RNA–Protein interactions for RNA: ENST00000626061.2

SNAP23-222, Transcript of synaptosome associated protein 23, human

TSL 5 BASIC

Gene SNAP23, Length 237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNAP23-222	ENST00000626061	PRDM11	Q9NQV5	511 aa		10.54	□□□□□ -0.72
SNAP23-222	ENST00000626061	IGSF1	Q8N6C5	1336 aa		10.54	□□□□□ -0.72
SNAP23-222	ENST00000626061	TNRC6C	Q9HCJ0	1690 aa	Known RBP	10.53	□□□□□ -0.72
SNAP23-222	ENST00000626061	ATP7B	P35670	1465 aa		10.53	□□□□□ -0.72
SNAP23-222	ENST00000626061	NUTM2F	A1L443	756 aa		10.52	□□□□□ -0.73
SNAP23-222	ENST00000626061	TCP11L2	Q8N4U5	519 aa		10.52	□□□□□ -0.73
SNAP23-222	ENST00000626061	RNF39	Q9H2S5	420 aa		10.52	□□□□□ -0.73
SNAP23-222	ENST00000626061	SBNO1	A3KN83	1393 aa		10.52	□□□□□ -0.73
SNAP23-222	ENST00000626061	PARP4	Q9UKK3	1724 aa	Known RBP	10.51	□□□□□ -0.73
SNAP23-222	ENST00000626061	ROBO2	Q9HCK4	1378 aa		10.51	□□□□□ -0.73
SNAP23-222	ENST00000626061	ADAMTS7	Q9UKP4	1686 aa		10.5	□□□□□ -0.73
SNAP23-222	ENST00000626061	VEGFB	P49765	207 aa		10.5	□□□□□ -0.73
SNAP23-222	ENST00000626061	ZNF219	Q9P2Y4	722 aa	Predicted RBP	10.5	□□□□□ -0.73
SNAP23-222	ENST00000626061	PNPLA7	Q6ZV29	1317 aa		10.5	□□□□□ -0.73
SNAP23-222	ENST00000626061	PHRF1	Q9P1Y6	1649 aa	Known RBP	10.5	□□□□□ -0.73
SNAP23-222	ENST00000626061	MAP2K1	Q02750	393 aa	Predicted RBP	10.49	□□□□□ -0.73
SNAP23-222	ENST00000626061	CSRNP3	Q8WYN3	585 aa		10.49	□□□□□ -0.73
SNAP23-222	ENST00000626061	QSER1	Q2KHR3	1735 aa		10.49	□□□□□ -0.73
SNAP23-222	ENST00000626061	CASKIN1	Q8WXD9	1431 aa		10.49	□□□□□ -0.73
SNAP23-222	ENST00000626061	HFM1	A2PYH4	1435 aa		10.48	□□□□□ -0.73
SNAP23-222	ENST00000626061	EVA1C	P58658	441 aa		10.47	□□□□□ -0.73
SNAP23-222	ENST00000626061	SSH2	Q76I76	1423 aa		10.47	□□□□□ -0.73
SNAP23-222	ENST00000626061	DGKZ	Q13574	1117 aa		10.46	□□□□□ -0.73
SNAP23-222	ENST00000626061	THRAP3	Q9Y2W1	955 aa	Known RBP	10.46	□□□□□ -0.73
SNAP23-222	ENST00000626061	BRD4	O60885	1362 aa	Predicted RBP	10.46	□□□□□ -0.74
SNAP23-222	ENST00000626061	VIRMA	Q69YN4	1812 aa	Known RBP	10.45	□□□□□ -0.74
SNAP23-222	ENST00000626061	ERBIN	Q96RT1	1412 aa		10.45	□□□□□ -0.74
SNAP23-222	ENST00000626061	C9orf131	Q5VYM1	1079 aa		10.45	□□□□□ -0.74
SNAP23-222	ENST00000626061	AKT1S1	Q96B36	256 aa		10.45	□□□□□ -0.74
SNAP23-222	ENST00000626061	BEGAIN	Q9BUH8	593 aa		10.45	□□□□□ -0.74
SNAP23-222	ENST00000626061	TFCP2L1	Q9NZI6	479 aa		10.45	□□□□□ -0.74
SNAP23-222	ENST00000626061		A0A0C4DFX4	3053 aa		10.45	□□□□□ -0.74
SNAP23-222	ENST00000626061	MEGF6	O75095	1541 aa		10.43	□□□□□ -0.74
SNAP23-222	ENST00000626061	BCL9	O00512	1426 aa		10.43	□□□□□ -0.74
SNAP23-222	ENST00000626061	CHRNA2	Q15822	529 aa		10.43	□□□□□ -0.74
SNAP23-222	ENST00000626061	DDB1	Q16531	1140 aa		10.43	□□□□□ -0.74
SNAP23-222	ENST00000626061	MSL1	Q68DK7	614 aa		10.43	□□□□□ -0.74
SNAP23-222	ENST00000626061	ARHGAP27	Q6ZUM4	889 aa		10.43	□□□□□ -0.74
SNAP23-222	ENST00000626061	SNX27	Q96L92	541 aa		10.43	□□□□□ -0.74
SNAP23-222	ENST00000626061	PKD1L3	Q7Z443	1732 aa		10.43	□□□□□ -0.74
SNAP23-222	ENST00000626061	LRRC37A3	O60309	1634 aa		10.42	□□□□□ -0.74
SNAP23-222	ENST00000626061	NAIP	Q13075	1403 aa		10.41	□□□□□ -0.74
SNAP23-222	ENST00000626061	KIAA0232	Q92628	1395 aa		10.41	□□□□□ -0.74
SNAP23-222	ENST00000626061	VEGFA	P15692	232 aa	Predicted RBP	10.41	□□□□□ -0.74
SNAP23-222	ENST00000626061	LARP1	Q6PKG0	1096 aa	Known RBP	10.41	□□□□□ -0.74
SNAP23-222	ENST00000626061	PHF8	Q9UPP1	1060 aa		10.39	□□□□□ -0.75
SNAP23-222	ENST00000626061	TUBGCP6	Q96RT7	1819 aa		10.38	□□□□□ -0.75
SNAP23-222	ENST00000626061	IQGAP3	Q86VI3	1631 aa		10.38	□□□□□ -0.75
SNAP23-222	ENST00000626061	COL25A1	Q9BXS0	654 aa	Predicted RBP	10.38	□□□□□ -0.75
SNAP23-222	ENST00000626061	PRDM6	Q9NQX0	595 aa		10.38	□□□□□ -0.75
SNAP23-222	ENST00000626061	LRRC4B	Q9NT99	713 aa		10.38	□□□□□ -0.75
SNAP23-222	ENST00000626061	FMN2	Q9NZ56	1722 aa		10.38	□□□□□ -0.75
SNAP23-222	ENST00000626061	PLA2G5	P39877	138 aa		10.37	□□□□□ -0.75
SNAP23-222	ENST00000626061	MARCH10	Q8NA82	808 aa	Predicted RBP	10.37	□□□□□ -0.75
SNAP23-222	ENST00000626061	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.37	□□□□□ -0.75
SNAP23-222	ENST00000626061	TSKS	Q9UJT2	592 aa		10.37	□□□□□ -0.75
SNAP23-222	ENST00000626061	BCS1L	Q9Y276	419 aa		10.37	□□□□□ -0.75
SNAP23-222	ENST00000626061	COL9A1	P20849	921 aa		10.36	□□□□□ -0.75
SNAP23-222	ENST00000626061	RNF181	Q9P0P0	153 aa		10.36	□□□□□ -0.75
SNAP23-222	ENST00000626061	AKAP12	Q02952	1782 aa		10.36	□□□□□ -0.75
SNAP23-222	ENST00000626061	NRXN1	Q9ULB1	1477 aa		10.36	□□□□□ -0.75
SNAP23-222	ENST00000626061	FAM122A	Q96E09	287 aa		10.35	□□□□□ -0.75
SNAP23-222	ENST00000626061	WDR33	Q9C0J8	1336 aa	Known RBP	10.34	□□□□□ -0.75
SNAP23-222	ENST00000626061	CRYBG1	Q9Y4K1	1723 aa		10.33	□□□□□ -0.76
SNAP23-222	ENST00000626061	TMEM88B	A6NKF7	163 aa		10.33	□□□□□ -0.76
SNAP23-222	ENST00000626061	PIK3C2A	O00443	1686 aa		10.32	□□□□□ -0.76
SNAP23-222	ENST00000626061	CHADL	Q6NUI6	762 aa		10.32	□□□□□ -0.76
SNAP23-222	ENST00000626061	NHS	Q6T4R5	1651 aa		10.31	□□□□□ -0.76
SNAP23-222	ENST00000626061	ALS2	Q96Q42	1657 aa		10.31	□□□□□ -0.76
SNAP23-222	ENST00000626061	ANKRD30B	Q9BXX2	1392 aa		10.31	□□□□□ -0.76
SNAP23-222	ENST00000626061	ZC3H6	P61129	1189 aa	Known RBP	10.31	□□□□□ -0.76
SNAP23-222	ENST00000626061	C1QBP	Q07021	282 aa	Known RBP	10.31	□□□□□ -0.76
SNAP23-222	ENST00000626061	DEFB115	Q30KQ5	88 aa		10.31	□□□□□ -0.76
SNAP23-222	ENST00000626061	SLC27A3	Q5K4L6	730 aa		10.31	□□□□□ -0.76
SNAP23-222	ENST00000626061	COL23A1	Q86Y22	540 aa	Predicted RBP	10.31	□□□□□ -0.76
SNAP23-222	ENST00000626061	TRPM1	Q7Z4N2	1603 aa		10.31	□□□□□ -0.76
SNAP23-222	ENST00000626061	CASP8AP2	Q9UKL3	1982 aa		10.31	□□□□□ -0.76
SNAP23-222	ENST00000626061	SPATA31E1	Q6ZUB1	1445 aa		10.31	□□□□□ -0.76
SNAP23-222	ENST00000626061	RASSF10	A6NK89	507 aa		10.3	□□□□□ -0.76
SNAP23-222	ENST00000626061	ZNF326	Q5BKZ1	582 aa	Known RBP	10.3	□□□□□ -0.76
SNAP23-222	ENST00000626061	CEP162	Q5TB80	1403 aa		10.3	□□□□□ -0.76
SNAP23-222	ENST00000626061	TRPM3	Q9HCF6	1732 aa	Predicted RBP	10.3	□□□□□ -0.76
SNAP23-222	ENST00000626061	RRP7BP	Q9NSQ0	103 aa		10.29	□□□□□ -0.76
SNAP23-222	ENST00000626061	LTBP1	Q14766	1721 aa		10.29	□□□□□ -0.76
SNAP23-222	ENST00000626061	ZC3H4	Q9UPT8	1303 aa	Known RBP	10.29	□□□□□ -0.76
SNAP23-222	ENST00000626061	SZT2	Q5T011	3432 aa		10.29	□□□□□ -0.76
SNAP23-222	ENST00000626061	CRB1	P82279	1406 aa		10.28	□□□□□ -0.76
SNAP23-222	ENST00000626061	GLTPD2	A6NH11	291 aa		10.28	□□□□□ -0.76
SNAP23-222	ENST00000626061	FCHSD2	O94868	740 aa		10.28	□□□□□ -0.76
SNAP23-222	ENST00000626061	SLC4A2	P04920	1241 aa		10.28	□□□□□ -0.76
SNAP23-222	ENST00000626061	ACSBG1	Q96GR2	724 aa		10.28	□□□□□ -0.76
SNAP23-222	ENST00000626061	COLQ	Q9Y215	455 aa	Predicted RBP	10.28	□□□□□ -0.76
SNAP23-222	ENST00000626061	TRIOBP	Q9H2D6	2365 aa		10.28	□□□□□ -0.76
SNAP23-222	ENST00000626061	THSD7B	Q9C0I4	1608 aa		10.27	□□□□□ -0.77
SNAP23-222	ENST00000626061	CA12	O43570	354 aa		10.27	□□□□□ -0.77
SNAP23-222	ENST00000626061	SLC4A1AP	Q9BWU0	796 aa	Known RBP	10.27	□□□□□ -0.77
SNAP23-222	ENST00000626061	PASK	Q96RG2	1323 aa		10.27	□□□□□ -0.77
SNAP23-222	ENST00000626061	PRR36	Q9H6K5	1346 aa		10.27	□□□□□ -0.77
SNAP23-222	ENST00000626061	CLTCL1	P53675	1640 aa		10.26	□□□□□ -0.77
SNAP23-222	ENST00000626061	BTAF1	O14981	1849 aa		10.26	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms