RNA–Protein interactions for RNA: ENST00000625410.1

LINC01943-201, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 2 BASIC

Gene LINC01943, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-201ENST00000625410 ESCO1Q5FWF5 840 aa13.04□□□□□ -0.32
LINC01943-201ENST00000625410 ALS2Q96Q42 1657 aa13.03□□□□□ -0.32
LINC01943-201ENST00000625410 PPM1GO15355 546 aaPredicted RBP13.03□□□□□ -0.32
LINC01943-201ENST00000625410 TRIM35Q9UPQ4 493 aa13.03□□□□□ -0.32
LINC01943-201ENST00000625410 SBNO1A3KN83 1393 aa13.03□□□□□ -0.32
LINC01943-201ENST00000625410 TMPOP42166 694 aaKnown RBP13.02□□□□□ -0.33
LINC01943-201ENST00000625410 MYT1Q01538 1121 aa13.02□□□□□ -0.33
LINC01943-201ENST00000625410 HSP90AB2PQ58FF8 381 aa13.02□□□□□ -0.33
LINC01943-201ENST00000625410 NUTM2GQ5VZR2 741 aa13.02□□□□□ -0.33
LINC01943-201ENST00000625410 C14orf37Q86TY3 774 aa13.02□□□□□ -0.33
LINC01943-201ENST00000625410 PHRF1Q9P1Y6 1649 aaKnown RBP13.02□□□□□ -0.33
LINC01943-201ENST00000625410 FCHSD2O94868 740 aa13.01□□□□□ -0.33
LINC01943-201ENST00000625410 NLRP6P59044 892 aa13.01□□□□□ -0.33
LINC01943-201ENST00000625410 PHACTR3Q96KR7 559 aa13.01□□□□□ -0.33
LINC01943-201ENST00000625410 SLAIN2Q9P270 581 aa13.01□□□□□ -0.33
LINC01943-201ENST00000625410 RCAN3Q9UKA8 241 aa13.01□□□□□ -0.33
LINC01943-201ENST00000625410 USP19O94966 1318 aa13.01□□□□□ -0.33
LINC01943-201ENST00000625410 MSH6P52701 1360 aa13.01□□□□□ -0.33
LINC01943-201ENST00000625410 PXDNQ92626 1479 aa13□□□□□ -0.33
LINC01943-201ENST00000625410 FLT4P35916 1363 aa13□□□□□ -0.33
LINC01943-201ENST00000625410 FOXO3O43524 673 aa13□□□□□ -0.33
LINC01943-201ENST00000625410 HMOX1P09601 288 aa13□□□□□ -0.33
LINC01943-201ENST00000625410 PRKAR2BP31323 418 aa13□□□□□ -0.33
LINC01943-201ENST00000625410 RRP1P56182 461 aaKnown RBP13□□□□□ -0.33
LINC01943-201ENST00000625410 AEBP1Q8IUX7 1158 aa13□□□□□ -0.33
LINC01943-201ENST00000625410 KIF24Q5T7B8 1368 aa12.99□□□□□ -0.33
LINC01943-201ENST00000625410 E9PSI1 815 aa12.99□□□□□ -0.33
LINC01943-201ENST00000625410 SOX12O15370 315 aa12.99□□□□□ -0.33
LINC01943-201ENST00000625410 NEFLP07196 543 aa12.99□□□□□ -0.33
LINC01943-201ENST00000625410 XPCQ01831 940 aaPredicted RBP12.99□□□□□ -0.33
LINC01943-201ENST00000625410 NEUROD2Q15784 382 aa12.99□□□□□ -0.33
LINC01943-201ENST00000625410 WDR63Q8IWG1 891 aa12.99□□□□□ -0.33
LINC01943-201ENST00000625410 ABTB2Q8N961 1025 aa12.99□□□□□ -0.33
LINC01943-201ENST00000625410 CRYBG1Q9Y4K1 1723 aa12.99□□□□□ -0.33
LINC01943-201ENST00000625410 ARHGEF10O15013 1369 aa12.98□□□□□ -0.33
LINC01943-201ENST00000625410 JCADQ9P266 1359 aa12.98□□□□□ -0.33
LINC01943-201ENST00000625410 LTN1O94822 1766 aa12.97□□□□□ -0.33
LINC01943-201ENST00000625410 RTL1A6NKG5 1358 aa12.97□□□□□ -0.33
LINC01943-201ENST00000625410 KDRP35968 1356 aa12.97□□□□□ -0.33
LINC01943-201ENST00000625410 IGSF1Q8N6C5 1336 aa12.97□□□□□ -0.33
LINC01943-201ENST00000625410 HOXC9P31274 260 aa12.97□□□□□ -0.33
LINC01943-201ENST00000625410 KRT28Q7Z3Y7 464 aa12.97□□□□□ -0.33
LINC01943-201ENST00000625410 PELP1Q8IZL8 1130 aaKnown RBP12.97□□□□□ -0.33
LINC01943-201ENST00000625410 DDX17Q92841 729 aaKnown RBP12.97□□□□□ -0.33
LINC01943-201ENST00000625410 PAK3O75914 559 aaPredicted RBP12.96□□□□□ -0.33
LINC01943-201ENST00000625410 ATF3P18847 181 aa12.96□□□□□ -0.33
LINC01943-201ENST00000625410 PSME1Q06323 249 aa12.96□□□□□ -0.33
LINC01943-201ENST00000625410 NFE2L2Q16236 605 aa12.96□□□□□ -0.33
LINC01943-201ENST00000625410 ERICH6BQ5W0A0 696 aa12.96□□□□□ -0.33
LINC01943-201ENST00000625410 PHLPP1O60346 1717 aa12.96□□□□□ -0.34
LINC01943-201ENST00000625410 CADPS2Q86UW7 1296 aa12.95□□□□□ -0.34
LINC01943-201ENST00000625410 COL16A1Q07092 1604 aaPredicted RBP12.95□□□□□ -0.34
LINC01943-201ENST00000625410 IL16Q14005 1332 aa12.94□□□□□ -0.34
LINC01943-201ENST00000625410 MAPK8IP3Q9UPT6 1336 aa12.94□□□□□ -0.34
LINC01943-201ENST00000625410 DLG5Q8TDM6 1919 aa12.94□□□□□ -0.34
LINC01943-201ENST00000625410 CAMTA1Q9Y6Y1 1673 aa12.94□□□□□ -0.34
LINC01943-201ENST00000625410 MAPK8IP2Q13387 824 aaPredicted RBP12.94□□□□□ -0.34
LINC01943-201ENST00000625410 BRINP3Q76B58 766 aa12.94□□□□□ -0.34
LINC01943-201ENST00000625410 EYA1Q99502 592 aa12.94□□□□□ -0.34
LINC01943-201ENST00000625410 NCAPD2Q15021 1401 aa12.94□□□□□ -0.34
LINC01943-201ENST00000625410 SPATA31A6Q5VVP1 1343 aa12.93□□□□□ -0.34
LINC01943-201ENST00000625410 RIPK4P57078 832 aa12.93□□□□□ -0.34
LINC01943-201ENST00000625410 SULT6B1Q6IMI4 303 aa12.93□□□□□ -0.34
LINC01943-201ENST00000625410 TNS3Q68CZ2 1445 aa12.93□□□□□ -0.34
LINC01943-201ENST00000625410 FANCIQ9NVI1 1328 aa12.92□□□□□ -0.34
LINC01943-201ENST00000625410 PLIN1O60240 522 aa12.92□□□□□ -0.34
LINC01943-201ENST00000625410 AMPHP49418 695 aa12.92□□□□□ -0.34
LINC01943-201ENST00000625410 ARHGEF25Q86VW2 580 aa12.92□□□□□ -0.34
LINC01943-201ENST00000625410 IP6K1Q92551 441 aa12.92□□□□□ -0.34
LINC01943-201ENST00000625410 PNNQ9H307 717 aaKnown RBP12.92□□□□□ -0.34
LINC01943-201ENST00000625410 LMO7Q8WWI1 1683 aa12.92□□□□□ -0.34
LINC01943-201ENST00000625410 COL18A1P39060 1754 aa12.92□□□□□ -0.34
LINC01943-201ENST00000625410 LRP6O75581 1613 aa12.91□□□□□ -0.34
LINC01943-201ENST00000625410 GCP02774 474 aa12.91□□□□□ -0.34
LINC01943-201ENST00000625410 ZNF853P0CG23 659 aa12.91□□□□□ -0.34
LINC01943-201ENST00000625410 C20orf194Q5TEA3 1177 aa12.91□□□□□ -0.34
LINC01943-201ENST00000625410 THUMPD2Q9BTF0 503 aaKnown RBP12.91□□□□□ -0.34
LINC01943-201ENST00000625410 NHSL1Q5SYE7 1610 aa12.91□□□□□ -0.34
LINC01943-201ENST00000625410 TSR2Q969E8 191 aaKnown RBP12.9□□□□□ -0.34
LINC01943-201ENST00000625410 PPP4R2Q9NY27 417 aa12.9□□□□□ -0.34
LINC01943-201ENST00000625410 LRRC37A3O60309 1634 aa12.9□□□□□ -0.34
LINC01943-201ENST00000625410 AHDC1Q5TGY3 1603 aaPredicted RBP12.9□□□□□ -0.34
LINC01943-201ENST00000625410 SPATA31A3Q5VYP0 1347 aa12.89□□□□□ -0.35
LINC01943-201ENST00000625410 NPHP3Q7Z494 1330 aa12.89□□□□□ -0.35
LINC01943-201ENST00000625410 RGPD2P0DJD1 1756 aa12.89□□□□□ -0.35
LINC01943-201ENST00000625410 BCAR3O75815 825 aa12.89□□□□□ -0.35
LINC01943-201ENST00000625410 ZNF772Q68DY9 489 aaPredicted RBP12.89□□□□□ -0.35
LINC01943-201ENST00000625410 KCNH5Q8NCM2 988 aa12.89□□□□□ -0.35
LINC01943-201ENST00000625410 EXOC6Q8TAG9 804 aa12.89□□□□□ -0.35
LINC01943-201ENST00000625410 SOS2Q07890 1332 aaPredicted RBP12.88□□□□□ -0.35
LINC01943-201ENST00000625410 FAM83GA6ND36 823 aa12.88□□□□□ -0.35
LINC01943-201ENST00000625410 RARSP54136 660 aaKnown RBP12.88□□□□□ -0.35
LINC01943-201ENST00000625410 ABCA3Q99758 1704 aa12.88□□□□□ -0.35
LINC01943-201ENST00000625410 CRB1P82279 1406 aa12.88□□□□□ -0.35
LINC01943-201ENST00000625410 UPF1Q92900 1129 aaKnown RBP eCLIP12.87□□□□□ -0.35
LINC01943-201ENST00000625410 AXIN2Q9Y2T1 843 aa12.87□□□□□ -0.35
LINC01943-201ENST00000625410 EXOSC9Q06265 439 aaKnown RBP12.86□□□□□ -0.35
LINC01943-201ENST00000625410 DCTN1Q14203 1278 aa12.86□□□□□ -0.35
LINC01943-201ENST00000625410 MTHFSDQ2M296 383 aaKnown RBP12.86□□□□□ -0.35
LINC01943-201ENST00000625410 NBPF6Q5VWK0 638 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms