RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 CCT4P50991 539 aaKnown RBP16.21■□□□□ 0.18
SIRPA-204ENST00000622179 PUS7Q96PZ0 661 aaKnown RBP16.21■□□□□ 0.18
SIRPA-204ENST00000622179 PPP6R1Q9UPN7 881 aa16.21■□□□□ 0.18
SIRPA-204ENST00000622179 NEK4P51957 841 aa16.2■□□□□ 0.18
SIRPA-204ENST00000622179 DDX58O95786 925 aaKnown RBP16.2■□□□□ 0.18
SIRPA-204ENST00000622179 ZNF530Q6P9A1 599 aaPredicted RBP16.2■□□□□ 0.18
SIRPA-204ENST00000622179 TBC1D2Q9BYX2 928 aa16.2■□□□□ 0.18
SIRPA-204ENST00000622179 HSP90B1P14625 803 aaKnown RBP16.2■□□□□ 0.18
SIRPA-204ENST00000622179 PROSER2Q86WR7 435 aaPredicted RBP16.2■□□□□ 0.18
SIRPA-204ENST00000622179 IL16Q14005 1332 aa16.19■□□□□ 0.18
SIRPA-204ENST00000622179 G3BP1Q13283 466 aaKnown RBP eCLIP16.19■□□□□ 0.18
SIRPA-204ENST00000622179 RIC3Q7Z5B4 369 aa16.19■□□□□ 0.18
SIRPA-204ENST00000622179 TSPYL6Q8N831 410 aa16.19■□□□□ 0.18
SIRPA-204ENST00000622179 SYAP1Q96A49 352 aaPredicted RBP16.19■□□□□ 0.18
SIRPA-204ENST00000622179 CHD1O14646 1710 aa16.19■□□□□ 0.18
SIRPA-204ENST00000622179 KDM5DQ9BY66 1539 aa16.19■□□□□ 0.18
SIRPA-204ENST00000622179 SEC24BO95487 1268 aa16.19■□□□□ 0.18
SIRPA-204ENST00000622179 RPAP2Q8IXW5 612 aaPredicted RBP16.19■□□□□ 0.18
SIRPA-204ENST00000622179 ATF3P18847 181 aa16.18■□□□□ 0.18
SIRPA-204ENST00000622179 PLEKHO1Q53GL0 409 aaPredicted RBP16.18■□□□□ 0.18
SIRPA-204ENST00000622179 C8orf58Q8NAV2 365 aa16.18■□□□□ 0.18
SIRPA-204ENST00000622179 NPHP1O15259 732 aa16.18■□□□□ 0.18
SIRPA-204ENST00000622179 GLIPR1L2Q4G1C9 344 aa16.18■□□□□ 0.18
SIRPA-204ENST00000622179 ANKLE2Q86XL3 938 aa16.18■□□□□ 0.18
SIRPA-204ENST00000622179 IL1RAPL2Q9NP60 686 aa16.18■□□□□ 0.18
SIRPA-204ENST00000622179 RIMS2Q9UQ26 1411 aa16.18■□□□□ 0.18
SIRPA-204ENST00000622179 YTHDC2Q9H6S0 1430 aaKnown RBP16.18■□□□□ 0.18
SIRPA-204ENST00000622179 GNAT3A8MTJ3 354 aa16.18■□□□□ 0.18
SIRPA-204ENST00000622179 PPIP5K1Q6PFW1 1433 aa16.17■□□□□ 0.18
SIRPA-204ENST00000622179 NUCB2P80303 420 aa16.17■□□□□ 0.18
SIRPA-204ENST00000622179 LRRCC1Q9C099 1032 aa16.17■□□□□ 0.18
SIRPA-204ENST00000622179 ABCC1P33527 1531 aa16.17■□□□□ 0.18
SIRPA-204ENST00000622179 MAP4K4O95819 1239 aaPredicted RBP16.17■□□□□ 0.18
SIRPA-204ENST00000622179 RUFY2Q8WXA3 655 aa16.16■□□□□ 0.18
SIRPA-204ENST00000622179 KDM2BQ8NHM5 1336 aa16.16■□□□□ 0.18
SIRPA-204ENST00000622179 RABEP1Q15276 862 aa16.16■□□□□ 0.18
SIRPA-204ENST00000622179 SRCIN1Q9C0H9 1055 aa16.16■□□□□ 0.18
SIRPA-204ENST00000622179 ADCY10Q96PN6 1610 aa16.16■□□□□ 0.18
SIRPA-204ENST00000622179 HSP90AB4PQ58FF6 505 aa16.16■□□□□ 0.18
SIRPA-204ENST00000622179 EVA1CP58658 441 aa16.15■□□□□ 0.18
SIRPA-204ENST00000622179 KRT24Q2M2I5 525 aa16.15■□□□□ 0.18
SIRPA-204ENST00000622179 CLASRPQ8N2M8 674 aaKnown RBP16.15■□□□□ 0.18
SIRPA-204ENST00000622179 K7ELQ4 463 aaPredicted RBP16.15■□□□□ 0.18
SIRPA-204ENST00000622179 TTC21BQ7Z4L5 1316 aa16.15■□□□□ 0.18
SIRPA-204ENST00000622179 POGZQ7Z3K3 1410 aa16.15■□□□□ 0.18
SIRPA-204ENST00000622179 UHRF1BP1LA0JNW5 1464 aa16.15■□□□□ 0.18
SIRPA-204ENST00000622179 ZKSCAN1P17029 563 aaPredicted RBP16.14■□□□□ 0.18
SIRPA-204ENST00000622179 MCM4P33991 863 aa16.14■□□□□ 0.18
SIRPA-204ENST00000622179 TBC1D32Q96NH3 1257 aa16.14■□□□□ 0.18
SIRPA-204ENST00000622179 TNRQ92752 1358 aa16.14■□□□□ 0.17
SIRPA-204ENST00000622179 HDAC1Q13547 482 aaPredicted RBP16.14■□□□□ 0.17
SIRPA-204ENST00000622179 ZC3H6P61129 1189 aaKnown RBP16.14■□□□□ 0.17
SIRPA-204ENST00000622179 DRC7Q8IY82 874 aa16.14■□□□□ 0.17
SIRPA-204ENST00000622179 TRIM35Q9UPQ4 493 aa16.14■□□□□ 0.17
SIRPA-204ENST00000622179 ERC2O15083 957 aa16.14■□□□□ 0.17
SIRPA-204ENST00000622179 SRGAP3O43295 1099 aa16.13■□□□□ 0.17
SIRPA-204ENST00000622179 VAMP4O75379 141 aa16.13■□□□□ 0.17
SIRPA-204ENST00000622179 EIF4A2Q14240 407 aaKnown RBP16.13■□□□□ 0.17
SIRPA-204ENST00000622179 ERVK-7P63135 1459 aa16.13■□□□□ 0.17
SIRPA-204ENST00000622179 FOXO3O43524 673 aa16.13■□□□□ 0.17
SIRPA-204ENST00000622179 ZCCHC11Q5TAX3 1644 aaKnown RBP16.13■□□□□ 0.17
SIRPA-204ENST00000622179 RSPH6AQ9H0K4 717 aa16.12■□□□□ 0.17
SIRPA-204ENST00000622179 INSRP06213 1382 aa16.12■□□□□ 0.17
SIRPA-204ENST00000622179 BTBD11A6QL63 1104 aa16.12■□□□□ 0.17
SIRPA-204ENST00000622179 MRPL50Q8N5N7 158 aaKnown RBP16.12■□□□□ 0.17
SIRPA-204ENST00000622179 TRPM2O94759 1503 aa16.11■□□□□ 0.17
SIRPA-204ENST00000622179 PHF8Q9UPP1 1060 aa16.11■□□□□ 0.17
SIRPA-204ENST00000622179 PRDM15P57071 1507 aaPredicted RBP16.11■□□□□ 0.17
SIRPA-204ENST00000622179 NUCB1Q02818 461 aa16.11■□□□□ 0.17
SIRPA-204ENST00000622179 TBC1D9Q6ZT07 1266 aa16.11■□□□□ 0.17
SIRPA-204ENST00000622179 TAF7Q15545 349 aaPredicted RBP16.1■□□□□ 0.17
SIRPA-204ENST00000622179 CNTROBQ8N137 903 aa16.1■□□□□ 0.17
SIRPA-204ENST00000622179 MYL6BP14649 208 aa16.1■□□□□ 0.17
SIRPA-204ENST00000622179 NUTM1Q86Y26 1132 aa16.1■□□□□ 0.17
SIRPA-204ENST00000622179 SIL1Q9H173 461 aa16.1■□□□□ 0.17
SIRPA-204ENST00000622179 ZBTB40Q9NUA8 1239 aa16.1■□□□□ 0.17
SIRPA-204ENST00000622179 YEATS2Q9ULM3 1422 aa16.1■□□□□ 0.17
SIRPA-204ENST00000622179 VPS37CA5D8V6 355 aaPredicted RBP16.09■□□□□ 0.17
SIRPA-204ENST00000622179 CAVIN1Q6NZI2 390 aaKnown RBP16.09■□□□□ 0.17
SIRPA-204ENST00000622179 PRPF40AO75400 957 aaKnown RBP16.09■□□□□ 0.17
SIRPA-204ENST00000622179 MEIS3Q99687 375 aa16.09■□□□□ 0.17
SIRPA-204ENST00000622179 ZNF521Q96K83 1311 aa16.09■□□□□ 0.17
SIRPA-204ENST00000622179 GNL2Q13823 731 aaKnown RBP16.09■□□□□ 0.17
SIRPA-204ENST00000622179 BMP2KLQ5H9B9 411 aa16.09■□□□□ 0.17
SIRPA-204ENST00000622179 NEUROD6Q96NK8 337 aa16.09■□□□□ 0.17
SIRPA-204ENST00000622179 TSHZ3Q63HK5 1081 aa16.09■□□□□ 0.17
SIRPA-204ENST00000622179 MPRIPQ6WCQ1 1025 aa16.09■□□□□ 0.17
SIRPA-204ENST00000622179 SMC3Q9UQE7 1217 aa16.09■□□□□ 0.17
SIRPA-204ENST00000622179 ZMYM3Q14202 1370 aa16.08■□□□□ 0.17
SIRPA-204ENST00000622179 ARHGAP45Q92619 1136 aa16.08■□□□□ 0.17
SIRPA-204ENST00000622179 SYTL4Q96C24 671 aaPredicted RBP16.08■□□□□ 0.17
SIRPA-204ENST00000622179 FLIIQ13045 1269 aa16.08■□□□□ 0.16
SIRPA-204ENST00000622179 MRE11P49959 708 aa16.08■□□□□ 0.16
SIRPA-204ENST00000622179 SBNO2Q9Y2G9 1366 aa16.07■□□□□ 0.16
SIRPA-204ENST00000622179 CDC42BPBQ9Y5S2 1711 aa16.07■□□□□ 0.16
SIRPA-204ENST00000622179 KIAA2012Q0VF49 1180 aa16.07■□□□□ 0.16
SIRPA-204ENST00000622179 TRMT2AQ8IZ69 625 aaKnown RBP16.07■□□□□ 0.16
SIRPA-204ENST00000622179 ATP6V1DQ9Y5K8 247 aa16.07■□□□□ 0.16
SIRPA-204ENST00000622179 LRRFIP2Q9Y608 721 aaKnown RBP16.07■□□□□ 0.16
SIRPA-204ENST00000622179 CSPP1Q1MSJ5 1256 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms