RNA–Protein interactions for RNA: ENST00000626177.2

CCDC163-202, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-202ENST00000626177 FCHSD2O94868 740 aa11.94□□□□□ -0.5
CCDC163-202ENST00000626177 RIPK4P57078 832 aa11.94□□□□□ -0.5
CCDC163-202ENST00000626177 EIF4A2Q14240 407 aaKnown RBP11.94□□□□□ -0.5
CCDC163-202ENST00000626177 CCDC27Q2M243 656 aa11.94□□□□□ -0.5
CCDC163-202ENST00000626177 FBXO3Q9UK99 471 aa11.94□□□□□ -0.5
CCDC163-202ENST00000626177 ADGRL3Q9HAR2 1447 aa11.94□□□□□ -0.5
CCDC163-202ENST00000626177 PEAK1Q9H792 1746 aa11.94□□□□□ -0.5
CCDC163-202ENST00000626177 USP31Q70CQ4 1352 aa11.93□□□□□ -0.5
CCDC163-202ENST00000626177 LRRC7Q96NW7 1537 aa11.93□□□□□ -0.5
CCDC163-202ENST00000626177 TTC21AQ8NDW8 1320 aa11.93□□□□□ -0.5
CCDC163-202ENST00000626177 NLRP6P59044 892 aa11.93□□□□□ -0.5
CCDC163-202ENST00000626177 AEBP1Q8IUX7 1158 aa11.93□□□□□ -0.5
CCDC163-202ENST00000626177 WDR63Q8IWG1 891 aa11.93□□□□□ -0.5
CCDC163-202ENST00000626177 CRBNQ96SW2 442 aa11.93□□□□□ -0.5
CCDC163-202ENST00000626177 PIK3C2AO00443 1686 aa11.93□□□□□ -0.5
CCDC163-202ENST00000626177 XPCQ01831 940 aaPredicted RBP11.92□□□□□ -0.5
CCDC163-202ENST00000626177 TSR2Q969E8 191 aaKnown RBP11.92□□□□□ -0.5
CCDC163-202ENST00000626177 MAP3K19Q56UN5 1328 aa11.92□□□□□ -0.5
CCDC163-202ENST00000626177 PLEKHG5O94827 1062 aa11.91□□□□□ -0.5
CCDC163-202ENST00000626177 ABTB2Q8N961 1025 aa11.91□□□□□ -0.5
CCDC163-202ENST00000626177 TSHZ2Q9NRE2 1034 aa11.91□□□□□ -0.5
CCDC163-202ENST00000626177 THUMPD2Q9BTF0 503 aaKnown RBP11.91□□□□□ -0.5
CCDC163-202ENST00000626177 STRCP1A6NGW2 1772 aa11.9□□□□□ -0.5
CCDC163-202ENST00000626177 NWD1Q149M9 1564 aa11.9□□□□□ -0.5
CCDC163-202ENST00000626177 FOXO3O43524 673 aa11.9□□□□□ -0.51
CCDC163-202ENST00000626177 SULT6B1Q6IMI4 303 aa11.9□□□□□ -0.51
CCDC163-202ENST00000626177 CCDC136Q96JN2 1154 aa11.9□□□□□ -0.51
CCDC163-202ENST00000626177 MARF1Q9Y4F3 1742 aaKnown RBP11.89□□□□□ -0.51
CCDC163-202ENST00000626177 PSME1Q06323 249 aa11.89□□□□□ -0.51
CCDC163-202ENST00000626177 NFE2L2Q16236 605 aa11.88□□□□□ -0.51
CCDC163-202ENST00000626177 BCL2L13Q9BXK5 485 aa11.88□□□□□ -0.51
CCDC163-202ENST00000626177 FANCIQ9NVI1 1328 aa11.88□□□□□ -0.51
CCDC163-202ENST00000626177 FAM83GA6ND36 823 aa11.87□□□□□ -0.51
CCDC163-202ENST00000626177 EXOSC9Q06265 439 aaKnown RBP11.87□□□□□ -0.51
CCDC163-202ENST00000626177 DDX17Q92841 729 aaKnown RBP11.87□□□□□ -0.51
CCDC163-202ENST00000626177 PNNQ9H307 717 aaKnown RBP11.87□□□□□ -0.51
CCDC163-202ENST00000626177 TNNQ9UQP3 1299 aa11.87□□□□□ -0.51
CCDC163-202ENST00000626177 TMEM94Q12767 1356 aa11.87□□□□□ -0.51
CCDC163-202ENST00000626177 AMPHP49418 695 aa11.87□□□□□ -0.51
CCDC163-202ENST00000626177 RARSP54136 660 aaKnown RBP11.87□□□□□ -0.51
CCDC163-202ENST00000626177 DCTN1Q14203 1278 aa11.87□□□□□ -0.51
CCDC163-202ENST00000626177 C19orf44Q9H6X5 657 aa11.86□□□□□ -0.51
CCDC163-202ENST00000626177 LAS1LQ9Y4W2 734 aaKnown RBP11.86□□□□□ -0.51
CCDC163-202ENST00000626177 MYH16Q9H6N6 1097 aa11.86□□□□□ -0.51
CCDC163-202ENST00000626177 LMTK3Q96Q04 1460 aa11.85□□□□□ -0.51
CCDC163-202ENST00000626177 LTV1Q96GA3 475 aaPredicted RBP11.85□□□□□ -0.51
CCDC163-202ENST00000626177 SBNO1A3KN83 1393 aa11.85□□□□□ -0.51
CCDC163-202ENST00000626177 HOXC9P31274 260 aa11.84□□□□□ -0.51
CCDC163-202ENST00000626177 EYA1Q99502 592 aa11.84□□□□□ -0.51
CCDC163-202ENST00000626177 C1orf167Q5SNV9 1468 aa11.84□□□□□ -0.51
CCDC163-202ENST00000626177 ZBTB7CA1YPR0 619 aa11.84□□□□□ -0.51
CCDC163-202ENST00000626177 NEFMP07197 916 aa11.84□□□□□ -0.51
CCDC163-202ENST00000626177 LMOD2Q6P5Q4 547 aa11.84□□□□□ -0.51
CCDC163-202ENST00000626177 PANK1Q8TE04 598 aa11.84□□□□□ -0.51
CCDC163-202ENST00000626177 FRAT1Q92837 279 aaPredicted RBP11.84□□□□□ -0.51
CCDC163-202ENST00000626177 FLT4P35916 1363 aa11.84□□□□□ -0.51
CCDC163-202ENST00000626177 RGPD1P0DJD0 1748 aa11.83□□□□□ -0.52
CCDC163-202ENST00000626177 KRT28Q7Z3Y7 464 aa11.83□□□□□ -0.52
CCDC163-202ENST00000626177 STRCQ7RTU9 1775 aa11.83□□□□□ -0.52
CCDC163-202ENST00000626177 DLG5Q8TDM6 1919 aa11.82□□□□□ -0.52
CCDC163-202ENST00000626177 IL16Q14005 1332 aa11.82□□□□□ -0.52
CCDC163-202ENST00000626177 SKAP1Q86WV1 359 aa11.82□□□□□ -0.52
CCDC163-202ENST00000626177 ATF3P18847 181 aa11.82□□□□□ -0.52
CCDC163-202ENST00000626177 USHBP1Q8N6Y0 703 aa11.82□□□□□ -0.52
CCDC163-202ENST00000626177 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.82□□□□□ -0.52
CCDC163-202ENST00000626177 RLBP1P12271 317 aa11.81□□□□□ -0.52
CCDC163-202ENST00000626177 MST1RQ04912 1400 aa11.81□□□□□ -0.52
CCDC163-202ENST00000626177 ZNF335Q9H4Z2 1342 aaPredicted RBP11.81□□□□□ -0.52
CCDC163-202ENST00000626177 MTHFSDQ2M296 383 aaKnown RBP11.8□□□□□ -0.52
CCDC163-202ENST00000626177 MCM10Q7L590 875 aa11.8□□□□□ -0.52
CCDC163-202ENST00000626177 SSH1Q8WYL5 1049 aa11.8□□□□□ -0.52
CCDC163-202ENST00000626177 COG6Q9Y2V7 657 aa11.8□□□□□ -0.52
CCDC163-202ENST00000626177 USP54Q70EL1 1684 aa11.8□□□□□ -0.52
CCDC163-202ENST00000626177 TSPYL6Q8N831 410 aa11.8□□□□□ -0.52
CCDC163-202ENST00000626177 NFAT5O94916 1531 aa11.8□□□□□ -0.52
CCDC163-202ENST00000626177 IGSF1Q8N6C5 1336 aa11.79□□□□□ -0.52
CCDC163-202ENST00000626177 ELL2O00472 640 aaPredicted RBP11.79□□□□□ -0.52
CCDC163-202ENST00000626177 ZNF853P0CG23 659 aa11.79□□□□□ -0.52
CCDC163-202ENST00000626177 CANXP27824 592 aaKnown RBP11.79□□□□□ -0.52
CCDC163-202ENST00000626177 CLUAP1Q96AJ1 413 aa11.79□□□□□ -0.52
CCDC163-202ENST00000626177 MBIPQ9NS73 344 aa11.79□□□□□ -0.52
CCDC163-202ENST00000626177 ARHGEF10O15013 1369 aa11.79□□□□□ -0.52
CCDC163-202ENST00000626177 GCP02774 474 aa11.79□□□□□ -0.52
CCDC163-202ENST00000626177 TCERG1O14776 1098 aaKnown RBP11.78□□□□□ -0.52
CCDC163-202ENST00000626177 IP6K1Q92551 441 aa11.78□□□□□ -0.52
CCDC163-202ENST00000626177 TRPM3Q9HCF6 1732 aaPredicted RBP11.78□□□□□ -0.52
CCDC163-202ENST00000626177 LTN1O94822 1766 aa11.78□□□□□ -0.52
CCDC163-202ENST00000626177 SMC4Q9NTJ3 1288 aa11.78□□□□□ -0.52
CCDC163-202ENST00000626177 XIRP1Q702N8 1843 aaKnown RBP11.77□□□□□ -0.52
CCDC163-202ENST00000626177 KRT24Q2M2I5 525 aa11.77□□□□□ -0.53
CCDC163-202ENST00000626177 NBPF6Q5VWK0 638 aa11.77□□□□□ -0.53
CCDC163-202ENST00000626177 C8orf58Q8NAV2 365 aa11.77□□□□□ -0.53
CCDC163-202ENST00000626177 LRRC59Q96AG4 307 aaKnown RBP11.77□□□□□ -0.53
CCDC163-202ENST00000626177 NBPF4Q96M43 638 aa11.77□□□□□ -0.53
CCDC163-202ENST00000626177 IFT57Q9NWB7 429 aa11.77□□□□□ -0.53
CCDC163-202ENST00000626177 MIS18AQ9NYP9 233 aa11.77□□□□□ -0.53
CCDC163-202ENST00000626177 KDRP35968 1356 aa11.77□□□□□ -0.53
CCDC163-202ENST00000626177 PDE3AQ14432 1141 aa11.76□□□□□ -0.53
CCDC163-202ENST00000626177 CABLES1Q8TDN4 633 aa11.76□□□□□ -0.53
CCDC163-202ENST00000626177 AXIN2Q9Y2T1 843 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms