RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 TULP2O00295 520 aa6.42□□□□□ -1.38
MATR3-228ENST00000620916 MAP2K1Q02750 393 aaPredicted RBP6.41□□□□□ -1.38
MATR3-228ENST00000620916 ERVK-7P63135 1459 aa6.41□□□□□ -1.38
MATR3-228ENST00000620916 CCDC141Q6ZP82 1450 aa6.41□□□□□ -1.38
MATR3-228ENST00000620916 SHPRHQ149N8 1683 aa6.41□□□□□ -1.38
MATR3-228ENST00000620916 ROBO1Q9Y6N7 1651 aa6.41□□□□□ -1.38
MATR3-228ENST00000620916 IRF6O14896 467 aa6.41□□□□□ -1.38
MATR3-228ENST00000620916 SEMA3FQ13275 785 aa6.41□□□□□ -1.38
MATR3-228ENST00000620916 ZKSCAN8Q15776 578 aaPredicted RBP6.41□□□□□ -1.38
MATR3-228ENST00000620916 RBM28Q9NW13 759 aaKnown RBP6.41□□□□□ -1.38
MATR3-228ENST00000620916 PIK3C2BO00750 1634 aa6.41□□□□□ -1.38
MATR3-228ENST00000620916 KCNA6P17658 529 aa6.41□□□□□ -1.38
MATR3-228ENST00000620916 MKL1Q969V6 931 aa6.41□□□□□ -1.38
MATR3-228ENST00000620916 CWC22Q9HCG8 908 aaKnown RBP6.41□□□□□ -1.38
MATR3-228ENST00000620916 EID1Q9Y6B2 187 aa6.41□□□□□ -1.38
MATR3-228ENST00000620916 HNRNPMP52272 730 aaKnown RBP eCLIP6.4□□□□□ -1.38
MATR3-228ENST00000620916 TERF2IPQ9NYB0 399 aa6.4□□□□□ -1.38
MATR3-228ENST00000620916 LMOD3Q0VAK6 560 aa6.4□□□□□ -1.39
MATR3-228ENST00000620916 NBPF6Q5VWK0 638 aa6.4□□□□□ -1.39
MATR3-228ENST00000620916 NBPF5PQ86XG9 351 aaPredicted RBP6.4□□□□□ -1.39
MATR3-228ENST00000620916 BANK1Q8NDB2 785 aa6.4□□□□□ -1.39
MATR3-228ENST00000620916 NBPF4Q96M43 638 aa6.4□□□□□ -1.39
MATR3-228ENST00000620916 ATP1B4Q9UN42 357 aaPredicted RBP6.4□□□□□ -1.39
MATR3-228ENST00000620916 AHDC1Q5TGY3 1603 aaPredicted RBP6.4□□□□□ -1.39
MATR3-228ENST00000620916 C1orf115Q9H7X2 142 aa6.39□□□□□ -1.39
MATR3-228ENST00000620916 CEP83Q9Y592 693 aa6.39□□□□□ -1.39
MATR3-228ENST00000620916 PHLPP1O60346 1717 aa6.39□□□□□ -1.39
MATR3-228ENST00000620916 RBM26Q5T8P6 1007 aaKnown RBP6.39□□□□□ -1.39
MATR3-228ENST00000620916 RAD50Q92878 1312 aa6.39□□□□□ -1.39
MATR3-228ENST00000620916 NINLQ9Y2I6 1382 aa6.39□□□□□ -1.39
MATR3-228ENST00000620916 HSP90AB4PQ58FF6 505 aa6.39□□□□□ -1.39
MATR3-228ENST00000620916 CCDC125Q86Z20 511 aa6.39□□□□□ -1.39
MATR3-228ENST00000620916 SETD1AO15047 1707 aaKnown RBP6.38□□□□□ -1.39
MATR3-228ENST00000620916 ZNF500O60304 480 aaPredicted RBP6.38□□□□□ -1.39
MATR3-228ENST00000620916 XRCC6P12956 609 aaKnown RBP eCLIP6.38□□□□□ -1.39
MATR3-228ENST00000620916 SSR1P43307 286 aaKnown RBP6.38□□□□□ -1.39
MATR3-228ENST00000620916 E2F4Q16254 413 aa6.38□□□□□ -1.39
MATR3-228ENST00000620916 COL16A1Q07092 1604 aaPredicted RBP6.38□□□□□ -1.39
MATR3-228ENST00000620916 E9PCH4 1651 aa6.38□□□□□ -1.39
MATR3-228ENST00000620916 MSH6P52701 1360 aa6.38□□□□□ -1.39
MATR3-228ENST00000620916 E9PSI1 815 aa6.38□□□□□ -1.39
MATR3-228ENST00000620916 KIF3BO15066 747 aa6.38□□□□□ -1.39
MATR3-228ENST00000620916 SETDB1Q15047 1291 aa6.38□□□□□ -1.39
MATR3-228ENST00000620916 CCDC27Q2M243 656 aa6.38□□□□□ -1.39
MATR3-228ENST00000620916 FBXO31Q5XUX0 539 aaPredicted RBP6.38□□□□□ -1.39
MATR3-228ENST00000620916 TSHZ1Q6ZSZ6 1077 aa6.38□□□□□ -1.39
MATR3-228ENST00000620916 MYCBPQ99417 103 aaPredicted RBP6.38□□□□□ -1.39
MATR3-228ENST00000620916 BACH2Q9BYV9 841 aa6.38□□□□□ -1.39
MATR3-228ENST00000620916 RNF123Q5XPI4 1314 aa6.38□□□□□ -1.39
MATR3-228ENST00000620916 TESPA1A2RU30 521 aaPredicted RBP6.37□□□□□ -1.39
MATR3-228ENST00000620916 CCDC66A2RUB6 948 aa6.37□□□□□ -1.39
MATR3-228ENST00000620916 CTR9Q6PD62 1173 aa6.37□□□□□ -1.39
MATR3-228ENST00000620916 TET3O43151 1660 aa6.37□□□□□ -1.39
MATR3-228ENST00000620916 KNDC1Q76NI1 1749 aa6.37□□□□□ -1.39
MATR3-228ENST00000620916 RXRBP28702 533 aa6.37□□□□□ -1.39
MATR3-228ENST00000620916 MRE11P49959 708 aa6.37□□□□□ -1.39
MATR3-228ENST00000620916 B4GALNT3Q6L9W6 998 aa6.37□□□□□ -1.39
MATR3-228ENST00000620916 ZNF777Q9ULD5 760 aaPredicted RBP6.37□□□□□ -1.39
MATR3-228ENST00000620916 TMEM94Q12767 1356 aa6.37□□□□□ -1.39
MATR3-228ENST00000620916 TMEM2Q9UHN6 1383 aa6.37□□□□□ -1.39
MATR3-228ENST00000620916 MLLT3P42568 568 aaPredicted RBP6.36□□□□□ -1.39
MATR3-228ENST00000620916 NCAPGQ9BPX3 1015 aa6.36□□□□□ -1.39
MATR3-228ENST00000620916 PHF8Q9UPP1 1060 aa6.36□□□□□ -1.39
MATR3-228ENST00000620916 KIF1CO43896 1103 aaKnown RBP6.36□□□□□ -1.39
MATR3-228ENST00000620916 ZMYND10O75800 440 aa6.36□□□□□ -1.39
MATR3-228ENST00000620916 CCDC172P0C7W6 258 aa6.36□□□□□ -1.39
MATR3-228ENST00000620916 MFAP1P55081 439 aaKnown RBP6.36□□□□□ -1.39
MATR3-228ENST00000620916 CCDC96Q2M329 555 aa6.36□□□□□ -1.39
MATR3-228ENST00000620916 KIF16BQ96L93 1317 aa6.36□□□□□ -1.39
MATR3-228ENST00000620916 PIK3R4Q99570 1358 aa6.36□□□□□ -1.39
MATR3-228ENST00000620916 DUOX2Q9NRD8 1548 aa6.36□□□□□ -1.39
MATR3-228ENST00000620916 USP32Q8NFA0 1604 aa6.36□□□□□ -1.39
MATR3-228ENST00000620916 GOLIM4O00461 696 aa6.36□□□□□ -1.39
MATR3-228ENST00000620916 NRDCO43847 1150 aa6.36□□□□□ -1.39
MATR3-228ENST00000620916 TXNDC2Q86VQ3 553 aa6.36□□□□□ -1.39
MATR3-228ENST00000620916 TMTC2Q8N394 836 aa6.36□□□□□ -1.39
MATR3-228ENST00000620916 EFCAB3Q8N7B9 438 aa6.36□□□□□ -1.39
MATR3-228ENST00000620916 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.36□□□□□ -1.396e-7■■■■■ 50.1
MATR3-228ENST00000620916 CGNQ9P2M7 1197 aaKnown RBP6.36□□□□□ -1.39
MATR3-228ENST00000620916 ERBB4Q15303 1308 aa6.36□□□□□ -1.39
MATR3-228ENST00000620916 HDGFP51858 240 aaKnown RBP6.35□□□□□ -1.39
MATR3-228ENST00000620916 BRMS1Q9HCU9 246 aa6.35□□□□□ -1.39
MATR3-228ENST00000620916 FAM13BQ9NYF5 915 aa6.35□□□□□ -1.39
MATR3-228ENST00000620916 KIF3AQ9Y496 699 aa6.35□□□□□ -1.39
MATR3-228ENST00000620916 MTA1Q13330 715 aa6.35□□□□□ -1.39
MATR3-228ENST00000620916 SPDYE1Q8NFV5 336 aaPredicted RBP6.35□□□□□ -1.39
MATR3-228ENST00000620916 ZNF526Q8TF50 670 aaPredicted RBP6.35□□□□□ -1.39
MATR3-228ENST00000620916 SGIP1Q9BQI5 828 aa6.35□□□□□ -1.39
MATR3-228ENST00000620916 RYDENQ9NUL5 291 aaKnown RBP6.35□□□□□ -1.39
MATR3-228ENST00000620916 SLAIN2Q9P270 581 aa6.35□□□□□ -1.39
MATR3-228ENST00000620916 DCCP43146 1447 aa6.35□□□□□ -1.39
MATR3-228ENST00000620916 SPHKAPQ2M3C7 1700 aa6.35□□□□□ -1.39
MATR3-228ENST00000620916 DIP2AQ14689 1571 aa6.34□□□□□ -1.39
MATR3-228ENST00000620916 EFCAB6Q5THR3 1501 aa6.34□□□□□ -1.39
MATR3-228ENST00000620916 MTUS2Q5JR59 1369 aa6.34□□□□□ -1.39
MATR3-228ENST00000620916 ATAD2Q6PL18 1390 aa6.34□□□□□ -1.39
MATR3-228ENST00000620916 FRAT2O75474 233 aaPredicted RBP6.34□□□□□ -1.39
MATR3-228ENST00000620916 TSPY4P0CV99 314 aa6.34□□□□□ -1.39
MATR3-228ENST00000620916 TSPY10P0CW01 314 aa6.34□□□□□ -1.39
MATR3-228ENST00000620916 ANKRD23Q86SG2 305 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms