RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 PLEKHO1Q53GL0 409 aaPredicted RBP16.12■□□□□ 0.17
SYNGAP1-207ENST00000628646 ZNF521Q96K83 1311 aa16.12■□□□□ 0.17
SYNGAP1-207ENST00000628646 RIPK4P57078 832 aa16.12■□□□□ 0.17
SYNGAP1-207ENST00000628646 ANP32EQ9BTT0 268 aa16.12■□□□□ 0.17
SYNGAP1-207ENST00000628646 RRP1P56182 461 aaKnown RBP16.11■□□□□ 0.17
SYNGAP1-207ENST00000628646 LMOD3Q0VAK6 560 aa16.11■□□□□ 0.17
SYNGAP1-207ENST00000628646 RUNDC1Q96C34 613 aa16.11■□□□□ 0.17
SYNGAP1-207ENST00000628646 ZNF530Q6P9A1 599 aaPredicted RBP16.1■□□□□ 0.17
SYNGAP1-207ENST00000628646 ARHGEF28Q8N1W1 1705 aaKnown RBP16.1■□□□□ 0.17
SYNGAP1-207ENST00000628646 SHPRHQ149N8 1683 aa16.1■□□□□ 0.17
SYNGAP1-207ENST00000628646 HOXC9P31274 260 aa16.09■□□□□ 0.17
SYNGAP1-207ENST00000628646 CALD1Q05682 793 aaKnown RBP16.09■□□□□ 0.17
SYNGAP1-207ENST00000628646 KAT6BQ8WYB5 2073 aa16.09■□□□□ 0.17
SYNGAP1-207ENST00000628646 IP6K1Q92551 441 aa16.08■□□□□ 0.17
SYNGAP1-207ENST00000628646 FLT4P35916 1363 aa16.08■□□□□ 0.16
SYNGAP1-207ENST00000628646 ZNF330Q9Y3S2 320 aaPredicted RBP16.08■□□□□ 0.16
SYNGAP1-207ENST00000628646 MST1RQ04912 1400 aa16.08■□□□□ 0.16
SYNGAP1-207ENST00000628646 USP32Q8NFA0 1604 aa16.08■□□□□ 0.16
SYNGAP1-207ENST00000628646 KIAA0232Q92628 1395 aa16.08■□□□□ 0.16
SYNGAP1-207ENST00000628646 TCP11L2Q8N4U5 519 aa16.08■□□□□ 0.16
SYNGAP1-207ENST00000628646 DCCP43146 1447 aa16.07■□□□□ 0.16
SYNGAP1-207ENST00000628646 USP21Q9UK80 565 aa16.07■□□□□ 0.16
SYNGAP1-207ENST00000628646 RCAN3Q9UKA8 241 aa16.07■□□□□ 0.16
SYNGAP1-207ENST00000628646 SPG7Q9UQ90 795 aa16.07■□□□□ 0.16
SYNGAP1-207ENST00000628646 EIF4A2Q14240 407 aaKnown RBP16.07■□□□□ 0.16
SYNGAP1-207ENST00000628646 GAS2L2Q8NHY3 880 aa16.07■□□□□ 0.16
SYNGAP1-207ENST00000628646 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.05■□□□□ 0.16
SYNGAP1-207ENST00000628646 EXOC5O00471 708 aa16.05■□□□□ 0.16
SYNGAP1-207ENST00000628646 FCHSD2O94868 740 aa16.05■□□□□ 0.16
SYNGAP1-207ENST00000628646 BCL11AQ9H165 835 aa16.05■□□□□ 0.16
SYNGAP1-207ENST00000628646 TNS3Q68CZ2 1445 aa16.04■□□□□ 0.16
SYNGAP1-207ENST00000628646 AEBP1Q8IUX7 1158 aa16.04■□□□□ 0.16
SYNGAP1-207ENST00000628646 NRXN3Q9Y4C0 1643 aa16.04■□□□□ 0.16
SYNGAP1-207ENST00000628646 EXOC6Q8TAG9 804 aa16.03■□□□□ 0.16
SYNGAP1-207ENST00000628646 ELL2O00472 640 aaPredicted RBP16.03■□□□□ 0.16
SYNGAP1-207ENST00000628646 TTC5Q8N0Z6 440 aa16.03■□□□□ 0.16
SYNGAP1-207ENST00000628646 POLR3AO14802 1390 aaPredicted RBP16.03■□□□□ 0.16
SYNGAP1-207ENST00000628646 JCADQ9P266 1359 aa16.03■□□□□ 0.16
SYNGAP1-207ENST00000628646 GOLGA2Q08379 1002 aa16.02■□□□□ 0.16
SYNGAP1-207ENST00000628646 ARHGEF25Q86VW2 580 aa16.02■□□□□ 0.16
SYNGAP1-207ENST00000628646 EYA1Q99502 592 aa16.02■□□□□ 0.16
SYNGAP1-207ENST00000628646 SBNO1A3KN83 1393 aa16.02■□□□□ 0.15
SYNGAP1-207ENST00000628646 CCDC136Q96JN2 1154 aa16.02■□□□□ 0.15
SYNGAP1-207ENST00000628646 MYH16Q9H6N6 1097 aa16.02■□□□□ 0.15
SYNGAP1-207ENST00000628646 SOS2Q07890 1332 aaPredicted RBP16.01■□□□□ 0.15
SYNGAP1-207ENST00000628646 TRMT2AQ8IZ69 625 aaKnown RBP16.01■□□□□ 0.15
SYNGAP1-207ENST00000628646 DUSP27Q5VZP5 1158 aa16■□□□□ 0.15
SYNGAP1-207ENST00000628646 FAM98CQ17RN3 349 aaKnown RBP16■□□□□ 0.15
SYNGAP1-207ENST00000628646 LARP1Q6PKG0 1096 aaKnown RBP15.99■□□□□ 0.15
SYNGAP1-207ENST00000628646 DDB1Q16531 1140 aa15.99■□□□□ 0.15
SYNGAP1-207ENST00000628646 CDC42BPGQ6DT37 1551 aa15.99■□□□□ 0.15
SYNGAP1-207ENST00000628646 CPSF1Q10570 1443 aaKnown RBP15.99■□□□□ 0.15
SYNGAP1-207ENST00000628646 FAM83GA6ND36 823 aa15.99■□□□□ 0.15
SYNGAP1-207ENST00000628646 IL2RBP14784 551 aa15.99■□□□□ 0.15
SYNGAP1-207ENST00000628646 CABP4P57796 275 aa15.98■□□□□ 0.15
SYNGAP1-207ENST00000628646 FRAT1Q92837 279 aaPredicted RBP15.98■□□□□ 0.15
SYNGAP1-207ENST00000628646 AMOTQ4VCS5 1084 aa15.98■□□□□ 0.15
SYNGAP1-207ENST00000628646 TSPYL4Q9UJ04 414 aa15.98■□□□□ 0.15
SYNGAP1-207ENST00000628646 NBPF6Q5VWK0 638 aa15.97■□□□□ 0.15
SYNGAP1-207ENST00000628646 MPRIPQ6WCQ1 1025 aa15.97■□□□□ 0.15
SYNGAP1-207ENST00000628646 NBPF4Q96M43 638 aa15.97■□□□□ 0.15
SYNGAP1-207ENST00000628646 QTRT2Q9H974 415 aaKnown RBP15.97■□□□□ 0.15
SYNGAP1-207ENST00000628646 FBXO41Q8TF61 875 aa15.97■□□□□ 0.15
SYNGAP1-207ENST00000628646 CHD2O14647 1828 aaKnown RBP15.97■□□□□ 0.15
SYNGAP1-207ENST00000628646 ZCRB1Q8TBF4 217 aaKnown RBP15.97■□□□□ 0.15
SYNGAP1-207ENST00000628646 SF3B2Q13435 895 aaKnown RBP15.97■□□□□ 0.15
SYNGAP1-207ENST00000628646 DCTN1Q14203 1278 aa15.97■□□□□ 0.15
SYNGAP1-207ENST00000628646 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.96■□□□□ 0.15
SYNGAP1-207ENST00000628646 THUMPD2Q9BTF0 503 aaKnown RBP15.96■□□□□ 0.15
SYNGAP1-207ENST00000628646 NPHP1O15259 732 aa15.96■□□□□ 0.14
SYNGAP1-207ENST00000628646 HSP90AB1P08238 724 aaKnown RBP15.96■□□□□ 0.14
SYNGAP1-207ENST00000628646 NFE2L2Q16236 605 aa15.96■□□□□ 0.14
SYNGAP1-207ENST00000628646 RBM42Q9BTD8 480 aaKnown RBP15.96■□□□□ 0.14
SYNGAP1-207ENST00000628646 GNAT3A8MTJ3 354 aa15.95■□□□□ 0.14
SYNGAP1-207ENST00000628646 EIF2S2P20042 333 aaKnown RBP15.95■□□□□ 0.14
SYNGAP1-207ENST00000628646 TMPOP42166 694 aaKnown RBP15.95■□□□□ 0.14
SYNGAP1-207ENST00000628646 MCM10Q7L590 875 aa15.95■□□□□ 0.14
SYNGAP1-207ENST00000628646 SPINK5Q9NQ38 1064 aaPredicted RBP15.95■□□□□ 0.14
SYNGAP1-207ENST00000628646 PLIN1O60240 522 aa15.95■□□□□ 0.14
SYNGAP1-207ENST00000628646 NECTIN2Q92692 538 aa15.95■□□□□ 0.14
SYNGAP1-207ENST00000628646 IQSEC2Q5JU85 1478 aa15.95■□□□□ 0.14
SYNGAP1-207ENST00000628646 AFF2P51816 1311 aa15.95■□□□□ 0.14
SYNGAP1-207ENST00000628646 TRPC5Q9UL62 973 aaPredicted RBP15.94■□□□□ 0.14
SYNGAP1-207ENST00000628646 IL13P35225 146 aa15.94■□□□□ 0.14
SYNGAP1-207ENST00000628646 IFNL2Q8IZJ0 200 aa15.94■□□□□ 0.14
SYNGAP1-207ENST00000628646 C20orf194Q5TEA3 1177 aa15.94■□□□□ 0.14
SYNGAP1-207ENST00000628646 AXIN2Q9Y2T1 843 aa15.94■□□□□ 0.14
SYNGAP1-207ENST00000628646 STK31Q9BXU1 1019 aa15.93■□□□□ 0.14
SYNGAP1-207ENST00000628646 SLFN5Q08AF3 891 aa15.93■□□□□ 0.14
SYNGAP1-207ENST00000628646 NGEFQ8N5V2 710 aa15.93■□□□□ 0.14
SYNGAP1-207ENST00000628646 SPATA31A6Q5VVP1 1343 aa15.93■□□□□ 0.14
SYNGAP1-207ENST00000628646 SETD1AO15047 1707 aaKnown RBP15.92■□□□□ 0.14
SYNGAP1-207ENST00000628646 XRN1Q8IZH2 1706 aaKnown RBP15.92■□□□□ 0.14
SYNGAP1-207ENST00000628646 GNAI1P63096 354 aa15.92■□□□□ 0.14
SYNGAP1-207ENST00000628646 ACSBG1Q96GR2 724 aa15.92■□□□□ 0.14
SYNGAP1-207ENST00000628646 UNC5CLQ8IV45 518 aa15.92■□□□□ 0.14
SYNGAP1-207ENST00000628646 STRCQ7RTU9 1775 aa15.92■□□□□ 0.14
SYNGAP1-207ENST00000628646 TCERG1O14776 1098 aaKnown RBP15.92■□□□□ 0.14
SYNGAP1-207ENST00000628646 ZNF772Q68DY9 489 aaPredicted RBP15.91■□□□□ 0.14
SYNGAP1-207ENST00000628646 AATKQ6ZMQ8 1374 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms