RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 GLI2P10070 1586 aa10.88□□□□□ -0.67
CDKL5-206ENST00000623610 SRPK2P78362 688 aaKnown RBP10.87□□□□□ -0.67
CDKL5-206ENST00000623610 PLEKHG6Q3KR16 790 aa10.87□□□□□ -0.67
CDKL5-206ENST00000623610 SCYL1Q96KG9 808 aa10.87□□□□□ -0.67
CDKL5-206ENST00000623610 CTDP1Q9Y5B0 961 aaPredicted RBP10.87□□□□□ -0.67
CDKL5-206ENST00000623610 RRP9O43818 475 aaKnown RBP10.87□□□□□ -0.67
CDKL5-206ENST00000623610 MLLT3P42568 568 aaPredicted RBP10.87□□□□□ -0.67
CDKL5-206ENST00000623610 MKL1Q969V6 931 aa10.87□□□□□ -0.67
CDKL5-206ENST00000623610 IRF2BPLQ9H1B7 796 aa10.87□□□□□ -0.67
CDKL5-206ENST00000623610 HECW1Q76N89 1606 aa10.86□□□□□ -0.67
CDKL5-206ENST00000623610 TMEM88BA6NKF7 163 aa10.86□□□□□ -0.67
CDKL5-206ENST00000623610 DHX38Q92620 1227 aaKnown RBP10.86□□□□□ -0.67
CDKL5-206ENST00000623610 CCAR1Q8IX12 1150 aaKnown RBP10.85□□□□□ -0.67
CDKL5-206ENST00000623610 ANP32BQ92688 251 aaKnown RBP10.85□□□□□ -0.67
CDKL5-206ENST00000623610 PDZRN3Q9UPQ7 1066 aa10.85□□□□□ -0.67
CDKL5-206ENST00000623610 PCF11O94913 1555 aaKnown RBP10.85□□□□□ -0.67
CDKL5-206ENST00000623610 IBSPP21815 317 aaPredicted RBP10.85□□□□□ -0.67
CDKL5-206ENST00000623610 PDE6BP35913 854 aa10.85□□□□□ -0.67
CDKL5-206ENST00000623610 LRRIQ1Q96JM4 1722 aa10.85□□□□□ -0.67
CDKL5-206ENST00000623610 PPRC1Q5VV67 1664 aaKnown RBP10.85□□□□□ -0.67
CDKL5-206ENST00000623610 MAP3K4Q9Y6R4 1608 aa10.85□□□□□ -0.67
CDKL5-206ENST00000623610 ERCC5P28715 1186 aaPredicted RBP10.84□□□□□ -0.67
CDKL5-206ENST00000623610 TAGLNQ01995 201 aaKnown RBP10.84□□□□□ -0.67
CDKL5-206ENST00000623610 ICE2Q659A1 982 aa10.84□□□□□ -0.67
CDKL5-206ENST00000623610 C1orf131Q8NDD1 294 aaKnown RBP10.84□□□□□ -0.67
CDKL5-206ENST00000623610 INO80BQ9C086 356 aaPredicted RBP10.84□□□□□ -0.67
CDKL5-206ENST00000623610 TANGO6Q9C0B7 1094 aa10.84□□□□□ -0.67
CDKL5-206ENST00000623610 GSE1Q14687 1217 aa10.84□□□□□ -0.67
CDKL5-206ENST00000623610 FEZ2Q9UHY8 353 aaPredicted RBP10.84□□□□□ -0.67
CDKL5-206ENST00000623610 RGL3Q3MIN7 710 aa10.83□□□□□ -0.68
CDKL5-206ENST00000623610 TTC30BQ8N4P2 665 aa10.83□□□□□ -0.68
CDKL5-206ENST00000623610 CASKIN1Q8WXD9 1431 aa10.83□□□□□ -0.68
CDKL5-206ENST00000623610 RPUSD2Q8IZ73 545 aaKnown RBP10.82□□□□□ -0.68
CDKL5-206ENST00000623610 CCDC102AQ96A19 550 aa10.82□□□□□ -0.68
CDKL5-206ENST00000623610 BSDC1Q9NW68 430 aaPredicted RBP10.82□□□□□ -0.68
CDKL5-206ENST00000623610 KLF15Q9UIH9 416 aa10.82□□□□□ -0.68
CDKL5-206ENST00000623610 CC2D1BQ5T0F9 858 aaKnown RBP10.82□□□□□ -0.68
CDKL5-206ENST00000623610 C9orf131Q5VYM1 1079 aa10.82□□□□□ -0.68
CDKL5-206ENST00000623610 QTRT2Q9H974 415 aaKnown RBP10.82□□□□□ -0.68
CDKL5-206ENST00000623610 SNRKQ9NRH2 765 aa10.82□□□□□ -0.68
CDKL5-206ENST00000623610 CD109Q6YHK3 1445 aa10.82□□□□□ -0.68
CDKL5-206ENST00000623610 CFAP43Q8NDM7 1665 aa10.82□□□□□ -0.68
CDKL5-206ENST00000623610 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.81□□□□□ -0.68
CDKL5-206ENST00000623610 CFAP70Q5T0N1 1121 aa10.81□□□□□ -0.68
CDKL5-206ENST00000623610 DCAF8Q5TAQ9 597 aa10.81□□□□□ -0.68
CDKL5-206ENST00000623610 FMNL3Q8IVF7 1028 aa10.81□□□□□ -0.68
CDKL5-206ENST00000623610 KAT6BQ8WYB5 2073 aa10.81□□□□□ -0.68
CDKL5-206ENST00000623610 VAMP1P23763 118 aa10.81□□□□□ -0.68
CDKL5-206ENST00000623610 POU5F1Q01860 360 aaKnown RBP10.81□□□□□ -0.68
CDKL5-206ENST00000623610 AMHR2Q16671 573 aa10.81□□□□□ -0.68
CDKL5-206ENST00000623610 ZCRB1Q8TBF4 217 aaKnown RBP10.81□□□□□ -0.68
CDKL5-206ENST00000623610 STAG1Q8WVM7 1258 aa10.81□□□□□ -0.68
CDKL5-206ENST00000623610 PUF60Q9UHX1 559 aaKnown RBP10.81□□□□□ -0.68
CDKL5-206ENST00000623610 PRDM4Q9UKN5 801 aa10.81□□□□□ -0.68
CDKL5-206ENST00000623610 COL4A3BPQ9Y5P4 624 aa10.81□□□□□ -0.68
CDKL5-206ENST00000623610 FYCO1Q9BQS8 1478 aa10.8□□□□□ -0.68
CDKL5-206ENST00000623610 ZNF513Q8N8E2 541 aaPredicted RBP10.8□□□□□ -0.68
CDKL5-206ENST00000623610 IQSEC3Q9UPP2 1182 aaPredicted RBP10.8□□□□□ -0.68
CDKL5-206ENST00000623610 ABCA9Q8IUA7 1624 aa10.8□□□□□ -0.68
CDKL5-206ENST00000623610 TSNAXIP1Q2TAA8 658 aa10.79□□□□□ -0.68
CDKL5-206ENST00000623610 ENOX1Q8TC92 643 aaKnown RBP10.79□□□□□ -0.68
CDKL5-206ENST00000623610 PAGR1Q9BTK6 254 aa10.79□□□□□ -0.68
CDKL5-206ENST00000623610 GDPD2Q9HCC8 539 aa10.79□□□□□ -0.68
CDKL5-206ENST00000623610 CUEDC1Q9NWM3 386 aaPredicted RBP10.79□□□□□ -0.68
CDKL5-206ENST00000623610 SPDYE5A6NIY4 337 aa10.79□□□□□ -0.68
CDKL5-206ENST00000623610 MS4A1P11836 297 aa10.79□□□□□ -0.68
CDKL5-206ENST00000623610 ZNF512BQ96KM6 892 aaPredicted RBP10.79□□□□□ -0.68
CDKL5-206ENST00000623610 SPC25Q9HBM1 224 aa10.79□□□□□ -0.68
CDKL5-206ENST00000623610 CEP126Q9P2H0 1117 aa10.79□□□□□ -0.68
CDKL5-206ENST00000623610 KDM6BO15054 1643 aa10.79□□□□□ -0.68
CDKL5-206ENST00000623610 C7P10643 843 aa10.78□□□□□ -0.68
CDKL5-206ENST00000623610 DDX27Q96GQ7 796 aaKnown RBP10.78□□□□□ -0.68
CDKL5-206ENST00000623610 TEX14Q8IWB6 1497 aa10.78□□□□□ -0.68
CDKL5-206ENST00000623610 TCERG1O14776 1098 aaKnown RBP10.78□□□□□ -0.68
CDKL5-206ENST00000623610 BMS1Q14692 1282 aaKnown RBP10.78□□□□□ -0.68
CDKL5-206ENST00000623610 ANKRD23Q86SG2 305 aa10.78□□□□□ -0.68
CDKL5-206ENST00000623610 PDILTQ8N807 584 aa10.78□□□□□ -0.68
CDKL5-206ENST00000623610 IL17RAQ96F46 866 aa10.78□□□□□ -0.68
CDKL5-206ENST00000623610 SFMBT1Q9UHJ3 866 aa10.78□□□□□ -0.68
CDKL5-206ENST00000623610 MAGI3Q5TCQ9 1506 aa10.78□□□□□ -0.68
CDKL5-206ENST00000623610 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.78□□□□□ -0.68
CDKL5-206ENST00000623610 CCDC18Q5T9S5 1454 aa10.77□□□□□ -0.68
CDKL5-206ENST00000623610 GPR37O15354 613 aa10.77□□□□□ -0.69
CDKL5-206ENST00000623610 XPCQ01831 940 aaPredicted RBP10.77□□□□□ -0.69
CDKL5-206ENST00000623610 JAZF1Q86VZ6 243 aa10.77□□□□□ -0.69
CDKL5-206ENST00000623610 DMGDHQ9UI17 866 aaKnown RBP10.77□□□□□ -0.69
CDKL5-206ENST00000623610 MTA1Q13330 715 aa10.76□□□□□ -0.69
CDKL5-206ENST00000623610 HSP90AB3PQ58FF7 597 aa10.76□□□□□ -0.69
CDKL5-206ENST00000623610 PROCA1Q8NCQ7 364 aaPredicted RBP10.76□□□□□ -0.69
CDKL5-206ENST00000623610 TRIM34Q9BYJ4 488 aa10.76□□□□□ -0.69
CDKL5-206ENST00000623610 TTC37Q6PGP7 1564 aa10.76□□□□□ -0.69
CDKL5-206ENST00000623610 COL17A1Q9UMD9 1497 aaPredicted RBP10.76□□□□□ -0.69
CDKL5-206ENST00000623610 KIF14Q15058 1648 aa10.76□□□□□ -0.69
CDKL5-206ENST00000623610 NEXNQ0ZGT2 675 aa10.76□□□□□ -0.69
CDKL5-206ENST00000623610 NT5DC4Q86YG4 428 aa10.76□□□□□ -0.69
CDKL5-206ENST00000623610 OXER1Q8TDS5 423 aa10.76□□□□□ -0.69
CDKL5-206ENST00000623610 PCDH12Q9NPG4 1184 aa10.76□□□□□ -0.69
CDKL5-206ENST00000623610 TROQ12816 1431 aaPredicted RBP10.75□□□□□ -0.69
CDKL5-206ENST00000623610 CT47B1P0C2W7 299 aaPredicted RBP10.75□□□□□ -0.69
CDKL5-206ENST00000623610 PCGF5Q86SE9 256 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms