RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 ADAMTSL3P82987 1691 aa19.12■□□□□ 0.65
LINC00552-201ENST00000625151 TMEM2Q9UHN6 1383 aa19.12■□□□□ 0.65
LINC00552-201ENST00000625151 LTKP29376 864 aa19.12■□□□□ 0.65
LINC00552-201ENST00000625151 NFE2L2Q16236 605 aa19.12■□□□□ 0.65
LINC00552-201ENST00000625151 CHMP5Q9NZZ3 219 aa19.12■□□□□ 0.65
LINC00552-201ENST00000625151 DLG5Q8TDM6 1919 aa19.12■□□□□ 0.65
LINC00552-201ENST00000625151 DLC1Q96QB1 1528 aa19.11■□□□□ 0.65
LINC00552-201ENST00000625151 VAMP4O75379 141 aa19.11■□□□□ 0.65
LINC00552-201ENST00000625151 TSPYL6Q8N831 410 aa19.11■□□□□ 0.65
LINC00552-201ENST00000625151 ZBTB7BO15156 539 aaPredicted RBP19.11■□□□□ 0.65
LINC00552-201ENST00000625151 MRPL50Q8N5N7 158 aaKnown RBP19.11■□□□□ 0.65
LINC00552-201ENST00000625151 ZNF428Q96B54 188 aa19.11■□□□□ 0.65
LINC00552-201ENST00000625151 EMILIN1Q9Y6C2 1016 aa19.11■□□□□ 0.65
LINC00552-201ENST00000625151 HSCBQ8IWL3 235 aa19.1■□□□□ 0.65
LINC00552-201ENST00000625151 C1orf115Q9H7X2 142 aa19.1■□□□□ 0.65
LINC00552-201ENST00000625151 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.1■□□□□ 0.65
LINC00552-201ENST00000625151 NRXN3Q9Y4C0 1643 aa19.1■□□□□ 0.65
LINC00552-201ENST00000625151 PTCH1Q13635 1447 aa19.1■□□□□ 0.65
LINC00552-201ENST00000625151 RBM25P49756 843 aaKnown RBP19.1■□□□□ 0.65
LINC00552-201ENST00000625151 ZNF692Q9BU19 519 aaPredicted RBP19.09■□□□□ 0.65
LINC00552-201ENST00000625151 L1TD1Q5T7N2 865 aaKnown RBP19.09■□□□□ 0.65
LINC00552-201ENST00000625151 PIK3R4Q99570 1358 aa19.09■□□□□ 0.65
LINC00552-201ENST00000625151 FAM43AQ8N2R8 423 aa19.08■□□□□ 0.65
LINC00552-201ENST00000625151 NCOA3Q9Y6Q9 1424 aa19.08■□□□□ 0.65
LINC00552-201ENST00000625151 ELL2O00472 640 aaPredicted RBP19.07■□□□□ 0.64
LINC00552-201ENST00000625151 IL13P35225 146 aa19.07■□□□□ 0.64
LINC00552-201ENST00000625151 ANKRD45Q5TZF3 282 aa19.07■□□□□ 0.64
LINC00552-201ENST00000625151 MBIPQ9NS73 344 aa19.07■□□□□ 0.64
LINC00552-201ENST00000625151 BMP2KLQ5H9B9 411 aa19.07■□□□□ 0.64
LINC00552-201ENST00000625151 METP08581 1390 aa19.07■□□□□ 0.64
LINC00552-201ENST00000625151 NME9Q86XW9 330 aa19.06■□□□□ 0.64
LINC00552-201ENST00000625151 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.06■□□□□ 0.64
LINC00552-201ENST00000625151 ARHGAP45Q92619 1136 aa19.06■□□□□ 0.64
LINC00552-201ENST00000625151 IFT57Q9NWB7 429 aa19.06■□□□□ 0.64
LINC00552-201ENST00000625151 ZRANB1Q9UGI0 708 aa19.06■□□□□ 0.64
LINC00552-201ENST00000625151 CPSF1Q10570 1443 aaKnown RBP19.06■□□□□ 0.64
LINC00552-201ENST00000625151 ZNF853P0CG23 659 aa19.06■□□□□ 0.64
LINC00552-201ENST00000625151 GNAI1P63096 354 aa19.06■□□□□ 0.64
LINC00552-201ENST00000625151 ARXQ96QS3 562 aa19.06■□□□□ 0.64
LINC00552-201ENST00000625151 GZF1Q9H116 711 aaPredicted RBP19.06■□□□□ 0.64
LINC00552-201ENST00000625151 CDK12Q9NYV4 1490 aaPredicted RBP19.05■□□□□ 0.64
LINC00552-201ENST00000625151 GCC1Q96CN9 775 aa19.05■□□□□ 0.64
LINC00552-201ENST00000625151 EDC4Q6P2E9 1401 aaKnown RBP19.05■□□□□ 0.64
LINC00552-201ENST00000625151 ABCC4O15439 1325 aa19.05■□□□□ 0.64
LINC00552-201ENST00000625151 CALD1Q05682 793 aaKnown RBP19.05■□□□□ 0.64
LINC00552-201ENST00000625151 TXNDC2Q86VQ3 553 aa19.05■□□□□ 0.64
LINC00552-201ENST00000625151 SIRT2Q8IXJ6 389 aa19.05■□□□□ 0.64
LINC00552-201ENST00000625151 DDIT3P35638 169 aa19.04■□□□□ 0.64
LINC00552-201ENST00000625151 SNX21Q969T3 373 aa19.04■□□□□ 0.64
LINC00552-201ENST00000625151 FSD2A1L4K1 749 aa19.04■□□□□ 0.64
LINC00552-201ENST00000625151 TRAK2O60296 914 aa19.03■□□□□ 0.64
LINC00552-201ENST00000625151 GOLGA6L3A6NEY3 463 aa19.02■□□□□ 0.64
LINC00552-201ENST00000625151 XRCC6P12956 609 aaKnown RBP eCLIP19.02■□□□□ 0.64
LINC00552-201ENST00000625151 TWISTNBQ3B726 338 aaPredicted RBP19.02■□□□□ 0.64
LINC00552-201ENST00000625151 KIF2CQ99661 725 aa19.02■□□□□ 0.64
LINC00552-201ENST00000625151 EIF5BO60841 1220 aaKnown RBP19.02■□□□□ 0.64
LINC00552-201ENST00000625151 C8orf58Q8NAV2 365 aa19.02■□□□□ 0.64
LINC00552-201ENST00000625151 CHMP4BQ9H444 224 aaKnown RBP19.02■□□□□ 0.64
LINC00552-201ENST00000625151 KNDC1Q76NI1 1749 aa19.02■□□□□ 0.63
LINC00552-201ENST00000625151 CPS1P31327 1500 aa19.01■□□□□ 0.63
LINC00552-201ENST00000625151 WASLO00401 505 aaPredicted RBP19.01■□□□□ 0.63
LINC00552-201ENST00000625151 MON2Q7Z3U7 1717 aa19.01■□□□□ 0.63
LINC00552-201ENST00000625151 ADAMTS13Q76LX8 1427 aa19.01■□□□□ 0.63
LINC00552-201ENST00000625151 FAM83GA6ND36 823 aa19.01■□□□□ 0.63
LINC00552-201ENST00000625151 NCKAP5LQ9HCH0 1330 aa19.01■□□□□ 0.63
LINC00552-201ENST00000625151 RRS1Q15050 365 aaKnown RBP19■□□□□ 0.63
LINC00552-201ENST00000625151 TBC1D9Q6ZT07 1266 aa19■□□□□ 0.63
LINC00552-201ENST00000625151 CFAP44Q96MT7 982 aa19■□□□□ 0.63
LINC00552-201ENST00000625151 SLC26A8Q96RN1 970 aa19■□□□□ 0.63
LINC00552-201ENST00000625151 AATKQ6ZMQ8 1374 aa19■□□□□ 0.63
LINC00552-201ENST00000625151 ARHGAP23Q9P227 1491 aa19■□□□□ 0.63
LINC00552-201ENST00000625151 HDGFP51858 240 aaKnown RBP19■□□□□ 0.63
LINC00552-201ENST00000625151 SLIT1O75093 1534 aa19■□□□□ 0.63
LINC00552-201ENST00000625151 CEP170BQ9Y4F5 1589 aaPredicted RBP19■□□□□ 0.63
LINC00552-201ENST00000625151 THEMISQ8N1K5 641 aaPredicted RBP18.99■□□□□ 0.63
LINC00552-201ENST00000625151 CD2BP2O95400 341 aaKnown RBP18.98■□□□□ 0.63
LINC00552-201ENST00000625151 DCTN1Q14203 1278 aa18.98■□□□□ 0.63
LINC00552-201ENST00000625151 PANK2Q9BZ23 570 aa18.98■□□□□ 0.63
LINC00552-201ENST00000625151 RRAGDQ9NQL2 400 aaPredicted RBP18.98■□□□□ 0.63
LINC00552-201ENST00000625151 AKAP12Q02952 1782 aa18.98■□□□□ 0.63
LINC00552-201ENST00000625151 PLEKHG1Q9ULL1 1385 aa18.98■□□□□ 0.63
LINC00552-201ENST00000625151 DDX11L8A8MPP1 907 aa18.97■□□□□ 0.63
LINC00552-201ENST00000625151 HSP90AB1P08238 724 aaKnown RBP18.97■□□□□ 0.63
LINC00552-201ENST00000625151 LMOD3Q0VAK6 560 aa18.97■□□□□ 0.63
LINC00552-201ENST00000625151 COG3Q96JB2 828 aa18.97■□□□□ 0.63
LINC00552-201ENST00000625151 ITSN1Q15811 1721 aa18.96■□□□□ 0.63
LINC00552-201ENST00000625151 TNPO1Q92973 898 aaKnown RBP18.96■□□□□ 0.63
LINC00552-201ENST00000625151 NUDT16Q96DE0 195 aaKnown RBP18.96■□□□□ 0.63
LINC00552-201ENST00000625151 EID1Q9Y6B2 187 aa18.96■□□□□ 0.63
LINC00552-201ENST00000625151 API5Q9BZZ5 524 aaKnown RBP18.96■□□□□ 0.63
LINC00552-201ENST00000625151 RBM42Q9BTD8 480 aaKnown RBP18.95■□□□□ 0.62
LINC00552-201ENST00000625151 CIZ1Q9ULV3 898 aaPredicted RBP18.94■□□□□ 0.62
LINC00552-201ENST00000625151 GSPT1P15170 499 aaKnown RBP18.93■□□□□ 0.62
LINC00552-201ENST00000625151 RAB3GAP1Q15042 981 aa18.93■□□□□ 0.62
LINC00552-201ENST00000625151 FOXD4L1Q9NU39 408 aa18.93■□□□□ 0.62
LINC00552-201ENST00000625151 NRKQ7Z2Y5 1582 aa18.93■□□□□ 0.62
LINC00552-201ENST00000625151 PTPRUQ92729 1446 aa18.93■□□□□ 0.62
LINC00552-201ENST00000625151 CCDC61Q9Y6R9 512 aa18.92■□□□□ 0.62
LINC00552-201ENST00000625151 CDC45O75419 566 aa18.92■□□□□ 0.62
LINC00552-201ENST00000625151 K7ELQ4 463 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms