RNA–Protein interactions for RNA: ENST00000634760.1

SMARCA2-227, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 5,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-227ENST00000634760 CAMSAP2Q08AD1 1489 aa25.07■■□□□ 1.6
SMARCA2-227ENST00000634760 WDR97A6NE52 1622 aa25.07■■□□□ 1.6
SMARCA2-227ENST00000634760 NAIPQ13075 1403 aa25.07■■□□□ 1.6
SMARCA2-227ENST00000634760 CIZ1Q9ULV3 898 aaPredicted RBP25.06■■□□□ 1.6
SMARCA2-227ENST00000634760 NAP1L1P55209 391 aaKnown RBP25.06■■□□□ 1.6
SMARCA2-227ENST00000634760 ZSCAN31Q96LW9 406 aaPredicted RBP25.06■■□□□ 1.6
SMARCA2-227ENST00000634760 CABP4P57796 275 aa25.06■■□□□ 1.6
SMARCA2-227ENST00000634760 CHD1LQ86WJ1 897 aa25.06■■□□□ 1.6
SMARCA2-227ENST00000634760 AKNAQ7Z591 1439 aa25.06■■□□□ 1.6
SMARCA2-227ENST00000634760 MAGI1Q96QZ7 1491 aaPredicted RBP25.06■■□□□ 1.6
SMARCA2-227ENST00000634760 FYB1O15117 783 aa25.05■■□□□ 1.6
SMARCA2-227ENST00000634760 NACAP1Q9BZK3 213 aa25.05■■□□□ 1.6
SMARCA2-227ENST00000634760 RPAP2Q8IXW5 612 aaPredicted RBP25.05■■□□□ 1.6
SMARCA2-227ENST00000634760 TSR2Q969E8 191 aaKnown RBP25.05■■□□□ 1.6
SMARCA2-227ENST00000634760 BACH2Q9BYV9 841 aa25.05■■□□□ 1.6
SMARCA2-227ENST00000634760 MAGEC2Q9UBF1 373 aaPredicted RBP25.05■■□□□ 1.6
SMARCA2-227ENST00000634760 ABCC11Q96J66 1382 aa25.04■■□□□ 1.6
SMARCA2-227ENST00000634760 BCAR3O75815 825 aa25.04■■□□□ 1.6
SMARCA2-227ENST00000634760 HSP90B2PQ58FF3 399 aa25.04■■□□□ 1.6
SMARCA2-227ENST00000634760 CAVIN1Q6NZI2 390 aaKnown RBP25.04■■□□□ 1.6
SMARCA2-227ENST00000634760 CNNM1Q9NRU3 951 aa25.04■■□□□ 1.6
SMARCA2-227ENST00000634760 CDK13Q14004 1512 aaKnown RBP25.03■■□□□ 1.6
SMARCA2-227ENST00000634760 NSD3Q9BZ95 1437 aa25.03■■□□□ 1.6
SMARCA2-227ENST00000634760 TRIM5Q9C035 493 aa25.03■■□□□ 1.6
SMARCA2-227ENST00000634760 HMGB2P26583 209 aaKnown RBP25.03■■□□□ 1.6
SMARCA2-227ENST00000634760 CT47A1Q5JQC4 288 aaPredicted RBP25.03■■□□□ 1.6
SMARCA2-227ENST00000634760 RDXP35241 583 aaKnown RBP25.02■■□□□ 1.6
SMARCA2-227ENST00000634760 STK38Q15208 465 aa25.02■■□□□ 1.6
SMARCA2-227ENST00000634760 PDILTQ8N807 584 aa25.02■■□□□ 1.6
SMARCA2-227ENST00000634760 FAM135AQ9P2D6 1515 aa25.02■■□□□ 1.6
SMARCA2-227ENST00000634760 FAM13BQ9NYF5 915 aa25.02■■□□□ 1.6
SMARCA2-227ENST00000634760 NFE2L2Q16236 605 aa25.02■■□□□ 1.6
SMARCA2-227ENST00000634760 ZNF530Q6P9A1 599 aaPredicted RBP25.02■■□□□ 1.6
SMARCA2-227ENST00000634760 C1orf115Q9H7X2 142 aa25.02■■□□□ 1.6
SMARCA2-227ENST00000634760 PRPF40AO75400 957 aaKnown RBP25.02■■□□□ 1.6
SMARCA2-227ENST00000634760 CDK5RAP3Q96JB5 506 aa25.02■■□□□ 1.6
SMARCA2-227ENST00000634760 NOM1Q5C9Z4 860 aaKnown RBP25.01■■□□□ 1.59
SMARCA2-227ENST00000634760 OFD1O75665 1012 aa25■■□□□ 1.59
SMARCA2-227ENST00000634760 KRT32Q14532 448 aa25■■□□□ 1.59
SMARCA2-227ENST00000634760 CDKL5O76039 1030 aa25■■□□□ 1.59
SMARCA2-227ENST00000634760 CCDC192P0DO97 292 aa25■■□□□ 1.59
SMARCA2-227ENST00000634760 TXLNBQ8N3L3 684 aa25■■□□□ 1.59
SMARCA2-227ENST00000634760 RBM42Q9BTD8 480 aaKnown RBP25■■□□□ 1.59
SMARCA2-227ENST00000634760 SLFN5Q08AF3 891 aa25■■□□□ 1.59
SMARCA2-227ENST00000634760 TRIM22Q8IYM9 498 aa25■■□□□ 1.59
SMARCA2-227ENST00000634760 HMGN5P82970 282 aaKnown RBP24.99■■□□□ 1.59
SMARCA2-227ENST00000634760 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.99■■□□□ 1.59
SMARCA2-227ENST00000634760 ODF2Q5BJF6 829 aa24.99■■□□□ 1.59
SMARCA2-227ENST00000634760 CTNNA3Q9UI47 895 aa24.99■■□□□ 1.59
SMARCA2-227ENST00000634760 SMC2O95347 1197 aa24.98■■□□□ 1.59
SMARCA2-227ENST00000634760 CAGE1Q8TC20 777 aa24.98■■□□□ 1.59
SMARCA2-227ENST00000634760 ANKLE2Q86XL3 938 aa24.97■■□□□ 1.59
SMARCA2-227ENST00000634760 ALDH1L2Q3SY69 923 aa24.97■■□□□ 1.59
SMARCA2-227ENST00000634760 KRT85P78386 507 aa24.96■■□□□ 1.59
SMARCA2-227ENST00000634760 R3HCC1Q9Y3T6 440 aaKnown RBP24.96■■□□□ 1.59
SMARCA2-227ENST00000634760 KCNH5Q8NCM2 988 aa24.96■■□□□ 1.59
SMARCA2-227ENST00000634760 CCDC69A6NI79 296 aa24.96■■□□□ 1.59
SMARCA2-227ENST00000634760 AEBP2Q6ZN18 517 aaPredicted RBP24.96■■□□□ 1.59
SMARCA2-227ENST00000634760 CBFA2T2O43439 604 aa24.95■■□□□ 1.58
SMARCA2-227ENST00000634760 RAB11FIP3O75154 756 aa24.95■■□□□ 1.58
SMARCA2-227ENST00000634760 NOL7Q9UMY1 257 aaKnown RBP24.94■■□□□ 1.58
SMARCA2-227ENST00000634760 CCAR1Q8IX12 1150 aaKnown RBP24.94■■□□□ 1.58
SMARCA2-227ENST00000634760 CCDC57Q2TAC2 916 aa24.94■■□□□ 1.58
SMARCA2-227ENST00000634760 BTBD11A6QL63 1104 aa24.93■■□□□ 1.58
SMARCA2-227ENST00000634760 STIM1Q13586 685 aa24.93■■□□□ 1.58
SMARCA2-227ENST00000634760 NSD2O96028 1365 aa24.93■■□□□ 1.58
SMARCA2-227ENST00000634760 GNAT3A8MTJ3 354 aa24.93■■□□□ 1.58
SMARCA2-227ENST00000634760 PPP6R1Q9UPN7 881 aa24.92■■□□□ 1.58
SMARCA2-227ENST00000634760 IKQ13123 557 aaPredicted RBP24.92■■□□□ 1.58
SMARCA2-227ENST00000634760 WASF1Q92558 559 aa24.92■■□□□ 1.58
SMARCA2-227ENST00000634760 PDRG1Q9NUG6 133 aa24.92■■□□□ 1.58
SMARCA2-227ENST00000634760 CWC15Q9P013 229 aaKnown RBP24.92■■□□□ 1.58
SMARCA2-227ENST00000634760 ARHGEF11O15085 1522 aa24.92■■□□□ 1.58
SMARCA2-227ENST00000634760 TMPOP42166 694 aaKnown RBP24.92■■□□□ 1.58
SMARCA2-227ENST00000634760 RNF214Q8ND24 703 aa24.92■■□□□ 1.58
SMARCA2-227ENST00000634760 TNMDQ9H2S6 317 aa24.92■■□□□ 1.58
SMARCA2-227ENST00000634760 LUC7LQ9NQ29 371 aaKnown RBP24.91■■□□□ 1.58
SMARCA2-227ENST00000634760 FIBPO43427 364 aa24.91■■□□□ 1.58
SMARCA2-227ENST00000634760 CFAP45Q9UL16 551 aa24.91■■□□□ 1.58
SMARCA2-227ENST00000634760 DCTN1Q14203 1278 aa24.91■■□□□ 1.58
SMARCA2-227ENST00000634760 AACSQ86V21 672 aa24.91■■□□□ 1.58
SMARCA2-227ENST00000634760 ZNHIT6Q9NWK9 470 aaKnown RBP24.91■■□□□ 1.58
SMARCA2-227ENST00000634760 NKTRP30414 1462 aaKnown RBP24.91■■□□□ 1.58
SMARCA2-227ENST00000634760 TOM1L2Q6ZVM7 507 aa24.9■■□□□ 1.58
SMARCA2-227ENST00000634760 ABCC5O15440 1437 aa24.9■■□□□ 1.58
SMARCA2-227ENST00000634760 BLOC1S2Q6QNY1 142 aa24.9■■□□□ 1.58
SMARCA2-227ENST00000634760 HSP90AB2PQ58FF8 381 aa24.9■■□□□ 1.58
SMARCA2-227ENST00000634760 RRP12Q5JTH9 1297 aaKnown RBP24.89■■□□□ 1.58
SMARCA2-227ENST00000634760 PLEKHH1Q9ULM0 1364 aa24.89■■□□□ 1.57
SMARCA2-227ENST00000634760 NUDT16Q96DE0 195 aaKnown RBP24.88■■□□□ 1.57
SMARCA2-227ENST00000634760 SRGAP3O43295 1099 aa24.87■■□□□ 1.57
SMARCA2-227ENST00000634760 LARP1BQ659C4 914 aaKnown RBP24.87■■□□□ 1.57
SMARCA2-227ENST00000634760 STRN4Q9NRL3 753 aa24.87■■□□□ 1.57
SMARCA2-227ENST00000634760 NCOA1Q15788 1441 aa24.87■■□□□ 1.57
SMARCA2-227ENST00000634760 CCDC61Q9Y6R9 512 aa24.87■■□□□ 1.57
SMARCA2-227ENST00000634760 VSIG10Q8N0Z9 540 aa24.87■■□□□ 1.57
SMARCA2-227ENST00000634760 KRT18P05783 430 aaKnown RBP24.86■■□□□ 1.57
SMARCA2-227ENST00000634760 MPHOSPH8Q99549 860 aa24.86■■□□□ 1.57
SMARCA2-227ENST00000634760 PPFIBP1Q86W92 1011 aa24.85■■□□□ 1.57
SMARCA2-227ENST00000634760 SYCP1Q15431 976 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms