RNA–Protein interactions for RNA: ENST00000625222.1

LINC01230-201, Transcript of long intergenic non-protein coding RNA 1230, humanhuman

BASIC

Gene LINC01230, Length 3,017 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01230-201ENST00000625222 CYB5RLQ6IPT4 315 aa18.49■□□□□ 0.55
LINC01230-201ENST00000625222 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
LINC01230-201ENST00000625222 NCBP3Q53F19 620 aaKnown RBP18.49■□□□□ 0.55
LINC01230-201ENST00000625222 BMP2KLQ5H9B9 411 aa18.49■□□□□ 0.55
LINC01230-201ENST00000625222 ZNF692Q9BU19 519 aaPredicted RBP18.49■□□□□ 0.55
LINC01230-201ENST00000625222 SMARCA5O60264 1052 aaPredicted RBP18.48■□□□□ 0.55
LINC01230-201ENST00000625222 NAP1L5Q96NT1 182 aaPredicted RBP18.48■□□□□ 0.55
LINC01230-201ENST00000625222 DDX11L8A8MPP1 907 aa18.48■□□□□ 0.55
LINC01230-201ENST00000625222 RBM25P49756 843 aaKnown RBP18.48■□□□□ 0.55
LINC01230-201ENST00000625222 OTUD7AQ8TE49 926 aaPredicted RBP18.48■□□□□ 0.55
LINC01230-201ENST00000625222 COG3Q96JB2 828 aa18.48■□□□□ 0.55
LINC01230-201ENST00000625222 SSFA2P28290 1259 aa18.47■□□□□ 0.55
LINC01230-201ENST00000625222 MIS18AQ9NYP9 233 aa18.47■□□□□ 0.55
LINC01230-201ENST00000625222 MCM10Q7L590 875 aa18.47■□□□□ 0.55
LINC01230-201ENST00000625222 GCC1Q96CN9 775 aa18.47■□□□□ 0.55
LINC01230-201ENST00000625222 NCLP19338 710 aaKnown RBP18.47■□□□□ 0.55
LINC01230-201ENST00000625222 IL13P35225 146 aa18.47■□□□□ 0.55
LINC01230-201ENST00000625222 GAS2L2Q8NHY3 880 aa18.46■□□□□ 0.55
LINC01230-201ENST00000625222 KIF2CQ99661 725 aa18.46■□□□□ 0.55
LINC01230-201ENST00000625222 DIP2CQ9Y2E4 1556 aa18.46■□□□□ 0.55
LINC01230-201ENST00000625222 CALD1Q05682 793 aaKnown RBP18.45■□□□□ 0.54
LINC01230-201ENST00000625222 SULT6B1Q6IMI4 303 aa18.45■□□□□ 0.54
LINC01230-201ENST00000625222 GRPEL1Q9HAV7 217 aa18.45■□□□□ 0.54
LINC01230-201ENST00000625222 IFT57Q9NWB7 429 aa18.45■□□□□ 0.54
LINC01230-201ENST00000625222 FAM135BQ49AJ0 1406 aa18.45■□□□□ 0.54
LINC01230-201ENST00000625222 PNPLA6Q8IY17 1366 aa18.45■□□□□ 0.54
LINC01230-201ENST00000625222 FSD2A1L4K1 749 aa18.44■□□□□ 0.54
LINC01230-201ENST00000625222 GBP4Q96PP9 640 aa18.44■□□□□ 0.54
LINC01230-201ENST00000625222 SLC4A10Q6U841 1118 aa18.44■□□□□ 0.54
LINC01230-201ENST00000625222 NUDT16Q96DE0 195 aaKnown RBP18.44■□□□□ 0.54
LINC01230-201ENST00000625222 GSPT1P15170 499 aaKnown RBP18.44■□□□□ 0.54
LINC01230-201ENST00000625222 K7ELQ4 463 aaPredicted RBP18.43■□□□□ 0.54
LINC01230-201ENST00000625222 CDC45O75419 566 aa18.43■□□□□ 0.54
LINC01230-201ENST00000625222 FOXD4L5Q5VV16 416 aaPredicted RBP18.43■□□□□ 0.54
LINC01230-201ENST00000625222 GAS2L3Q86XJ1 694 aa18.43■□□□□ 0.54
LINC01230-201ENST00000625222 FOXD4L4Q8WXT5 416 aaPredicted RBP18.43■□□□□ 0.54
LINC01230-201ENST00000625222 API5Q9BZZ5 524 aaKnown RBP18.42■□□□□ 0.54
LINC01230-201ENST00000625222 ZFYVE9O95405 1425 aa18.42■□□□□ 0.54
LINC01230-201ENST00000625222 WASLO00401 505 aaPredicted RBP18.42■□□□□ 0.54
LINC01230-201ENST00000625222 FAM69CQ0P6D2 419 aa18.42■□□□□ 0.54
LINC01230-201ENST00000625222 CFAP44Q96MT7 982 aa18.42■□□□□ 0.54
LINC01230-201ENST00000625222 MRE11P49959 708 aa18.41■□□□□ 0.54
LINC01230-201ENST00000625222 SNX21Q969T3 373 aa18.41■□□□□ 0.54
LINC01230-201ENST00000625222 CHMP4BQ9H444 224 aaKnown RBP18.41■□□□□ 0.54
LINC01230-201ENST00000625222 ALKQ9UM73 1620 aa18.41■□□□□ 0.54
LINC01230-201ENST00000625222 NECTIN2Q92692 538 aa18.41■□□□□ 0.54
LINC01230-201ENST00000625222 ARHGEF40Q8TER5 1519 aa18.41■□□□□ 0.54
LINC01230-201ENST00000625222 CFAP74Q9C0B2 1584 aa18.4■□□□□ 0.54
LINC01230-201ENST00000625222 PLEKHM2Q8IWE5 1019 aa18.4■□□□□ 0.54
LINC01230-201ENST00000625222 ABCC4O15439 1325 aa18.4■□□□□ 0.54
LINC01230-201ENST00000625222 RAB3GAP1Q15042 981 aa18.39■□□□□ 0.53
LINC01230-201ENST00000625222 TSHZ3Q63HK5 1081 aa18.39■□□□□ 0.53
LINC01230-201ENST00000625222 LMOD3Q0VAK6 560 aa18.39■□□□□ 0.53
LINC01230-201ENST00000625222 ARHGAP45Q92619 1136 aa18.39■□□□□ 0.53
LINC01230-201ENST00000625222 ARHGAP31Q2M1Z3 1444 aa18.38■□□□□ 0.53
LINC01230-201ENST00000625222 F6X3S4 739 aa18.38■□□□□ 0.53
LINC01230-201ENST00000625222 NOL8Q76FK4 1167 aaKnown RBP18.38■□□□□ 0.53
LINC01230-201ENST00000625222 ZNF428Q96B54 188 aa18.38■□□□□ 0.53
LINC01230-201ENST00000625222 TRIM44Q96DX7 344 aaPredicted RBP18.38■□□□□ 0.53
LINC01230-201ENST00000625222 MEIS3Q99687 375 aa18.38■□□□□ 0.53
LINC01230-201ENST00000625222 ZNF853P0CG23 659 aa18.38■□□□□ 0.53
LINC01230-201ENST00000625222 CHAMP1Q96JM3 812 aa18.38■□□□□ 0.53
LINC01230-201ENST00000625222 ESF1Q9H501 851 aaKnown RBP18.38■□□□□ 0.53
LINC01230-201ENST00000625222 DDX49Q9Y6V7 483 aaKnown RBP18.38■□□□□ 0.53
LINC01230-201ENST00000625222 TMEM131LA2VDJ0 1609 aa18.37■□□□□ 0.53
LINC01230-201ENST00000625222 MCTP1Q6DN14 999 aa18.37■□□□□ 0.53
LINC01230-201ENST00000625222 DDIT3P35638 169 aa18.36■□□□□ 0.53
LINC01230-201ENST00000625222 NEO1Q92859 1461 aa18.36■□□□□ 0.53
LINC01230-201ENST00000625222 RIMS2Q9UQ26 1411 aa18.36■□□□□ 0.53
LINC01230-201ENST00000625222 FOXO3O43524 673 aa18.36■□□□□ 0.53
LINC01230-201ENST00000625222 HSP90AB2PQ58FF8 381 aa18.36■□□□□ 0.53
LINC01230-201ENST00000625222 METP08581 1390 aa18.36■□□□□ 0.53
LINC01230-201ENST00000625222 MAP2P11137 1827 aaKnown RBP18.36■□□□□ 0.53
LINC01230-201ENST00000625222 PKP1Q13835 747 aa18.36■□□□□ 0.53
LINC01230-201ENST00000625222 EIF4A2Q14240 407 aaKnown RBP18.36■□□□□ 0.53
LINC01230-201ENST00000625222 MED14O60244 1454 aa18.35■□□□□ 0.53
LINC01230-201ENST00000625222 CCDC61Q9Y6R9 512 aa18.35■□□□□ 0.53
LINC01230-201ENST00000625222 SLC4A2P04920 1241 aa18.35■□□□□ 0.53
LINC01230-201ENST00000625222 TPRNQ4KMQ1 711 aa18.35■□□□□ 0.53
LINC01230-201ENST00000625222 TTC22Q5TAA0 569 aa18.35■□□□□ 0.53
LINC01230-201ENST00000625222 PTCH1Q13635 1447 aa18.35■□□□□ 0.53
LINC01230-201ENST00000625222 GOLGA6L22H0YM25 854 aa18.34■□□□□ 0.53
LINC01230-201ENST00000625222 PREX1Q8TCU6 1659 aa18.34■□□□□ 0.53
LINC01230-201ENST00000625222 CIZ1Q9ULV3 898 aaPredicted RBP18.33■□□□□ 0.53
LINC01230-201ENST00000625222 SDSP20132 328 aa18.33■□□□□ 0.52
LINC01230-201ENST00000625222 BRPF1P55201 1214 aaPredicted RBP18.33■□□□□ 0.52
LINC01230-201ENST00000625222 DCTPP1Q9H773 170 aa18.33■□□□□ 0.52
LINC01230-201ENST00000625222 MSH6P52701 1360 aa18.33■□□□□ 0.52
LINC01230-201ENST00000625222 NCOA3Q9Y6Q9 1424 aa18.32■□□□□ 0.52
LINC01230-201ENST00000625222 ERBB4Q15303 1308 aa18.32■□□□□ 0.52
LINC01230-201ENST00000625222 G2E3Q7L622 706 aa18.32■□□□□ 0.52
LINC01230-201ENST00000625222 KIF20BQ96Q89 1820 aa18.32■□□□□ 0.52
LINC01230-201ENST00000625222 FOXD4L6Q3SYB3 417 aaPredicted RBP18.32■□□□□ 0.52
LINC01230-201ENST00000625222 CEP85Q6P2H3 762 aa18.32■□□□□ 0.52
LINC01230-201ENST00000625222 FOXD4L3Q6VB84 417 aaPredicted RBP18.32■□□□□ 0.52
LINC01230-201ENST00000625222 ZGPATQ8N5A5 531 aaKnown RBP18.32■□□□□ 0.52
LINC01230-201ENST00000625222 PLEKHG5O94827 1062 aa18.31■□□□□ 0.52
LINC01230-201ENST00000625222 BAG4O95429 457 aaKnown RBP18.31■□□□□ 0.52
LINC01230-201ENST00000625222 EXOC6BQ9Y2D4 811 aa18.31■□□□□ 0.52
LINC01230-201ENST00000625222 AK9Q5TCS8 1911 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms