RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 FAM187AA6NFU0 413 aa6.46□□□□□ -1.38
CNOT1-223ENST00000628857 ESPNB1AK53 854 aa6.46□□□□□ -1.38
CNOT1-223ENST00000628857 RNF20Q5VTR2 975 aa6.46□□□□□ -1.38
CNOT1-223ENST00000628857 TRAF7Q6Q0C0 670 aa6.46□□□□□ -1.38
CNOT1-223ENST00000628857 CARD14Q9BXL6 1004 aa6.46□□□□□ -1.38
CNOT1-223ENST00000628857 TLL2Q9Y6L7 1015 aa6.46□□□□□ -1.38
CNOT1-223ENST00000628857 MYT1Q01538 1121 aa6.45□□□□□ -1.38
CNOT1-223ENST00000628857 ERICH6Q7L0X2 663 aa6.45□□□□□ -1.38
CNOT1-223ENST00000628857 KCTD15Q96SI1 283 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-223ENST00000628857 KLF16Q9BXK1 252 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-223ENST00000628857 EMILIN1Q9Y6C2 1016 aa6.45□□□□□ -1.38
CNOT1-223ENST00000628857 ABL2P42684 1182 aa6.44□□□□□ -1.38
CNOT1-223ENST00000628857 NNTQ13423 1086 aa6.44□□□□□ -1.38
CNOT1-223ENST00000628857 ARID5BQ14865 1188 aa6.44□□□□□ -1.38
CNOT1-223ENST00000628857 Q6ZNB5 142 aa6.44□□□□□ -1.38
CNOT1-223ENST00000628857 FNBP4Q8N3X1 1017 aaPredicted RBP6.44□□□□□ -1.38
CNOT1-223ENST00000628857 CCDC116Q8IYX3 515 aa6.43□□□□□ -1.38
CNOT1-223ENST00000628857 HPS1Q92902 700 aa6.43□□□□□ -1.38
CNOT1-223ENST00000628857 AXIN1O15169 862 aa6.42□□□□□ -1.38
CNOT1-223ENST00000628857 INTS6LQ5JSJ4 861 aaKnown RBP6.42□□□□□ -1.38
CNOT1-223ENST00000628857 POM121Q96HA1 1249 aa6.42□□□□□ -1.38
CNOT1-223ENST00000628857 AAASQ9NRG9 546 aa6.42□□□□□ -1.38
CNOT1-223ENST00000628857 CEP126Q9P2H0 1117 aa6.42□□□□□ -1.38
CNOT1-223ENST00000628857 PCDHB9Q9Y5E1 797 aa6.42□□□□□ -1.38
CNOT1-223ENST00000628857 FSHRP23945 695 aa6.41□□□□□ -1.38
CNOT1-223ENST00000628857 ALG2Q9H553 416 aa6.41□□□□□ -1.38
CNOT1-223ENST00000628857 PGPEP1Q9NXJ5 209 aa6.41□□□□□ -1.38
CNOT1-223ENST00000628857 CHIC2Q9UKJ5 165 aa6.41□□□□□ -1.38
CNOT1-223ENST00000628857 CAPN5O15484 640 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-223ENST00000628857 NR3C2P08235 984 aa6.4□□□□□ -1.38
CNOT1-223ENST00000628857 TIMP2P16035 220 aa6.4□□□□□ -1.38
CNOT1-223ENST00000628857 WDR4P57081 412 aaKnown RBP6.4□□□□□ -1.38
CNOT1-223ENST00000628857 VAC14Q08AM6 782 aa6.4□□□□□ -1.38
CNOT1-223ENST00000628857 SEMA3FQ13275 785 aa6.4□□□□□ -1.38
CNOT1-223ENST00000628857 PROSER2Q86WR7 435 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-223ENST00000628857 PHTF2Q8N3S3 785 aa6.4□□□□□ -1.38
CNOT1-223ENST00000628857 GIGYF1O75420 1035 aaPredicted RBP6.39□□□□□ -1.39
CNOT1-223ENST00000628857 PPP1R26Q5T8A7 1209 aaPredicted RBP6.39□□□□□ -1.39
CNOT1-223ENST00000628857 ZMYND15Q9H091 742 aa6.39□□□□□ -1.39
CNOT1-223ENST00000628857 LCE2BO14633 110 aa6.38□□□□□ -1.39
CNOT1-223ENST00000628857 LZTS3O60299 673 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-223ENST00000628857 MAP7D1Q3KQU3 841 aa6.38□□□□□ -1.39
CNOT1-223ENST00000628857 Q6ZVU0 165 aa6.38□□□□□ -1.39
CNOT1-223ENST00000628857 NFATC2IPQ8NCF5 419 aa6.38□□□□□ -1.39
CNOT1-223ENST00000628857 CLUAP1Q96AJ1 413 aa6.38□□□□□ -1.39
CNOT1-223ENST00000628857 ERVH48-1M5A8F1 160 aa6.37□□□□□ -1.39
CNOT1-223ENST00000628857 ZIC2O95409 532 aaPredicted RBP6.37□□□□□ -1.39
CNOT1-223ENST00000628857 ITPKCQ96DU7 683 aa6.37□□□□□ -1.39
CNOT1-223ENST00000628857 TRAK2O60296 914 aa6.36□□□□□ -1.39
CNOT1-223ENST00000628857 SLFNL1Q499Z3 407 aa6.36□□□□□ -1.39
CNOT1-223ENST00000628857 SENP2Q9HC62 589 aa6.36□□□□□ -1.39
CNOT1-223ENST00000628857 LILRA1O75019 489 aa6.35□□□□□ -1.39
CNOT1-223ENST00000628857 ERVK-9P63128 1117 aa6.35□□□□□ -1.39
CNOT1-223ENST00000628857 MEIOBQ8N635 442 aa6.35□□□□□ -1.39
CNOT1-223ENST00000628857 KIFC2Q96AC6 838 aa6.35□□□□□ -1.39
CNOT1-223ENST00000628857 SIRT1Q96EB6 747 aa6.35□□□□□ -1.39
CNOT1-223ENST00000628857 TSEN34Q9BSV6 310 aaKnown RBP6.35□□□□□ -1.39
CNOT1-223ENST00000628857 ATP13A2Q9NQ11 1180 aa6.35□□□□□ -1.39
CNOT1-223ENST00000628857 USP4Q13107 963 aa6.34□□□□□ -1.39
CNOT1-223ENST00000628857 MRPL14Q6P1L8 145 aaKnown RBP6.34□□□□□ -1.39
CNOT1-223ENST00000628857 RNF135Q8IUD6 432 aa6.34□□□□□ -1.39
CNOT1-223ENST00000628857 ZFAND3Q9H8U3 227 aa6.34□□□□□ -1.39
CNOT1-223ENST00000628857 ST8SIA5O15466 376 aa6.33□□□□□ -1.4
CNOT1-223ENST00000628857 UPP2O95045 317 aa6.33□□□□□ -1.4
CNOT1-223ENST00000628857 SCARF1Q14162 830 aa6.33□□□□□ -1.4
CNOT1-223ENST00000628857 HDGFL1Q5TGJ6 251 aa6.33□□□□□ -1.4
CNOT1-223ENST00000628857 CC2D2BQ6DHV5 1058 aa6.33□□□□□ -1.4
CNOT1-223ENST00000628857 ZNF784Q8NCA9 323 aaPredicted RBP6.33□□□□□ -1.4
CNOT1-223ENST00000628857 POM121CA8CG34 1229 aa6.32□□□□□ -1.4
CNOT1-223ENST00000628857 ADH1AP07327 375 aa6.32□□□□□ -1.4
CNOT1-223ENST00000628857 ADD1P35611 737 aaKnown RBP6.32□□□□□ -1.4
CNOT1-223ENST00000628857 TRIM46Q7Z4K8 759 aa6.32□□□□□ -1.4
CNOT1-223ENST00000628857 CCDC85AQ96PX6 553 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-223ENST00000628857 TMPRSS4Q9NRS4 437 aa6.32□□□□□ -1.4
CNOT1-223ENST00000628857 ADAMTS19Q8TE59 1207 aa6.31□□□□□ -1.4
CNOT1-223ENST00000628857 TRIM47Q96LD4 638 aa6.31□□□□□ -1.4
CNOT1-223ENST00000628857 DACH1Q9UI36 760 aa6.31□□□□□ -1.4
CNOT1-223ENST00000628857 PCDHB11Q9Y5F2 797 aa6.31□□□□□ -1.4
CNOT1-223ENST00000628857 SPINT1O43278 529 aa6.3□□□□□ -1.4
CNOT1-223ENST00000628857 MYCP01106 439 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-223ENST00000628857 PTGIRP43119 386 aa6.3□□□□□ -1.4
CNOT1-223ENST00000628857 PLEKHM2Q8IWE5 1019 aa6.3□□□□□ -1.4
CNOT1-223ENST00000628857 LINC00528Q8N1L1 170 aa6.3□□□□□ -1.4
CNOT1-223ENST00000628857 PLPP7Q8NBV4 271 aa6.3□□□□□ -1.4
CNOT1-223ENST00000628857 GLMNQ92990 594 aa6.3□□□□□ -1.4
CNOT1-223ENST00000628857 ESF1Q9H501 851 aaKnown RBP6.3□□□□□ -1.4
CNOT1-223ENST00000628857 DOLKQ9UPQ8 538 aa6.3□□□□□ -1.4
CNOT1-223ENST00000628857 GNRH1P01148 92 aa6.29□□□□□ -1.4
CNOT1-223ENST00000628857 RAB15P59190 212 aa6.29□□□□□ -1.4
CNOT1-223ENST00000628857 CBLBQ13191 982 aa6.29□□□□□ -1.4
CNOT1-223ENST00000628857 CYP2U1Q7Z449 544 aa6.29□□□□□ -1.4
CNOT1-223ENST00000628857 CALR3Q96L12 384 aaKnown RBP6.29□□□□□ -1.4
CNOT1-223ENST00000628857 ZFP42Q96MM3 310 aa6.29□□□□□ -1.4
CNOT1-223ENST00000628857 ATP5J2-PTCD1G3V325 749 aa6.28□□□□□ -1.4
CNOT1-223ENST00000628857 ATP9BO43861 1147 aa6.28□□□□□ -1.4
CNOT1-223ENST00000628857 GPC1P35052 558 aa6.28□□□□□ -1.4
CNOT1-223ENST00000628857 TSGA10IPQ3SY00 556 aa6.28□□□□□ -1.4
CNOT1-223ENST00000628857 ZNF787Q6DD87 383 aa6.28□□□□□ -1.4
CNOT1-223ENST00000628857 KDF1Q8NAX2 398 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-223ENST00000628857 CDCA7Q9BWT1 371 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms