RNA–Protein interactions for RNA: ENST00000622768.4

GRIA3-209, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene GRIA3, Length 5,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-209ENST00000622768 IP6K1Q92551 441 aa11.64□□□□□ -0.55
GRIA3-209ENST00000622768 GNAT3A8MTJ3 354 aa11.64□□□□□ -0.55
GRIA3-209ENST00000622768 GCC2Q8IWJ2 1684 aa11.64□□□□□ -0.55
GRIA3-209ENST00000622768 SPATA31A3Q5VYP0 1347 aa11.64□□□□□ -0.55
GRIA3-209ENST00000622768 DDRGK1Q96HY6 314 aa11.64□□□□□ -0.55
GRIA3-209ENST00000622768 GPATCH3Q96I76 525 aa11.64□□□□□ -0.55
GRIA3-209ENST00000622768 CCNL1Q9UK58 526 aaPredicted RBP11.64□□□□□ -0.55
GRIA3-209ENST00000622768 MYO3AQ8NEV4 1616 aa11.63□□□□□ -0.55
GRIA3-209ENST00000622768 CASC1Q6TDU7 716 aa11.63□□□□□ -0.55
GRIA3-209ENST00000622768 CWC22Q9HCG8 908 aaKnown RBP11.63□□□□□ -0.55
GRIA3-209ENST00000622768 FLT4P35916 1363 aa11.63□□□□□ -0.55
GRIA3-209ENST00000622768 RUNDC1Q96C34 613 aa11.63□□□□□ -0.55
GRIA3-209ENST00000622768 LRRFIP1Q32MZ4 808 aaKnown RBP11.62□□□□□ -0.55
GRIA3-209ENST00000622768 FMNL2Q96PY5 1086 aa11.62□□□□□ -0.55
GRIA3-209ENST00000622768 MYOM2P54296 1465 aa11.62□□□□□ -0.55
GRIA3-209ENST00000622768 PTCH1Q13635 1447 aa11.62□□□□□ -0.55
GRIA3-209ENST00000622768 POLR3AO14802 1390 aaPredicted RBP11.62□□□□□ -0.55
GRIA3-209ENST00000622768 HMMRO75330 724 aa11.62□□□□□ -0.55
GRIA3-209ENST00000622768 KIF1BO60333 1816 aa11.62□□□□□ -0.55
GRIA3-209ENST00000622768 RRS1Q15050 365 aaKnown RBP11.62□□□□□ -0.55
GRIA3-209ENST00000622768 FBXW7Q969H0 707 aa11.62□□□□□ -0.55
GRIA3-209ENST00000622768 VPS72Q15906 364 aa11.62□□□□□ -0.55
GRIA3-209ENST00000622768 RPGRQ92834 1020 aaKnown RBP11.62□□□□□ -0.55
GRIA3-209ENST00000622768 HMOX1P09601 288 aa11.61□□□□□ -0.55
GRIA3-209ENST00000622768 ATP6V1AP38606 617 aa11.61□□□□□ -0.55
GRIA3-209ENST00000622768 RIPK4P57078 832 aa11.61□□□□□ -0.55
GRIA3-209ENST00000622768 TNS3Q68CZ2 1445 aa11.61□□□□□ -0.55
GRIA3-209ENST00000622768 METP08581 1390 aa11.61□□□□□ -0.55
GRIA3-209ENST00000622768 BTBD11A6QL63 1104 aa11.61□□□□□ -0.55
GRIA3-209ENST00000622768 TRAPPC3LQ5T215 181 aa11.61□□□□□ -0.55
GRIA3-209ENST00000622768 CCDC30Q5VVM6 783 aa11.61□□□□□ -0.55
GRIA3-209ENST00000622768 ACSBG1Q96GR2 724 aa11.61□□□□□ -0.55
GRIA3-209ENST00000622768 EDC4Q6P2E9 1401 aaKnown RBP11.6□□□□□ -0.55
GRIA3-209ENST00000622768 RICTORQ6R327 1708 aa11.6□□□□□ -0.55
GRIA3-209ENST00000622768 KIDINS220Q9ULH0 1771 aa11.6□□□□□ -0.55
GRIA3-209ENST00000622768 SPATA31D1Q6ZQQ2 1576 aa11.6□□□□□ -0.55
GRIA3-209ENST00000622768 FCHSD2O94868 740 aa11.6□□□□□ -0.55
GRIA3-209ENST00000622768 MROH2AA6NES4 1674 aa11.6□□□□□ -0.55
GRIA3-209ENST00000622768 CARD10Q9BWT7 1032 aa11.59□□□□□ -0.55
GRIA3-209ENST00000622768 NYXQ9GZU5 481 aa11.59□□□□□ -0.55
GRIA3-209ENST00000622768 C9orf78Q9NZ63 289 aaPredicted RBP11.59□□□□□ -0.55
GRIA3-209ENST00000622768 PRAG1Q86YV5 1406 aa11.59□□□□□ -0.55
GRIA3-209ENST00000622768 SPON1Q9HCB6 807 aa11.59□□□□□ -0.55
GRIA3-209ENST00000622768 IQGAP3Q86VI3 1631 aa11.59□□□□□ -0.55
GRIA3-209ENST00000622768 RRP7AQ9Y3A4 280 aaKnown RBP11.59□□□□□ -0.55
GRIA3-209ENST00000622768 DCAF5Q96JK2 942 aa11.58□□□□□ -0.55
GRIA3-209ENST00000622768 PPP1R42Q7Z4L9 355 aa11.58□□□□□ -0.56
GRIA3-209ENST00000622768 PDZRN3Q9UPQ7 1066 aa11.58□□□□□ -0.56
GRIA3-209ENST00000622768 PHF14O94880 888 aa11.58□□□□□ -0.56
GRIA3-209ENST00000622768 CFAP44Q96MT7 982 aa11.58□□□□□ -0.56
GRIA3-209ENST00000622768 SOGA3Q5TF21 947 aa11.57□□□□□ -0.56
GRIA3-209ENST00000622768 GNL3LQ9NVN8 582 aaKnown RBP11.57□□□□□ -0.56
GRIA3-209ENST00000622768 CTDP1Q9Y5B0 961 aaPredicted RBP11.57□□□□□ -0.56
GRIA3-209ENST00000622768 ATP7BP35670 1465 aa11.57□□□□□ -0.56
GRIA3-209ENST00000622768 PRKAR2BP31323 418 aa11.57□□□□□ -0.56
GRIA3-209ENST00000622768 RNF17Q9BXT8 1623 aaKnown RBP11.57□□□□□ -0.56
GRIA3-209ENST00000622768 LMOD1P29536 600 aaPredicted RBP11.56□□□□□ -0.56
GRIA3-209ENST00000622768 ROBO2Q9HCK4 1378 aa11.56□□□□□ -0.56
GRIA3-209ENST00000622768 UNC13BO14795 1591 aa11.56□□□□□ -0.56
GRIA3-209ENST00000622768 C1orf167Q5SNV9 1468 aa11.56□□□□□ -0.56
GRIA3-209ENST00000622768 DDX17Q92841 729 aaKnown RBP11.56□□□□□ -0.56
GRIA3-209ENST00000622768 BEGAINQ9BUH8 593 aa11.56□□□□□ -0.56
GRIA3-209ENST00000622768 BLMP54132 1417 aaPredicted RBP11.55□□□□□ -0.56
GRIA3-209ENST00000622768 PAXIP1Q6ZW49 1069 aaPredicted RBP11.55□□□□□ -0.56
GRIA3-209ENST00000622768 TMOD2Q9NZR1 351 aa11.55□□□□□ -0.56
GRIA3-209ENST00000622768 SETDB2Q96T68 719 aa11.55□□□□□ -0.56
GRIA3-209ENST00000622768 UPF2Q9HAU5 1272 aaKnown RBP11.55□□□□□ -0.56
GRIA3-209ENST00000622768 CROCC2H7BZ55 1655 aa11.55□□□□□ -0.56
GRIA3-209ENST00000622768 BICDL1Q6ZP65 573 aa11.55□□□□□ -0.56
GRIA3-209ENST00000622768 ZNF622Q969S3 477 aaKnown RBP eCLIP11.55□□□□□ -0.56
GRIA3-209ENST00000622768 ISY1Q9ULR0 285 aaKnown RBP11.55□□□□□ -0.56
GRIA3-209ENST00000622768 PTCD1O75127 700 aaKnown RBP11.55□□□□□ -0.56
GRIA3-209ENST00000622768 TRIM37O94972 964 aa11.55□□□□□ -0.56
GRIA3-209ENST00000622768 AKAP4Q5JQC9 854 aa11.55□□□□□ -0.56
GRIA3-209ENST00000622768 HTATSF1O43719 755 aaKnown RBP11.54□□□□□ -0.56
GRIA3-209ENST00000622768 JDP2Q8WYK2 163 aa11.54□□□□□ -0.56
GRIA3-209ENST00000622768 RALGAPBQ86X10 1494 aa11.54□□□□□ -0.56
GRIA3-209ENST00000622768 FRAT1Q92837 279 aaPredicted RBP11.54□□□□□ -0.56
GRIA3-209ENST00000622768 API5Q9BZZ5 524 aaKnown RBP11.54□□□□□ -0.56
GRIA3-209ENST00000622768 SLC4A10Q6U841 1118 aa11.54□□□□□ -0.56
GRIA3-209ENST00000622768 WDR17Q8IZU2 1322 aa11.53□□□□□ -0.56
GRIA3-209ENST00000622768 GRIN3BO60391 1043 aa11.53□□□□□ -0.56
GRIA3-209ENST00000622768 NLGN1Q8N2Q7 840 aa11.53□□□□□ -0.56
GRIA3-209ENST00000622768 RTL1A6NKG5 1358 aa11.53□□□□□ -0.56
GRIA3-209ENST00000622768 CFAP65Q6ZU64 1925 aaKnown RBP11.53□□□□□ -0.56
GRIA3-209ENST00000622768 CCER2I3L3R5 266 aa11.53□□□□□ -0.56
GRIA3-209ENST00000622768 SLC27A3Q5K4L6 730 aa11.53□□□□□ -0.56
GRIA3-209ENST00000622768 OVOS2A0A0G2JMS6 1433 aa11.53□□□□□ -0.56
GRIA3-209ENST00000622768 OVOS2A0A0J9YW53 1432 aa11.53□□□□□ -0.56
GRIA3-209ENST00000622768 OVOS2Q6IE36 1432 aa11.53□□□□□ -0.56
GRIA3-209ENST00000622768 KIAA0232Q92628 1395 aa11.53□□□□□ -0.56
GRIA3-209ENST00000622768 TAF7Q15545 349 aaPredicted RBP11.53□□□□□ -0.56
GRIA3-209ENST00000622768 SLIT1O75093 1534 aa11.53□□□□□ -0.56
GRIA3-209ENST00000622768 HOXC9P31274 260 aa11.52□□□□□ -0.56
GRIA3-209ENST00000622768 IGHMBP2P38935 993 aaKnown RBP11.52□□□□□ -0.56
GRIA3-209ENST00000622768 SUPT20HQ8NEM7 779 aa11.52□□□□□ -0.56
GRIA3-209ENST00000622768 FRMPD1Q5SYB0 1578 aa11.52□□□□□ -0.56
GRIA3-209ENST00000622768 CEP152O94986 1710 aa11.52□□□□□ -0.57
GRIA3-209ENST00000622768 NBPF6Q5VWK0 638 aa11.52□□□□□ -0.57
GRIA3-209ENST00000622768 DPY19L2Q6NUT2 758 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms