENST00000635227 BICRAQ9NZM4 1560 aa12.86□□□□□ -0.35
LINC01108-202ENST00000635227 PKDCCQ504Y2 493 aa12.84□□□□□ -0.35
LINC01108-202ENST00000635227 CCDC116Q8IYX3 515 aa12.84□□□□□ -0.35
LINC01108-202ENST00000635227 PHTF2Q8N3S3 785 aa12.83□□□□□ -0.36
LINC01108-202ENST00000635227 ARID3CA6NKF2 412 aa12.82□□□□□ -0.36
LINC01108-202ENST00000635227 ERVH48-1M5A8F1 160 aa12.82□□□□□ -0.36
LINC01108-202ENST00000635227 PIK3CDO00329 1044 aa12.82□□□□□ -0.36
LINC01108-202ENST00000635227 DGAT1O75907 488 aa12.82□□□□□ -0.36
LINC01108-202ENST00000635227 SEPT12Q8IYM1 358 aa12.82□□□□□ -0.36
LINC01108-202ENST00000635227 CALR3Q96L12 384 aaKnown RBP12.82□□□□□ -0.36
LINC01108-202ENST00000635227 KLF16Q9BXK1 252 aaPredicted RBP12.82□□□□□ -0.36
LINC01108-202ENST00000635227 PPP1R26Q5T8A7 1209 aaPredicted RBP12.81□□□□□ -0.36
LINC01108-202ENST00000635227 TMPRSS4Q9NRS4 437 aa12.81□□□□□ -0.36
LINC01108-202ENST00000635227 AVPP01185 164 aa12.8□□□□□ -0.36
LINC01108-202ENST00000635227 TSGA10IPQ3SY00 556 aa12.8□□□□□ -0.36
LINC01108-202ENST00000635227 SLFNL1Q499Z3 407 aa12.8□□□□□ -0.36
LINC01108-202ENST00000635227 RNF20Q5VTR2 975 aa12.8□□□□□ -0.36
LINC01108-202ENST00000635227 CCDC85AQ96PX6 553 aaPredicted RBP12.8□□□□□ -0.36
LINC01108-202ENST00000635227 UCN2Q96RP3 112 aa12.8□□□□□ -0.36
LINC01108-202ENST00000635227 WDR4P57081 412 aaKnown RBP12.79□□□□□ -0.36
LINC01108-202ENST00000635227 RNF135Q8IUD6 432 aa12.79□□□□□ -0.36
LINC01108-202ENST00000635227 ITPKCQ96DU7 683 aa12.79□□□□□ -0.36
LINC01108-202ENST00000635227 TIMP2P16035 220 aa12.78□□□□□ -0.36
LINC01108-202ENST00000635227 DHX9Q08211 1270 aaKnown RBP12.78□□□□□ -0.36
LINC01108-202ENST00000635227 ZFAND3Q9H8U3 227 aa12.78□□□□□ -0.36
LINC01108-202ENST00000635227 EMILIN1Q9Y6C2 1016 aa12.78□□□□□ -0.36
LINC01108-202ENST00000635227 ZIC2O95409 532 aaPredicted RBP12.77□□□□□ -0.37
LINC01108-202ENST00000635227 ZNF784Q8NCA9 323 aaPredicted RBP12.76□□□□□ -0.37
LINC01108-202ENST00000635227 CDCA7Q9BWT1 371 aaPredicted RBP12.76□□□□□ -0.37
LINC01108-202ENST00000635227 C1orf115Q9H7X2 142 aa12.76□□□□□ -0.37
LINC01108-202ENST00000635227 CHIC2Q9UKJ5 165 aa12.76□□□□□ -0.37
LINC01108-202ENST00000635227 PCDHB11Q9Y5F2 797 aa12.76□□□□□ -0.37
LINC01108-202ENST00000635227 MYT1Q01538 1121 aa12.75□□□□□ -0.37
LINC01108-202ENST00000635227 Q6ZNB5 142 aa12.75□□□□□ -0.37
LINC01108-202ENST00000635227 SUPT5HO00267 1087 aaKnown RBP12.74□□□□□ -0.37
LINC01108-202ENST00000635227 TBC1D9Q6ZT07 1266 aa12.74□□□□□ -0.37
LINC01108-202ENST00000635227 PGPEP1Q9NXJ5 209 aa12.74□□□□□ -0.37
LINC01108-202ENST00000635227 CAPN5O15484 640 aaPredicted RBP12.73□□□□□ -0.37
LINC01108-202ENST00000635227 SKIP12755 728 aa12.73□□□□□ -0.37
LINC01108-202ENST00000635227 PLPP7Q8NBV4 271 aa12.73□□□□□ -0.37
LINC01108-202ENST00000635227 CYLDQ9NQC7 956 aa12.73□□□□□ -0.37
LINC01108-202ENST00000635227 LCE2BO14633 110 aa12.72□□□□□ -0.37
LINC01108-202ENST00000635227 ST8SIA5O15466 376 aa12.72□□□□□ -0.37
LINC01108-202ENST00000635227 LILRA1O75019 489 aa12.72□□□□□ -0.37
LINC01108-202ENST00000635227 SCTRP47872 440 aa12.72□□□□□ -0.37
LINC01108-202ENST00000635227 TRAF7Q6Q0C0 670 aa12.72□□□□□ -0.37
LINC01108-202ENST00000635227 CCDC125Q86Z20 511 aa12.72□□□□□ -0.37
LINC01108-202ENST00000635227 DOLKQ9UPQ8 538 aa12.72□□□□□ -0.37
LINC01108-202ENST00000635227 CBLBQ13191 982 aa12.71□□□□□ -0.37
LINC01108-202ENST00000635227 CTC1Q2NKJ3 1217 aa12.71□□□□□ -0.37
LINC01108-202ENST00000635227 CRIPAKQ8N1N5 446 aa12.71□□□□□ -0.37
LINC01108-202ENST00000635227 NFATC2IPQ8NCF5 419 aa12.71□□□□□ -0.37
LINC01108-202ENST00000635227 NACADO15069 1562 aa12.71□□□□□ -0.37
LINC01108-202ENST00000635227 AXIN1O15169 862 aa12.7□□□□□ -0.38
LINC01108-202ENST00000635227 SMCPP49901 116 aaPredicted RBP12.7□□□□□ -0.38
LINC01108-202ENST00000635227 AAASQ9NRG9 546 aa12.7□□□□□ -0.38
LINC01108-202ENST00000635227 TFIP11Q9UBB9 837 aaKnown RBP12.7□□□□□ -0.38
LINC01108-202ENST00000635227 ADD1P35611 737 aaKnown RBP12.69□□□□□ -0.38
LINC01108-202ENST00000635227 ERVK-9P63128 1117 aa12.69□□□□□ -0.38
LINC01108-202ENST00000635227 MAP7D1Q3KQU3 841 aa12.69□□□□□ -0.38
LINC01108-202ENST00000635227 OXLD1Q5BKU9 147 aa12.69□□□□□ -0.38
LINC01108-202ENST00000635227 DEPDC4Q8N2C3 294 aa12.69□□□□□ -0.38
LINC01108-202ENST00000635227 PPP1R12CQ9BZL4 782 aa12.69□□□□□ -0.38
LINC01108-202ENST00000635227 PALM3A6NDB9 673 aaPredicted RBP12.68□□□□□ -0.38
LINC01108-202ENST00000635227 USP17L5A8MUK1 530 aa12.68□□□□□ -0.38
LINC01108-202ENST00000635227 ATP9BO43861 1147 aa12.68□□□□□ -0.38
LINC01108-202ENST00000635227 CC2D2BQ6DHV5 1058 aa12.67□□□□□ -0.38
LINC01108-202ENST00000635227 Q6ZVU0 165 aa12.67□□□□□ -0.38
LINC01108-202ENST00000635227 DACH1Q9UI36 760 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 295.6 ms