RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 ADAMTSL3P82987 1691 aa11.34□□□□□ -0.59
USB1-216ENST00000624720 FSD2A1L4K1 749 aa11.34□□□□□ -0.59
USB1-216ENST00000624720 CEP152O94986 1710 aa11.33□□□□□ -0.59
USB1-216ENST00000624720 UHRF1BP1Q6BDS2 1440 aa11.33□□□□□ -0.6
USB1-216ENST00000624720 CCER2I3L3R5 266 aa11.33□□□□□ -0.6
USB1-216ENST00000624720 MTA1Q13330 715 aa11.33□□□□□ -0.6
USB1-216ENST00000624720 MROH1Q8NDA8 1641 aa11.32□□□□□ -0.6
USB1-216ENST00000624720 IPO8O15397 1037 aaKnown RBP11.32□□□□□ -0.6
USB1-216ENST00000624720 RAD21O60216 631 aa11.32□□□□□ -0.6
USB1-216ENST00000624720 MINK1Q8N4C8 1332 aaPredicted RBP11.32□□□□□ -0.6
USB1-216ENST00000624720 MPHOSPH10O00566 681 aaKnown RBP11.32□□□□□ -0.6
USB1-216ENST00000624720 ZNF853P0CG23 659 aa11.32□□□□□ -0.6
USB1-216ENST00000624720 DIP2CQ9Y2E4 1556 aa11.32□□□□□ -0.6
USB1-216ENST00000624720 PIK3R5Q8WYR1 880 aa11.31□□□□□ -0.6
USB1-216ENST00000624720 KDM4FA0A1W2PPD8 638 aa11.31□□□□□ -0.6
USB1-216ENST00000624720 PTPRTO14522 1441 aa11.31□□□□□ -0.6
USB1-216ENST00000624720 PDE4AP27815 886 aa11.31□□□□□ -0.6
USB1-216ENST00000624720 TDO2P48775 406 aa11.31□□□□□ -0.6
USB1-216ENST00000624720 ANKRD23Q86SG2 305 aa11.31□□□□□ -0.6
USB1-216ENST00000624720 CABP2Q9NPB3 220 aa11.31□□□□□ -0.6
USB1-216ENST00000624720 KIF16BQ96L93 1317 aa11.3□□□□□ -0.6
USB1-216ENST00000624720 MRE11P49959 708 aa11.3□□□□□ -0.6
USB1-216ENST00000624720 ITFG2Q969R8 447 aa11.3□□□□□ -0.6
USB1-216ENST00000624720 SLC12A5Q9H2X9 1139 aa11.3□□□□□ -0.6
USB1-216ENST00000624720 DONSONQ9NYP3 566 aa11.3□□□□□ -0.6
USB1-216ENST00000624720 FOXD4L5Q5VV16 416 aaPredicted RBP11.3□□□□□ -0.6
USB1-216ENST00000624720 SPTY2D1Q68D10 685 aaPredicted RBP11.3□□□□□ -0.6
USB1-216ENST00000624720 FOXD4L4Q8WXT5 416 aaPredicted RBP11.3□□□□□ -0.6
USB1-216ENST00000624720 WAPLQ7Z5K2 1190 aa11.29□□□□□ -0.6
USB1-216ENST00000624720 ABCC3O15438 1527 aa11.29□□□□□ -0.6
USB1-216ENST00000624720 TRPM2O94759 1503 aa11.29□□□□□ -0.6
USB1-216ENST00000624720 ZBED9Q6R2W3 1325 aa11.29□□□□□ -0.6
USB1-216ENST00000624720 SLC4A3P48751 1232 aa11.29□□□□□ -0.6
USB1-216ENST00000624720 TSPAN18Q96SJ8 248 aa11.29□□□□□ -0.6
USB1-216ENST00000624720 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.29□□□□□ -0.6
USB1-216ENST00000624720 KNSTRNQ9Y448 316 aa11.29□□□□□ -0.6
USB1-216ENST00000624720 EFCAB6Q5THR3 1501 aa11.29□□□□□ -0.6
USB1-216ENST00000624720 SRPK2P78362 688 aaKnown RBP11.28□□□□□ -0.6
USB1-216ENST00000624720 BACH2Q9BYV9 841 aa11.28□□□□□ -0.6
USB1-216ENST00000624720 NRDCO43847 1150 aa11.28□□□□□ -0.6
USB1-216ENST00000624720 HDAC1Q13547 482 aaPredicted RBP11.28□□□□□ -0.6
USB1-216ENST00000624720 RBM33Q96EV2 1170 aaKnown RBP11.28□□□□□ -0.6
USB1-216ENST00000624720 MTMR7Q9Y216 660 aa11.28□□□□□ -0.6
USB1-216ENST00000624720 AGLP35573 1532 aa11.28□□□□□ -0.6
USB1-216ENST00000624720 SLC26A8Q96RN1 970 aa11.27□□□□□ -0.6
USB1-216ENST00000624720 PRAM1Q96QH2 718 aa11.27□□□□□ -0.61
USB1-216ENST00000624720 TET3O43151 1660 aa11.26□□□□□ -0.61
USB1-216ENST00000624720 KIF1CO43896 1103 aaKnown RBP11.26□□□□□ -0.61
USB1-216ENST00000624720 MFAP1P55081 439 aaKnown RBP11.26□□□□□ -0.61
USB1-216ENST00000624720 ARHGEF1Q92888 912 aaKnown RBP11.26□□□□□ -0.61
USB1-216ENST00000624720 TNNT1P13805 278 aa11.26□□□□□ -0.61
USB1-216ENST00000624720 MYBPC2Q14324 1141 aa11.26□□□□□ -0.61
USB1-216ENST00000624720 DNAJC21Q5F1R6 531 aaKnown RBP11.26□□□□□ -0.61
USB1-216ENST00000624720 CALCOCO1Q9P1Z2 691 aa11.26□□□□□ -0.61
USB1-216ENST00000624720 SPHKAPQ2M3C7 1700 aa11.26□□□□□ -0.61
USB1-216ENST00000624720 ZC3H12AQ5D1E8 599 aaKnown RBP11.26□□□□□ -0.61
USB1-216ENST00000624720 CTR9Q6PD62 1173 aa11.26□□□□□ -0.61
USB1-216ENST00000624720 KCTD17Q8N5Z5 321 aa11.26□□□□□ -0.61
USB1-216ENST00000624720 TXNDC2Q86VQ3 553 aa11.25□□□□□ -0.61
USB1-216ENST00000624720 PAIP2Q9BPZ3 127 aaKnown RBP11.25□□□□□ -0.61
USB1-216ENST00000624720 RNF17Q9BXT8 1623 aaKnown RBP11.25□□□□□ -0.61
USB1-216ENST00000624720 ZMYM3Q14202 1370 aa11.25□□□□□ -0.61
USB1-216ENST00000624720 CALRP27797 417 aaKnown RBP11.25□□□□□ -0.61
USB1-216ENST00000624720 ATP2B3Q16720 1220 aa11.25□□□□□ -0.61
USB1-216ENST00000624720 ZSCAN30Q86W11 494 aa11.25□□□□□ -0.61
USB1-216ENST00000624720 C14orf93Q9H972 538 aaKnown RBP11.25□□□□□ -0.61
USB1-216ENST00000624720 FEZ2Q9UHY8 353 aaPredicted RBP11.24□□□□□ -0.61
USB1-216ENST00000624720 DEPDC5O75140 1603 aa11.24□□□□□ -0.61
USB1-216ENST00000624720 SCP2P22307 547 aa11.24□□□□□ -0.61
USB1-216ENST00000624720 MSNP26038 577 aaKnown RBP11.24□□□□□ -0.61
USB1-216ENST00000624720 BIRC2Q13490 618 aa11.24□□□□□ -0.61
USB1-216ENST00000624720 NCKAP5LQ9HCH0 1330 aa11.24□□□□□ -0.61
USB1-216ENST00000624720 TRPM1Q7Z4N2 1603 aa11.24□□□□□ -0.61
USB1-216ENST00000624720 PER1O15534 1290 aaPredicted RBP11.23□□□□□ -0.61
USB1-216ENST00000624720 NOP2P46087 812 aaKnown RBP11.23□□□□□ -0.61
USB1-216ENST00000624720 VWDEQ8N2E2 1590 aa11.23□□□□□ -0.61
USB1-216ENST00000624720 CCDC97Q96F63 343 aaPredicted RBP11.23□□□□□ -0.61
USB1-216ENST00000624720 FBLN1P23142 703 aa11.23□□□□□ -0.61
USB1-216ENST00000624720 LRCH2Q5VUJ6 765 aa11.23□□□□□ -0.61
USB1-216ENST00000624720 BRMS1Q9HCU9 246 aa11.23□□□□□ -0.61
USB1-216ENST00000624720 GPRASP1Q5JY77 1395 aa11.23□□□□□ -0.61
USB1-216ENST00000624720 SETDB1Q15047 1291 aa11.22□□□□□ -0.61
USB1-216ENST00000624720 ICE2Q659A1 982 aa11.22□□□□□ -0.61
USB1-216ENST00000624720 MNS1Q8NEH6 495 aa11.22□□□□□ -0.61
USB1-216ENST00000624720 NBPF3Q9H094 633 aa11.22□□□□□ -0.61
USB1-216ENST00000624720 KTN1Q86UP2 1357 aaKnown RBP11.22□□□□□ -0.61
USB1-216ENST00000624720 DHX16O60231 1041 aaKnown RBP11.22□□□□□ -0.61
USB1-216ENST00000624720 CCDC146Q8IYE0 955 aa11.22□□□□□ -0.61
USB1-216ENST00000624720 MROH2AA6NES4 1674 aa11.22□□□□□ -0.61
USB1-216ENST00000624720 SIGLEC1Q9BZZ2 1709 aa11.22□□□□□ -0.61
USB1-216ENST00000624720 SCAF11Q99590 1463 aaKnown RBP11.22□□□□□ -0.61
USB1-216ENST00000624720 GOLGA6CA6NDK9 693 aa11.22□□□□□ -0.61
USB1-216ENST00000624720 GOLGA6BA6NDN3 693 aa11.22□□□□□ -0.61
USB1-216ENST00000624720 GOLGA6DP0CG33 693 aa11.22□□□□□ -0.61
USB1-216ENST00000624720 FAM210AQ96ND0 272 aa11.22□□□□□ -0.61
USB1-216ENST00000624720 GOLGA6AQ9NYA3 693 aa11.22□□□□□ -0.61
USB1-216ENST00000624720 RSPH14Q9UHP6 348 aa11.22□□□□□ -0.61
USB1-216ENST00000624720 MADDQ8WXG6 1647 aa11.21□□□□□ -0.61
USB1-216ENST00000624720 CCDC189A1A4V9 331 aa11.21□□□□□ -0.61
USB1-216ENST00000624720 DDX46Q7L014 1031 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms