RNA–Protein interactions for RNA: ENST00000629277.1

MECP2-218, Transcript of methyl-CpG binding protein 2, humanhuman

Gene MECP2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-218ENST00000629277 EMILIN1Q9Y6C2 1016 aa23.31■■□□□ 1.32
MECP2-218ENST00000629277 FAM135BQ49AJ0 1406 aa23.3■■□□□ 1.32
MECP2-218ENST00000629277 NFE2L2Q16236 605 aa23.3■■□□□ 1.32
MECP2-218ENST00000629277 BRPF1P55201 1214 aaPredicted RBP23.3■■□□□ 1.32
MECP2-218ENST00000629277 C8orf58Q8NAV2 365 aa23.3■■□□□ 1.32
MECP2-218ENST00000629277 FAM83GA6ND36 823 aa23.29■■□□□ 1.32
MECP2-218ENST00000629277 C16orf71Q8IYS4 520 aaPredicted RBP23.29■■□□□ 1.32
MECP2-218ENST00000629277 TRIM44Q96DX7 344 aaPredicted RBP23.29■■□□□ 1.32
MECP2-218ENST00000629277 PIK3C2BO00750 1634 aa23.29■■□□□ 1.32
MECP2-218ENST00000629277 YTHDC2Q9H6S0 1430 aaKnown RBP23.28■■□□□ 1.32
MECP2-218ENST00000629277 DCTN1Q14203 1278 aa23.27■■□□□ 1.32
MECP2-218ENST00000629277 TWISTNBQ3B726 338 aaPredicted RBP23.27■■□□□ 1.32
MECP2-218ENST00000629277 ZRANB1Q9UGI0 708 aa23.27■■□□□ 1.32
MECP2-218ENST00000629277 ISY1Q9ULR0 285 aaKnown RBP23.27■■□□□ 1.32
MECP2-218ENST00000629277 ABCC4O15439 1325 aa23.27■■□□□ 1.32
MECP2-218ENST00000629277 WAPLQ7Z5K2 1190 aa23.27■■□□□ 1.32
MECP2-218ENST00000629277 PTCH1Q13635 1447 aa23.26■■□□□ 1.31
MECP2-218ENST00000629277 ARHGAP45Q92619 1136 aa23.26■■□□□ 1.31
MECP2-218ENST00000629277 CDC45O75419 566 aa23.26■■□□□ 1.31
MECP2-218ENST00000629277 SKOR2Q2VWA4 1001 aaPredicted RBP23.26■■□□□ 1.31
MECP2-218ENST00000629277 NPM1P06748 294 aaKnown RBP eCLIP23.25■■□□□ 1.31
MECP2-218ENST00000629277 ZNF428Q96B54 188 aa23.25■■□□□ 1.31
MECP2-218ENST00000629277 PIK3R4Q99570 1358 aa23.25■■□□□ 1.31
MECP2-218ENST00000629277 PLEKHM2Q8IWE5 1019 aa23.25■■□□□ 1.31
MECP2-218ENST00000629277 OTUD7AQ8TE49 926 aaPredicted RBP23.25■■□□□ 1.31
MECP2-218ENST00000629277 FBXO31Q5XUX0 539 aaPredicted RBP23.24■■□□□ 1.31
MECP2-218ENST00000629277 BAG4O95429 457 aaKnown RBP23.24■■□□□ 1.31
MECP2-218ENST00000629277 PKP1Q13835 747 aa23.24■■□□□ 1.31
MECP2-218ENST00000629277 DDX49Q9Y6V7 483 aaKnown RBP23.24■■□□□ 1.31
MECP2-218ENST00000629277 GNAI1P63096 354 aa23.23■■□□□ 1.31
MECP2-218ENST00000629277 IFT57Q9NWB7 429 aa23.23■■□□□ 1.31
MECP2-218ENST00000629277 APBB1O00213 710 aa23.23■■□□□ 1.31
MECP2-218ENST00000629277 ZNF853P0CG23 659 aa23.23■■□□□ 1.31
MECP2-218ENST00000629277 ZFYVE9O95405 1425 aa23.22■■□□□ 1.31
MECP2-218ENST00000629277 SLC52A1Q9NWF4 448 aa23.22■■□□□ 1.31
MECP2-218ENST00000629277 ANKRD26Q9UPS8 1709 aa23.21■■□□□ 1.31
MECP2-218ENST00000629277 NME9Q86XW9 330 aa23.21■■□□□ 1.31
MECP2-218ENST00000629277 IL13P35225 146 aa23.21■■□□□ 1.31
MECP2-218ENST00000629277 KRT24Q2M2I5 525 aa23.21■■□□□ 1.31
MECP2-218ENST00000629277 NASPP49321 788 aaPredicted RBP23.2■■□□□ 1.3
MECP2-218ENST00000629277 MCTP1Q6DN14 999 aa23.2■■□□□ 1.3
MECP2-218ENST00000629277 ARHGEF40Q8TER5 1519 aa23.2■■□□□ 1.3
MECP2-218ENST00000629277 CHMP4BQ9H444 224 aaKnown RBP23.2■■□□□ 1.3
MECP2-218ENST00000629277 RRS1Q15050 365 aaKnown RBP23.19■■□□□ 1.3
MECP2-218ENST00000629277 MYO5BQ9ULV0 1848 aa23.18■■□□□ 1.3
MECP2-218ENST00000629277 SMARCA5O60264 1052 aaPredicted RBP23.18■■□□□ 1.3
MECP2-218ENST00000629277 NCLP19338 710 aaKnown RBP23.18■■□□□ 1.3
MECP2-218ENST00000629277 GOLGA6L22H0YM25 854 aa23.18■■□□□ 1.3
MECP2-218ENST00000629277 CHAMP1Q96JM3 812 aa23.18■■□□□ 1.3
MECP2-218ENST00000629277 CFAP44Q96MT7 982 aa23.18■■□□□ 1.3
MECP2-218ENST00000629277 KLHL40Q2TBA0 621 aa23.17■■□□□ 1.3
MECP2-218ENST00000629277 TTC22Q5TAA0 569 aa23.17■■□□□ 1.3
MECP2-218ENST00000629277 CDC42BPGQ6DT37 1551 aa23.17■■□□□ 1.3
MECP2-218ENST00000629277 NCKAP5LQ9HCH0 1330 aa23.17■■□□□ 1.3
MECP2-218ENST00000629277 CALD1Q05682 793 aaKnown RBP23.17■■□□□ 1.3
MECP2-218ENST00000629277 HSP90AA2PQ14568 343 aaPredicted RBP23.17■■□□□ 1.3
MECP2-218ENST00000629277 AK9Q5TCS8 1911 aa23.16■■□□□ 1.3
MECP2-218ENST00000629277 USP26Q9BXU7 913 aa23.16■■□□□ 1.3
MECP2-218ENST00000629277 DCTPP1Q9H773 170 aa23.16■■□□□ 1.3
MECP2-218ENST00000629277 API5Q9BZZ5 524 aaKnown RBP23.16■■□□□ 1.3
MECP2-218ENST00000629277 CAVIN1Q6NZI2 390 aaKnown RBP23.15■■□□□ 1.3
MECP2-218ENST00000629277 ZGPATQ8N5A5 531 aaKnown RBP23.15■■□□□ 1.3
MECP2-218ENST00000629277 CLEC17AQ6ZS10 378 aa23.15■■□□□ 1.3
MECP2-218ENST00000629277 KNDC1Q76NI1 1749 aa23.14■■□□□ 1.3
MECP2-218ENST00000629277 PTMSP20962 102 aa23.14■■□□□ 1.3
MECP2-218ENST00000629277 RABEP1Q15276 862 aa23.14■■□□□ 1.3
MECP2-218ENST00000629277 ARHGAP31Q2M1Z3 1444 aa23.14■■□□□ 1.29
MECP2-218ENST00000629277 STAG3Q9UJ98 1225 aa23.14■■□□□ 1.29
MECP2-218ENST00000629277 CLTCQ00610 1675 aaKnown RBP23.13■■□□□ 1.29
MECP2-218ENST00000629277 YEATS2Q9ULM3 1422 aa23.13■■□□□ 1.29
MECP2-218ENST00000629277 CCDC173Q0VFZ6 552 aa23.13■■□□□ 1.29
MECP2-218ENST00000629277 KIF20BQ96Q89 1820 aa23.13■■□□□ 1.29
MECP2-218ENST00000629277 SDSP20132 328 aa23.12■■□□□ 1.29
MECP2-218ENST00000629277 TMEM131LA2VDJ0 1609 aa23.12■■□□□ 1.29
MECP2-218ENST00000629277 PPP1R9BQ96SB3 815 aa23.11■■□□□ 1.29
MECP2-218ENST00000629277 LMBRD1Q9NUN5 540 aa23.11■■□□□ 1.29
MECP2-218ENST00000629277 DIP2CQ9Y2E4 1556 aa23.11■■□□□ 1.29
MECP2-218ENST00000629277 RIMS2Q9UQ26 1411 aa23.11■■□□□ 1.29
MECP2-218ENST00000629277 ALKQ9UM73 1620 aa23.11■■□□□ 1.29
MECP2-218ENST00000629277 ZSCAN23Q3MJ62 389 aa23.1■■□□□ 1.29
MECP2-218ENST00000629277 AEBP1Q8IUX7 1158 aa23.1■■□□□ 1.29
MECP2-218ENST00000629277 RBM27Q9P2N5 1060 aaKnown RBP23.1■■□□□ 1.29
MECP2-218ENST00000629277 CYP2E1P05181 493 aaPredicted RBP23.09■■□□□ 1.29
MECP2-218ENST00000629277 MAP2P11137 1827 aaKnown RBP23.09■■□□□ 1.29
MECP2-218ENST00000629277 FOXD4L5Q5VV16 416 aaPredicted RBP23.09■■□□□ 1.29
MECP2-218ENST00000629277 CEP85Q6P2H3 762 aa23.09■■□□□ 1.29
MECP2-218ENST00000629277 FOXD4L4Q8WXT5 416 aaPredicted RBP23.09■■□□□ 1.29
MECP2-218ENST00000629277 INTS3Q68E01 1043 aaKnown RBP23.08■■□□□ 1.29
MECP2-218ENST00000629277 ANKRD44Q8N8A2 993 aa23.08■■□□□ 1.29
MECP2-218ENST00000629277 PRPF40AO75400 957 aaKnown RBP23.08■■□□□ 1.29
MECP2-218ENST00000629277 MEIS3Q99687 375 aa23.08■■□□□ 1.29
MECP2-218ENST00000629277 ATP10DQ9P241 1426 aa23.08■■□□□ 1.28
MECP2-218ENST00000629277 RBSNQ9H1K0 784 aa23.07■■□□□ 1.28
MECP2-218ENST00000629277 RRP9O43818 475 aaKnown RBP23.07■■□□□ 1.28
MECP2-218ENST00000629277 MCM10Q7L590 875 aa23.07■■□□□ 1.28
MECP2-218ENST00000629277 ZDHHC9Q9Y397 364 aa23.07■■□□□ 1.28
MECP2-218ENST00000629277 NUCB2P80303 420 aa23.06■■□□□ 1.28
MECP2-218ENST00000629277 ZSCAN30Q86W11 494 aa23.06■■□□□ 1.28
MECP2-218ENST00000629277 PRIM1P49642 420 aaKnown RBP23.06■■□□□ 1.28
MECP2-218ENST00000629277 KIAA1211Q6ZU35 1233 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms