RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 COG3Q96JB2 828 aa13.45□□□□□ -0.26
SOX2-OT-249ENST00000628810 GGNBP2Q9H3C7 697 aa13.45□□□□□ -0.26
SOX2-OT-249ENST00000628810 ZRANB1Q9UGI0 708 aa13.45□□□□□ -0.26
SOX2-OT-249ENST00000628810 SMG6Q86US8 1419 aaKnown RBP13.45□□□□□ -0.26
SOX2-OT-249ENST00000628810 AATKQ6ZMQ8 1374 aa13.45□□□□□ -0.26
SOX2-OT-249ENST00000628810 CPDO75976 1380 aa13.44□□□□□ -0.26
SOX2-OT-249ENST00000628810 LRP6O75581 1613 aa13.43□□□□□ -0.26
SOX2-OT-249ENST00000628810 NUTM2GQ5VZR2 741 aa13.43□□□□□ -0.26
SOX2-OT-249ENST00000628810 LMOD2Q6P5Q4 547 aa13.43□□□□□ -0.26
SOX2-OT-249ENST00000628810 CHADLQ6NUI6 762 aa13.42□□□□□ -0.26
SOX2-OT-249ENST00000628810 KCNH5Q8NCM2 988 aa13.42□□□□□ -0.26
SOX2-OT-249ENST00000628810 LMO7Q8WWI1 1683 aa13.42□□□□□ -0.26
SOX2-OT-249ENST00000628810 LTN1O94822 1766 aa13.42□□□□□ -0.26
SOX2-OT-249ENST00000628810 GCP02774 474 aa13.41□□□□□ -0.26
SOX2-OT-249ENST00000628810 CC2D1BQ5T0F9 858 aaKnown RBP13.41□□□□□ -0.26
SOX2-OT-249ENST00000628810 KIF24Q5T7B8 1368 aa13.41□□□□□ -0.26
SOX2-OT-249ENST00000628810 COL18A1P39060 1754 aa13.4□□□□□ -0.26
SOX2-OT-249ENST00000628810 COL14A1Q05707 1796 aaKnown RBP13.4□□□□□ -0.26
SOX2-OT-249ENST00000628810 PEAK1Q9H792 1746 aa13.4□□□□□ -0.26
SOX2-OT-249ENST00000628810 MORC1Q86VD1 984 aa13.4□□□□□ -0.26
SOX2-OT-249ENST00000628810 CABLES1Q8TDN4 633 aa13.4□□□□□ -0.26
SOX2-OT-249ENST00000628810 RTL1A6NKG5 1358 aa13.4□□□□□ -0.26
SOX2-OT-249ENST00000628810 RALBP1Q15311 655 aa13.39□□□□□ -0.27
SOX2-OT-249ENST00000628810 CDK12Q9NYV4 1490 aaPredicted RBP13.39□□□□□ -0.27
SOX2-OT-249ENST00000628810 PLCH1Q4KWH8 1693 aa13.39□□□□□ -0.27
SOX2-OT-249ENST00000628810 KIAA0232Q92628 1395 aa13.38□□□□□ -0.27
SOX2-OT-249ENST00000628810 ARHGEF25Q86VW2 580 aa13.38□□□□□ -0.27
SOX2-OT-249ENST00000628810 PRKRIP1Q9H875 184 aaPredicted RBP13.38□□□□□ -0.27
SOX2-OT-249ENST00000628810 NWD2Q9ULI1 1742 aa13.38□□□□□ -0.27
SOX2-OT-249ENST00000628810 MAP3K19Q56UN5 1328 aa13.37□□□□□ -0.27
SOX2-OT-249ENST00000628810 NRAPQ86VF7 1730 aa13.36□□□□□ -0.27
SOX2-OT-249ENST00000628810 C19orf67A6NJJ6 358 aa13.36□□□□□ -0.27
SOX2-OT-249ENST00000628810 BLMP54132 1417 aaPredicted RBP13.36□□□□□ -0.27
SOX2-OT-249ENST00000628810 MAP2P11137 1827 aaKnown RBP13.36□□□□□ -0.27
SOX2-OT-249ENST00000628810 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.36□□□□□ -0.27
SOX2-OT-249ENST00000628810 INSRP06213 1382 aa13.35□□□□□ -0.27
SOX2-OT-249ENST00000628810 FLT4P35916 1363 aa13.35□□□□□ -0.27
SOX2-OT-249ENST00000628810 SLIT2O94813 1529 aa13.35□□□□□ -0.27
SOX2-OT-249ENST00000628810 HAP1P54257 671 aaPredicted RBP13.35□□□□□ -0.27
SOX2-OT-249ENST00000628810 ILDR1Q86SU0 546 aaPredicted RBP13.35□□□□□ -0.27
SOX2-OT-249ENST00000628810 POLKQ9UBT6 870 aa13.35□□□□□ -0.27
SOX2-OT-249ENST00000628810 MYBBP1AQ9BQG0 1328 aaKnown RBP13.35□□□□□ -0.27
SOX2-OT-249ENST00000628810 COL3A1P02461 1466 aaPredicted RBP13.35□□□□□ -0.27
SOX2-OT-249ENST00000628810 FAM208AQ9UK61 1670 aaKnown RBP13.34□□□□□ -0.27
SOX2-OT-249ENST00000628810 PPP2R1AP30153 589 aa13.34□□□□□ -0.27
SOX2-OT-249ENST00000628810 RRS1Q15050 365 aaKnown RBP13.34□□□□□ -0.27
SOX2-OT-249ENST00000628810 DIEXFQ68CQ4 756 aaKnown RBP13.34□□□□□ -0.27
SOX2-OT-249ENST00000628810 COL5A2P05997 1499 aaPredicted RBP13.34□□□□□ -0.27
SOX2-OT-249ENST00000628810 CAMTA1Q9Y6Y1 1673 aa13.34□□□□□ -0.27
SOX2-OT-249ENST00000628810 SOX12O15370 315 aa13.33□□□□□ -0.28
SOX2-OT-249ENST00000628810 ANP32CO43423 234 aa13.33□□□□□ -0.28
SOX2-OT-249ENST00000628810 FBLN1P23142 703 aa13.33□□□□□ -0.28
SOX2-OT-249ENST00000628810 TNNT2P45379 298 aaPredicted RBP13.33□□□□□ -0.28
SOX2-OT-249ENST00000628810 ZC3H6P61129 1189 aaKnown RBP13.33□□□□□ -0.28
SOX2-OT-249ENST00000628810 PRDM11Q9NQV5 511 aa13.33□□□□□ -0.28
SOX2-OT-249ENST00000628810 EMILIN1Q9Y6C2 1016 aa13.33□□□□□ -0.28
SOX2-OT-249ENST00000628810 NUTM2BA6NNL0 878 aaPredicted RBP13.32□□□□□ -0.28
SOX2-OT-249ENST00000628810 NUTM2EB1AL46 878 aaPredicted RBP13.32□□□□□ -0.28
SOX2-OT-249ENST00000628810 NUTM2AQ8IVF1 878 aaPredicted RBP13.32□□□□□ -0.28
SOX2-OT-249ENST00000628810 IP6K1Q92551 441 aa13.32□□□□□ -0.28
SOX2-OT-249ENST00000628810 RGPD5Q99666 1765 aa13.31□□□□□ -0.28
SOX2-OT-249ENST00000628810 FAM83GA6ND36 823 aa13.31□□□□□ -0.28
SOX2-OT-249ENST00000628810 PLEKHG5O94827 1062 aa13.31□□□□□ -0.28
SOX2-OT-249ENST00000628810 ADAMTS2O95450 1211 aa13.31□□□□□ -0.28
SOX2-OT-249ENST00000628810 HOXC9P31274 260 aa13.31□□□□□ -0.28
SOX2-OT-249ENST00000628810 EVX2Q03828 476 aa13.31□□□□□ -0.28
SOX2-OT-249ENST00000628810 FARP1Q9Y4F1 1045 aaPredicted RBP13.31□□□□□ -0.28
SOX2-OT-249ENST00000628810 RGPD1P0DJD0 1748 aa13.3□□□□□ -0.28
SOX2-OT-249ENST00000628810 MTHFSP49914 203 aa13.3□□□□□ -0.28
SOX2-OT-249ENST00000628810 CNGB1Q14028 1251 aaPredicted RBP13.3□□□□□ -0.28
SOX2-OT-249ENST00000628810 FNBP4Q8N3X1 1017 aaPredicted RBP13.3□□□□□ -0.28
SOX2-OT-249ENST00000628810 NCAPD2Q15021 1401 aa13.3□□□□□ -0.28
SOX2-OT-249ENST00000628810 BCL9LQ86UU0 1499 aa13.29□□□□□ -0.28
SOX2-OT-249ENST00000628810 AMPHP49418 695 aa13.29□□□□□ -0.28
SOX2-OT-249ENST00000628810 CHRNA2Q15822 529 aa13.29□□□□□ -0.28
SOX2-OT-249ENST00000628810 AXIN2Q9Y2T1 843 aa13.29□□□□□ -0.28
SOX2-OT-249ENST00000628810 ERBB3P21860 1342 aa13.29□□□□□ -0.28
SOX2-OT-249ENST00000628810 HSP90AB2PQ58FF8 381 aa13.27□□□□□ -0.29
SOX2-OT-249ENST00000628810 C8orf37Q96NL8 207 aa13.27□□□□□ -0.29
SOX2-OT-249ENST00000628810 MEX3CQ5U5Q3 659 aaKnown RBP13.26□□□□□ -0.29
SOX2-OT-249ENST00000628810 WDR17Q8IZU2 1322 aa13.26□□□□□ -0.29
SOX2-OT-249ENST00000628810 PROM2Q8N271 834 aa13.26□□□□□ -0.29
SOX2-OT-249ENST00000628810 BTG4Q9NY30 223 aa13.26□□□□□ -0.29
SOX2-OT-249ENST00000628810 ATRNO75882 1429 aa13.25□□□□□ -0.29
SOX2-OT-249ENST00000628810 CRB1P82279 1406 aa13.25□□□□□ -0.29
SOX2-OT-249ENST00000628810 ZBTB7CA1YPR0 619 aa13.25□□□□□ -0.29
SOX2-OT-249ENST00000628810 PPM1GO15355 546 aaPredicted RBP13.25□□□□□ -0.29
SOX2-OT-249ENST00000628810 ANKRD24Q8TF21 1146 aa13.25□□□□□ -0.29
SOX2-OT-249ENST00000628810 CFAP53Q96M91 514 aa13.25□□□□□ -0.29
SOX2-OT-249ENST00000628810 WNK3Q9BYP7 1800 aa13.25□□□□□ -0.29
SOX2-OT-249ENST00000628810 AFF2P51816 1311 aa13.24□□□□□ -0.29
SOX2-OT-249ENST00000628810 IL13P35225 146 aa13.24□□□□□ -0.29
SOX2-OT-249ENST00000628810 EIF4A2Q14240 407 aaKnown RBP13.24□□□□□ -0.29
SOX2-OT-249ENST00000628810 UNC5CLQ8IV45 518 aa13.24□□□□□ -0.29
SOX2-OT-249ENST00000628810 NGLY1Q96IV0 654 aa13.24□□□□□ -0.29
SOX2-OT-249ENST00000628810 CREBZFQ9NS37 354 aa13.24□□□□□ -0.29
SOX2-OT-249ENST00000628810 RGPD2P0DJD1 1756 aa13.23□□□□□ -0.29
SOX2-OT-249ENST00000628810 IGSF1Q8N6C5 1336 aa13.23□□□□□ -0.29
SOX2-OT-249ENST00000628810 GLI3P10071 1580 aa13.23□□□□□ -0.29
SOX2-OT-249ENST00000628810 KDRP35968 1356 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms