RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 ITPRIPQ8IWB1 547 aa16.89■□□□□ 0.29
PCDHB17P-202ENST00000623466 SPATA31D1Q6ZQQ2 1576 aa16.89■□□□□ 0.29
PCDHB17P-202ENST00000623466 MFAP1P55081 439 aaKnown RBP16.88■□□□□ 0.29
PCDHB17P-202ENST00000623466 TSPYL6Q8N831 410 aa16.88■□□□□ 0.29
PCDHB17P-202ENST00000623466 TRIM27P14373 513 aa16.88■□□□□ 0.29
PCDHB17P-202ENST00000623466 HDGFP51858 240 aaKnown RBP16.88■□□□□ 0.29
PCDHB17P-202ENST00000623466 NINLQ9Y2I6 1382 aa16.87■□□□□ 0.29
PCDHB17P-202ENST00000623466 RWDD1Q9H446 243 aaPredicted RBP16.87■□□□□ 0.29
PCDHB17P-202ENST00000623466 ZKSCAN2Q63HK3 967 aa16.87■□□□□ 0.29
PCDHB17P-202ENST00000623466 VIRMAQ69YN4 1812 aaKnown RBP16.86■□□□□ 0.29
PCDHB17P-202ENST00000623466 DZIP1LQ8IYY4 767 aaKnown RBP16.86■□□□□ 0.29
PCDHB17P-202ENST00000623466 TMEM2Q9UHN6 1383 aa16.86■□□□□ 0.29
PCDHB17P-202ENST00000623466 ACEP12821 1306 aa16.86■□□□□ 0.29
PCDHB17P-202ENST00000623466 FCHSD2O94868 740 aa16.85■□□□□ 0.29
PCDHB17P-202ENST00000623466 PANK2Q9BZ23 570 aa16.85■□□□□ 0.29
PCDHB17P-202ENST00000623466 AMOTL2Q9Y2J4 779 aa16.85■□□□□ 0.29
PCDHB17P-202ENST00000623466 FER1L4A9Z1Z3 1794 aa16.85■□□□□ 0.29
PCDHB17P-202ENST00000623466 IL13P35225 146 aa16.85■□□□□ 0.29
PCDHB17P-202ENST00000623466 HSP90AB2PQ58FF8 381 aa16.84■□□□□ 0.29
PCDHB17P-202ENST00000623466 XRCC6P12956 609 aaKnown RBP eCLIP16.83■□□□□ 0.29
PCDHB17P-202ENST00000623466 TMEM57Q8N5G2 664 aa16.83■□□□□ 0.29
PCDHB17P-202ENST00000623466 COL3A1P02461 1466 aaPredicted RBP16.83■□□□□ 0.28
PCDHB17P-202ENST00000623466 MVPQ14764 893 aaKnown RBP16.83■□□□□ 0.28
PCDHB17P-202ENST00000623466 KRT24Q2M2I5 525 aa16.83■□□□□ 0.28
PCDHB17P-202ENST00000623466 MCM4P33991 863 aa16.83■□□□□ 0.28
PCDHB17P-202ENST00000623466 SULT6B1Q6IMI4 303 aa16.83■□□□□ 0.28
PCDHB17P-202ENST00000623466 C22orf23Q9BZE7 217 aa16.83■□□□□ 0.28
PCDHB17P-202ENST00000623466 ANKRD26Q9UPS8 1709 aa16.82■□□□□ 0.28
PCDHB17P-202ENST00000623466 L1TD1Q5T7N2 865 aaKnown RBP16.82■□□□□ 0.28
PCDHB17P-202ENST00000623466 CPS1P31327 1500 aa16.82■□□□□ 0.28
PCDHB17P-202ENST00000623466 C1orf115Q9H7X2 142 aa16.82■□□□□ 0.28
PCDHB17P-202ENST00000623466 EID1Q9Y6B2 187 aa16.82■□□□□ 0.28
PCDHB17P-202ENST00000623466 PNPLA6Q8IY17 1366 aa16.81■□□□□ 0.28
PCDHB17P-202ENST00000623466 GOLGA6L3A6NEY3 463 aa16.81■□□□□ 0.28
PCDHB17P-202ENST00000623466 MIS18AQ9NYP9 233 aa16.81■□□□□ 0.28
PCDHB17P-202ENST00000623466 NRXN3Q9Y4C0 1643 aa16.8■□□□□ 0.28
PCDHB17P-202ENST00000623466 NFE2L2Q16236 605 aa16.8■□□□□ 0.28
PCDHB17P-202ENST00000623466 ATF7IPQ6VMQ6 1270 aa16.8■□□□□ 0.28
PCDHB17P-202ENST00000623466 ADAMTSL3P82987 1691 aa16.8■□□□□ 0.28
PCDHB17P-202ENST00000623466 MCM10Q7L590 875 aa16.79■□□□□ 0.28
PCDHB17P-202ENST00000623466 NGDNQ8NEJ9 315 aaKnown RBP16.79■□□□□ 0.28
PCDHB17P-202ENST00000623466 TTC21BQ7Z4L5 1316 aa16.79■□□□□ 0.28
PCDHB17P-202ENST00000623466 C14orf37Q86TY3 774 aa16.79■□□□□ 0.28
PCDHB17P-202ENST00000623466 C8orf58Q8NAV2 365 aa16.78■□□□□ 0.28
PCDHB17P-202ENST00000623466 MBIPQ9NS73 344 aa16.78■□□□□ 0.28
PCDHB17P-202ENST00000623466 CPSF1Q10570 1443 aaKnown RBP16.78■□□□□ 0.28
PCDHB17P-202ENST00000623466 RIMS1Q86UR5 1692 aaKnown RBP16.78■□□□□ 0.28
PCDHB17P-202ENST00000623466 EIF4A2Q14240 407 aaKnown RBP16.78■□□□□ 0.28
PCDHB17P-202ENST00000623466 ADAMTS13Q76LX8 1427 aa16.78■□□□□ 0.28
PCDHB17P-202ENST00000623466 BCL11BQ9C0K0 894 aaPredicted RBP16.78■□□□□ 0.28
PCDHB17P-202ENST00000623466 FOXO3O43524 673 aa16.77■□□□□ 0.28
PCDHB17P-202ENST00000623466 TRAK2O60296 914 aa16.77■□□□□ 0.28
PCDHB17P-202ENST00000623466 C3P01024 1663 aa16.77■□□□□ 0.27
PCDHB17P-202ENST00000623466 EDC4Q6P2E9 1401 aaKnown RBP16.77■□□□□ 0.27
PCDHB17P-202ENST00000623466 LTV1Q96GA3 475 aaPredicted RBP16.76■□□□□ 0.27
PCDHB17P-202ENST00000623466 ZBTB7CA1YPR0 619 aa16.76■□□□□ 0.27
PCDHB17P-202ENST00000623466 ZNF692Q9BU19 519 aaPredicted RBP16.76■□□□□ 0.27
PCDHB17P-202ENST00000623466 CHMP5Q9NZZ3 219 aa16.76■□□□□ 0.27
PCDHB17P-202ENST00000623466 DLC1Q96QB1 1528 aa16.75■□□□□ 0.27
PCDHB17P-202ENST00000623466 PTPRUQ92729 1446 aa16.75■□□□□ 0.27
PCDHB17P-202ENST00000623466 VAMP4O75379 141 aa16.75■□□□□ 0.27
PCDHB17P-202ENST00000623466 KCNA6P17658 529 aa16.75■□□□□ 0.27
PCDHB17P-202ENST00000623466 MAP2P11137 1827 aaKnown RBP16.75■□□□□ 0.27
PCDHB17P-202ENST00000623466 KIF20BQ96Q89 1820 aa16.74■□□□□ 0.27
PCDHB17P-202ENST00000623466 LRRC7Q96NW7 1537 aa16.74■□□□□ 0.27
PCDHB17P-202ENST00000623466 FSD2A1L4K1 749 aa16.73■□□□□ 0.27
PCDHB17P-202ENST00000623466 LNPKQ9C0E8 428 aa16.73■□□□□ 0.27
PCDHB17P-202ENST00000623466 ATP7BP35670 1465 aa16.73■□□□□ 0.27
PCDHB17P-202ENST00000623466 TWISTNBQ3B726 338 aaPredicted RBP16.73■□□□□ 0.27
PCDHB17P-202ENST00000623466 CLCN1P35523 988 aa16.72■□□□□ 0.27
PCDHB17P-202ENST00000623466 HSCBQ8IWL3 235 aa16.72■□□□□ 0.27
PCDHB17P-202ENST00000623466 FOXD4L1Q9NU39 408 aa16.72■□□□□ 0.27
PCDHB17P-202ENST00000623466 PRDM4Q9UKN5 801 aa16.72■□□□□ 0.27
PCDHB17P-202ENST00000623466 KNDC1Q76NI1 1749 aa16.72■□□□□ 0.27
PCDHB17P-202ENST00000623466 PDIA4P13667 645 aaKnown RBP16.71■□□□□ 0.27
PCDHB17P-202ENST00000623466 FAM135BQ49AJ0 1406 aa16.71■□□□□ 0.27
PCDHB17P-202ENST00000623466 MED14O60244 1454 aa16.71■□□□□ 0.27
PCDHB17P-202ENST00000623466 NLRP6P59044 892 aa16.71■□□□□ 0.27
PCDHB17P-202ENST00000623466 DDX19BQ9UMR2 479 aa16.71■□□□□ 0.26
PCDHB17P-202ENST00000623466 ADGRB2O60241 1585 aa16.7■□□□□ 0.26
PCDHB17P-202ENST00000623466 IL16Q14005 1332 aa16.7■□□□□ 0.26
PCDHB17P-202ENST00000623466 THEMISQ8N1K5 641 aaPredicted RBP16.7■□□□□ 0.26
PCDHB17P-202ENST00000623466 UBR1Q8IWV7 1749 aa16.7■□□□□ 0.26
PCDHB17P-202ENST00000623466 MAP3K19Q56UN5 1328 aa16.69■□□□□ 0.26
PCDHB17P-202ENST00000623466 AMPHP49418 695 aa16.69■□□□□ 0.26
PCDHB17P-202ENST00000623466 GNAI1P63096 354 aa16.69■□□□□ 0.26
PCDHB17P-202ENST00000623466 IPO8O15397 1037 aaKnown RBP16.69■□□□□ 0.26
PCDHB17P-202ENST00000623466 HDAC1Q13547 482 aaPredicted RBP16.69■□□□□ 0.26
PCDHB17P-202ENST00000623466 NECTIN2Q92692 538 aa16.69■□□□□ 0.26
PCDHB17P-202ENST00000623466 ZBTB40Q9NUA8 1239 aa16.69■□□□□ 0.26
PCDHB17P-202ENST00000623466 XPCQ01831 940 aaPredicted RBP16.68■□□□□ 0.26
PCDHB17P-202ENST00000623466 MRPL50Q8N5N7 158 aaKnown RBP16.68■□□□□ 0.26
PCDHB17P-202ENST00000623466 SIRT1Q96EB6 747 aa16.68■□□□□ 0.26
PCDHB17P-202ENST00000623466 PLEKHG3A1L390 1219 aa16.68■□□□□ 0.26
PCDHB17P-202ENST00000623466 CALD1Q05682 793 aaKnown RBP16.68■□□□□ 0.26
PCDHB17P-202ENST00000623466 CT47B1P0C2W7 299 aaPredicted RBP16.67■□□□□ 0.26
PCDHB17P-202ENST00000623466 SMC5Q8IY18 1101 aa16.67■□□□□ 0.26
PCDHB17P-202ENST00000623466 USHBP1Q8N6Y0 703 aa16.67■□□□□ 0.26
PCDHB17P-202ENST00000623466 PLEKHG1Q9ULL1 1385 aa16.67■□□□□ 0.26
PCDHB17P-202ENST00000623466 CFAP44Q96MT7 982 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms