RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 TAF7LQ5H9L4 462 aa21.13■□□□□ 0.97
FARP1-242ENST00000627049 THUMPD2Q9BTF0 503 aaKnown RBP21.13■□□□□ 0.97
FARP1-242ENST00000627049 UPF3BQ9BZI7 483 aaKnown RBP21.13■□□□□ 0.97
FARP1-242ENST00000627049 LARP1BQ659C4 914 aaKnown RBP21.13■□□□□ 0.97
FARP1-242ENST00000627049 LRSAM1Q6UWE0 723 aa21.13■□□□□ 0.97
FARP1-242ENST00000627049 NUP62CLQ9H1M0 184 aa21.13■□□□□ 0.97
FARP1-242ENST00000627049 PLB1Q6P1J6 1458 aa21.13■□□□□ 0.97
FARP1-242ENST00000627049 ASXL1Q8IXJ9 1541 aa21.13■□□□□ 0.97
FARP1-242ENST00000627049 TNNQ9UQP3 1299 aa21.12■□□□□ 0.97
FARP1-242ENST00000627049 HS1BP3Q53T59 392 aa21.12■□□□□ 0.97
FARP1-242ENST00000627049 SPINK5Q9NQ38 1064 aaPredicted RBP21.12■□□□□ 0.97
FARP1-242ENST00000627049 ZKSCAN5Q9Y2L8 839 aa21.12■□□□□ 0.97
FARP1-242ENST00000627049 SMARCA5O60264 1052 aaPredicted RBP21.12■□□□□ 0.97
FARP1-242ENST00000627049 PRIMPOLQ96LW4 560 aa21.11■□□□□ 0.97
FARP1-242ENST00000627049 SPATA31E1Q6ZUB1 1445 aa21.11■□□□□ 0.97
FARP1-242ENST00000627049 GPATCH8Q9UKJ3 1502 aaKnown RBP21.11■□□□□ 0.97
FARP1-242ENST00000627049 SYNE3Q6ZMZ3 975 aa21.11■□□□□ 0.97
FARP1-242ENST00000627049 SULT6B1Q6IMI4 303 aa21.1■□□□□ 0.97
FARP1-242ENST00000627049 TAF3Q5VWG9 929 aa21.1■□□□□ 0.97
FARP1-242ENST00000627049 FSD1Q9BTV5 496 aa21.1■□□□□ 0.97
FARP1-242ENST00000627049 TSR1Q2NL82 804 aaKnown RBP21.1■□□□□ 0.97
FARP1-242ENST00000627049 ZSCAN31Q96LW9 406 aaPredicted RBP21.09■□□□□ 0.97
FARP1-242ENST00000627049 INSRP06213 1382 aa21.09■□□□□ 0.97
FARP1-242ENST00000627049 DDX58O95786 925 aaKnown RBP21.09■□□□□ 0.97
FARP1-242ENST00000627049 ZNF330Q9Y3S2 320 aaPredicted RBP21.09■□□□□ 0.97
FARP1-242ENST00000627049 IFT140Q96RY7 1462 aa21.09■□□□□ 0.97
FARP1-242ENST00000627049 SMC2O95347 1197 aa21.09■□□□□ 0.97
FARP1-242ENST00000627049 MAP3K11Q16584 847 aa21.09■□□□□ 0.97
FARP1-242ENST00000627049 LRRFIP1Q32MZ4 808 aaKnown RBP21.09■□□□□ 0.97
FARP1-242ENST00000627049 CDK19Q9BWU1 502 aa21.09■□□□□ 0.97
FARP1-242ENST00000627049 ZHX1Q9UKY1 873 aaPredicted RBP21.09■□□□□ 0.97
FARP1-242ENST00000627049 EXOC6BQ9Y2D4 811 aa21.09■□□□□ 0.97
FARP1-242ENST00000627049 ATAD2Q6PL18 1390 aa21.09■□□□□ 0.97
FARP1-242ENST00000627049 HIP1O00291 1037 aa21.09■□□□□ 0.97
FARP1-242ENST00000627049 C1orf141Q5JVX7 400 aa21.09■□□□□ 0.97
FARP1-242ENST00000627049 CWC15Q9P013 229 aaKnown RBP21.08■□□□□ 0.97
FARP1-242ENST00000627049 HOOK1Q9UJC3 728 aaKnown RBP21.08■□□□□ 0.97
FARP1-242ENST00000627049 RBM42Q9BTD8 480 aaKnown RBP21.08■□□□□ 0.97
FARP1-242ENST00000627049 ZMYM4Q5VZL5 1548 aa21.08■□□□□ 0.97
FARP1-242ENST00000627049 PIK3C2GO75747 1445 aa21.08■□□□□ 0.97
FARP1-242ENST00000627049 TOMM22Q9NS69 142 aa21.08■□□□□ 0.96
FARP1-242ENST00000627049 NOM1Q5C9Z4 860 aaKnown RBP21.08■□□□□ 0.96
FARP1-242ENST00000627049 IL16Q14005 1332 aa21.08■□□□□ 0.96
FARP1-242ENST00000627049 GAS2L2Q8NHY3 880 aa21.07■□□□□ 0.96
FARP1-242ENST00000627049 RPGRIP1LQ68CZ1 1315 aa21.07■□□□□ 0.96
FARP1-242ENST00000627049 CCP110O43303 1012 aa21.07■□□□□ 0.96
FARP1-242ENST00000627049 TRIM29Q14134 588 aa21.07■□□□□ 0.96
FARP1-242ENST00000627049 UVSSAQ2YD98 709 aa21.07■□□□□ 0.96
FARP1-242ENST00000627049 ARHGEF12Q9NZN5 1544 aa21.07■□□□□ 0.96
FARP1-242ENST00000627049 MAP4K4O95819 1239 aaPredicted RBP21.07■□□□□ 0.96
FARP1-242ENST00000627049 ANKRD1Q15327 319 aa21.07■□□□□ 0.96
FARP1-242ENST00000627049 UHRF1BP1Q6BDS2 1440 aa21.07■□□□□ 0.96
FARP1-242ENST00000627049 PES1O00541 588 aaKnown RBP21.07■□□□□ 0.96
FARP1-242ENST00000627049 ADCY5O95622 1261 aa21.07■□□□□ 0.96
FARP1-242ENST00000627049 SETQ01105 290 aaPredicted RBP21.07■□□□□ 0.96
FARP1-242ENST00000627049 RASSF8Q8NHQ8 419 aa21.07■□□□□ 0.96
FARP1-242ENST00000627049 SPATA32Q96LK8 384 aa21.07■□□□□ 0.96
FARP1-242ENST00000627049 FMNL2Q96PY5 1086 aa21.07■□□□□ 0.96
FARP1-242ENST00000627049 GDPD2Q9HCC8 539 aa21.07■□□□□ 0.96
FARP1-242ENST00000627049 PDIA4P13667 645 aaKnown RBP21.06■□□□□ 0.96
FARP1-242ENST00000627049 HSP90B2PQ58FF3 399 aa21.06■□□□□ 0.96
FARP1-242ENST00000627049 PPP4R3BQ5MIZ7 849 aa21.06■□□□□ 0.96
FARP1-242ENST00000627049 PDRG1Q9NUG6 133 aa21.06■□□□□ 0.96
FARP1-242ENST00000627049 CSB-PGBD3P0DP91 1061 aa21.06■□□□□ 0.96
FARP1-242ENST00000627049 NOC3LQ8WTT2 800 aaKnown RBP21.06■□□□□ 0.96
FARP1-242ENST00000627049 ADGRF5Q8IZF2 1346 aa21.06■□□□□ 0.96
FARP1-242ENST00000627049 PRIM1P49642 420 aaKnown RBP21.06■□□□□ 0.96
FARP1-242ENST00000627049 MX1P20591 662 aa21.06■□□□□ 0.96
FARP1-242ENST00000627049 CEBPZQ03701 1054 aaKnown RBP21.06■□□□□ 0.96
FARP1-242ENST00000627049 TTC22Q5TAA0 569 aa21.06■□□□□ 0.96
FARP1-242ENST00000627049 EID1Q9Y6B2 187 aa21.06■□□□□ 0.96
FARP1-242ENST00000627049 IL1RAPL2Q9NP60 686 aa21.05■□□□□ 0.96
FARP1-242ENST00000627049 NUP160Q12769 1436 aa21.05■□□□□ 0.96
FARP1-242ENST00000627049 TULP1O00294 542 aaPredicted RBP21.05■□□□□ 0.96
FARP1-242ENST00000627049 JAKMIP1Q96N16 626 aaKnown RBP21.05■□□□□ 0.96
FARP1-242ENST00000627049 ACBD3Q9H3P7 528 aa21.04■□□□□ 0.96
FARP1-242ENST00000627049 CCDC70Q6NSX1 233 aa21.04■□□□□ 0.96
FARP1-242ENST00000627049 POLR3AO14802 1390 aaPredicted RBP21.04■□□□□ 0.96
FARP1-242ENST00000627049 PPP6R1Q9UPN7 881 aa21.04■□□□□ 0.96
FARP1-242ENST00000627049 PZPP20742 1482 aa21.04■□□□□ 0.96
FARP1-242ENST00000627049 BLMP54132 1417 aaPredicted RBP21.04■□□□□ 0.96
FARP1-242ENST00000627049 DHX8Q14562 1220 aaKnown RBP21.04■□□□□ 0.96
FARP1-242ENST00000627049 FILIP1Q7Z7B0 1213 aa21.04■□□□□ 0.96
FARP1-242ENST00000627049 ZNF396Q96N95 335 aaPredicted RBP21.03■□□□□ 0.96
FARP1-242ENST00000627049 CWC27Q6UX04 472 aaKnown RBP21.03■□□□□ 0.96
FARP1-242ENST00000627049 KIF14Q15058 1648 aa21.03■□□□□ 0.96
FARP1-242ENST00000627049 OLFM4Q6UX06 510 aa21.03■□□□□ 0.96
FARP1-242ENST00000627049 MRC2Q9UBG0 1479 aa21.03■□□□□ 0.96
FARP1-242ENST00000627049 PDILTQ8N807 584 aa21.02■□□□□ 0.96
FARP1-242ENST00000627049 ERC1Q8IUD2 1116 aa21.02■□□□□ 0.96
FARP1-242ENST00000627049 RBM25P49756 843 aaKnown RBP21.01■□□□□ 0.95
FARP1-242ENST00000627049 STK3Q13188 491 aa21.01■□□□□ 0.95
FARP1-242ENST00000627049 NOLC1Q14978 699 aaKnown RBP eCLIP21.01■□□□□ 0.95
FARP1-242ENST00000627049 CAMK4Q16566 473 aa21.01■□□□□ 0.95
FARP1-242ENST00000627049 BLOC1S2Q6QNY1 142 aa21.01■□□□□ 0.95
FARP1-242ENST00000627049 ARHGAP45Q92619 1136 aa21.01■□□□□ 0.95
FARP1-242ENST00000627049 CASTP20810 708 aaKnown RBP21.01■□□□□ 0.95
FARP1-242ENST00000627049 TRDNQ13061 729 aa21.01■□□□□ 0.95
FARP1-242ENST00000627049 TMX3Q96JJ7 454 aa21■□□□□ 0.95
FARP1-242ENST00000627049 NSD2O96028 1365 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms