RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 WASHC4Q2M389 1173 aa10.08□□□□□ -0.8
LINC00254-202ENST00000633813 PCDHB9Q9Y5E1 797 aa10.07□□□□□ -0.8
LINC00254-202ENST00000633813 GTF3C3Q9Y5Q9 886 aa10.07□□□□□ -0.8
LINC00254-202ENST00000633813 AVPP01185 164 aa10.06□□□□□ -0.8
LINC00254-202ENST00000633813 NNTQ13423 1086 aa10.06□□□□□ -0.8
LINC00254-202ENST00000633813 CTC1Q2NKJ3 1217 aa10.06□□□□□ -0.8
LINC00254-202ENST00000633813 SCRIBQ14160 1630 aa10.06□□□□□ -0.8
LINC00254-202ENST00000633813 FSHRP23945 695 aa10.05□□□□□ -0.8
LINC00254-202ENST00000633813 EIF4G2P78344 907 aaKnown RBP eCLIP10.05□□□□□ -0.8
LINC00254-202ENST00000633813 IRF5Q13568 498 aa10.05□□□□□ -0.8
LINC00254-202ENST00000633813 KCTD15Q96SI1 283 aaPredicted RBP10.05□□□□□ -0.8
LINC00254-202ENST00000633813 GRM5P41594 1212 aa10.04□□□□□ -0.8
LINC00254-202ENST00000633813 DHX9Q08211 1270 aaKnown RBP10.03□□□□□ -0.8
LINC00254-202ENST00000633813 TRAF7Q6Q0C0 670 aa10.03□□□□□ -0.8
LINC00254-202ENST00000633813 HPS1Q92902 700 aa10.03□□□□□ -0.8
LINC00254-202ENST00000633813 POM121Q96HA1 1249 aa10.03□□□□□ -0.8
LINC00254-202ENST00000633813 MYT1Q01538 1121 aa10.02□□□□□ -0.81
LINC00254-202ENST00000633813 CCDC116Q8IYX3 515 aa10.02□□□□□ -0.81
LINC00254-202ENST00000633813 TRIM52Q96A61 297 aa10.02□□□□□ -0.81
LINC00254-202ENST00000633813 AXIN1O15169 862 aa10.01□□□□□ -0.81
LINC00254-202ENST00000633813 SOX11P35716 441 aa10.01□□□□□ -0.81
LINC00254-202ENST00000633813 SMCPP49901 116 aaPredicted RBP10.01□□□□□ -0.81
LINC00254-202ENST00000633813 VAC14Q08AM6 782 aa10.01□□□□□ -0.81
LINC00254-202ENST00000633813 SEPT12Q8IYM1 358 aa10.01□□□□□ -0.81
LINC00254-202ENST00000633813 CRIPAKQ8N1N5 446 aa10.01□□□□□ -0.81
LINC00254-202ENST00000633813 RNF20Q5VTR2 975 aa10□□□□□ -0.81
LINC00254-202ENST00000633813 CCDC125Q86Z20 511 aa10□□□□□ -0.81
LINC00254-202ENST00000633813 EMILIN1Q9Y6C2 1016 aa10□□□□□ -0.81
LINC00254-202ENST00000633813 WDR4P57081 412 aaKnown RBP9.99□□□□□ -0.81
LINC00254-202ENST00000633813 CLUAP1Q96AJ1 413 aa9.99□□□□□ -0.81
LINC00254-202ENST00000633813 CAPN5O15484 640 aaPredicted RBP9.98□□□□□ -0.81
LINC00254-202ENST00000633813 NR3C2P08235 984 aa9.98□□□□□ -0.81
LINC00254-202ENST00000633813 INTS6LQ5JSJ4 861 aaKnown RBP9.98□□□□□ -0.81
LINC00254-202ENST00000633813 PROSER2Q86WR7 435 aaPredicted RBP9.98□□□□□ -0.81
LINC00254-202ENST00000633813 PGPEP1Q9NXJ5 209 aa9.98□□□□□ -0.81
LINC00254-202ENST00000633813 A6NJR5 290 aa9.97□□□□□ -0.81
LINC00254-202ENST00000633813 ESPNB1AK53 854 aa9.97□□□□□ -0.81
LINC00254-202ENST00000633813 SEMA3FQ13275 785 aa9.97□□□□□ -0.81
LINC00254-202ENST00000633813 AAASQ9NRG9 546 aa9.97□□□□□ -0.81
LINC00254-202ENST00000633813 ZIC2O95409 532 aaPredicted RBP9.96□□□□□ -0.82
LINC00254-202ENST00000633813 TIMP2P16035 220 aa9.96□□□□□ -0.82
LINC00254-202ENST00000633813 RAB15P59190 212 aa9.96□□□□□ -0.82
LINC00254-202ENST00000633813 PPP1R26Q5T8A7 1209 aaPredicted RBP9.96□□□□□ -0.82
LINC00254-202ENST00000633813 ST8SIA5O15466 376 aa9.95□□□□□ -0.82
LINC00254-202ENST00000633813 GIGYF1O75420 1035 aaPredicted RBP9.95□□□□□ -0.82
LINC00254-202ENST00000633813 ITPKCQ96DU7 683 aa9.94□□□□□ -0.82
LINC00254-202ENST00000633813 KLF16Q9BXK1 252 aaPredicted RBP9.94□□□□□ -0.82
LINC00254-202ENST00000633813 CEP126Q9P2H0 1117 aa9.94□□□□□ -0.82
LINC00254-202ENST00000633813 SLFNL1Q499Z3 407 aa9.93□□□□□ -0.82
LINC00254-202ENST00000633813 ERVH48-1M5A8F1 160 aa9.92□□□□□ -0.82
LINC00254-202ENST00000633813 ZFAND3Q9H8U3 227 aa9.92□□□□□ -0.82
LINC00254-202ENST00000633813 UNC13AQ9UPW8 1703 aa9.91□□□□□ -0.82
LINC00254-202ENST00000633813 FNBP4Q8N3X1 1017 aaPredicted RBP9.91□□□□□ -0.82
LINC00254-202ENST00000633813 LCE2BO14633 110 aa9.9□□□□□ -0.82
LINC00254-202ENST00000633813 UPP2O95045 317 aa9.9□□□□□ -0.82
LINC00254-202ENST00000633813 BICRAQ9NZM4 1560 aa9.89□□□□□ -0.83
LINC00254-202ENST00000633813 RNF135Q8IUD6 432 aa9.89□□□□□ -0.83
LINC00254-202ENST00000633813 ESF1Q9H501 851 aaKnown RBP9.89□□□□□ -0.83
LINC00254-202ENST00000633813 ALG2Q9H553 416 aa9.89□□□□□ -0.83
LINC00254-202ENST00000633813 ATP13A2Q9NQ11 1180 aa9.89□□□□□ -0.83
LINC00254-202ENST00000633813 SCARF1Q14162 830 aa9.88□□□□□ -0.83
LINC00254-202ENST00000633813 ZNF784Q8NCA9 323 aaPredicted RBP9.88□□□□□ -0.83
LINC00254-202ENST00000633813 TMPRSS4Q9NRS4 437 aa9.88□□□□□ -0.83
LINC00254-202ENST00000633813 PCDHB11Q9Y5F2 797 aa9.88□□□□□ -0.83
LINC00254-202ENST00000633813 POM121CA8CG34 1229 aa9.87□□□□□ -0.83
LINC00254-202ENST00000633813 MRPL14Q6P1L8 145 aaKnown RBP9.87□□□□□ -0.83
LINC00254-202ENST00000633813 MEIOBQ8N635 442 aa9.87□□□□□ -0.83
LINC00254-202ENST00000633813 ZMYND15Q9H091 742 aa9.87□□□□□ -0.83
LINC00254-202ENST00000633813 SENP2Q9HC62 589 aa9.87□□□□□ -0.83
LINC00254-202ENST00000633813 Q6ZVU0 165 aa9.86□□□□□ -0.83
LINC00254-202ENST00000633813 ERICH6Q7L0X2 663 aa9.86□□□□□ -0.83
LINC00254-202ENST00000633813 TSEN34Q9BSV6 310 aaKnown RBP9.86□□□□□ -0.83
LINC00254-202ENST00000633813 DACH1Q9UI36 760 aa9.86□□□□□ -0.83
LINC00254-202ENST00000633813 TRAK2O60296 914 aa9.85□□□□□ -0.83
LINC00254-202ENST00000633813 BMP1P13497 986 aa9.85□□□□□ -0.83
LINC00254-202ENST00000633813 HDGFL1Q5TGJ6 251 aa9.85□□□□□ -0.83
LINC00254-202ENST00000633813 CC2D2BQ6DHV5 1058 aa9.85□□□□□ -0.83
LINC00254-202ENST00000633813 KIFC2Q96AC6 838 aa9.85□□□□□ -0.83
LINC00254-202ENST00000633813 CYLDQ9NQC7 956 aa9.85□□□□□ -0.83
LINC00254-202ENST00000633813 DOLKQ9UPQ8 538 aa9.85□□□□□ -0.83
LINC00254-202ENST00000633813 ERVK-9P63128 1117 aa9.84□□□□□ -0.83
LINC00254-202ENST00000633813 CBLBQ13191 982 aa9.84□□□□□ -0.83
LINC00254-202ENST00000633813 MAP7D1Q3KQU3 841 aa9.84□□□□□ -0.83
LINC00254-202ENST00000633813 LINC00528Q8N1L1 170 aa9.84□□□□□ -0.83
LINC00254-202ENST00000633813 PHTF2Q8N3S3 785 aa9.84□□□□□ -0.83
LINC00254-202ENST00000633813 SIRT1Q96EB6 747 aa9.84□□□□□ -0.83
LINC00254-202ENST00000633813 LILRA1O75019 489 aa9.83□□□□□ -0.84
LINC00254-202ENST00000633813 MYCP01106 439 aaPredicted RBP9.83□□□□□ -0.84
LINC00254-202ENST00000633813 TRIM46Q7Z4K8 759 aa9.83□□□□□ -0.84
LINC00254-202ENST00000633813 C14orf37Q86TY3 774 aa9.83□□□□□ -0.84
LINC00254-202ENST00000633813 GLMNQ92990 594 aa9.83□□□□□ -0.84
LINC00254-202ENST00000633813 CCDC85AQ96PX6 553 aaPredicted RBP9.83□□□□□ -0.84
LINC00254-202ENST00000633813 ADH1AP07327 375 aa9.82□□□□□ -0.84
LINC00254-202ENST00000633813 BMP2P12643 396 aa9.82□□□□□ -0.84
LINC00254-202ENST00000633813 PLPP7Q8NBV4 271 aa9.82□□□□□ -0.84
LINC00254-202ENST00000633813 NFATC2IPQ8NCF5 419 aa9.82□□□□□ -0.84
LINC00254-202ENST00000633813 CALR3Q96L12 384 aaKnown RBP9.82□□□□□ -0.84
LINC00254-202ENST00000633813 GMPR2Q9P2T1 348 aaKnown RBP9.82□□□□□ -0.84
LINC00254-202ENST00000633813 USP4Q13107 963 aa9.81□□□□□ -0.84
LINC00254-202ENST00000633813 C6orf118Q5T5N4 469 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms