RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 DTNBO60941 627 aa8.54□□□□□ -1.04
NEDD9-216ENST00000620854 ERCC6L2Q5T890 1561 aa8.53□□□□□ -1.04
NEDD9-216ENST00000620854 CSB-PGBD3P0DP91 1061 aa8.53□□□□□ -1.04
NEDD9-216ENST00000620854 RTF1Q92541 710 aaKnown RBP8.53□□□□□ -1.04
NEDD9-216ENST00000620854 PHACTR3Q96KR7 559 aa8.53□□□□□ -1.04
NEDD9-216ENST00000620854 GDPD2Q9HCC8 539 aa8.53□□□□□ -1.04
NEDD9-216ENST00000620854 NSFL1CQ9UNZ2 370 aaKnown RBP8.53□□□□□ -1.04
NEDD9-216ENST00000620854 FAM177BA6PVY3 158 aa8.53□□□□□ -1.04
NEDD9-216ENST00000620854 OFD1O75665 1012 aa8.53□□□□□ -1.04
NEDD9-216ENST00000620854 FAM83GA6ND36 823 aa8.53□□□□□ -1.04
NEDD9-216ENST00000620854 CDC45O75419 566 aa8.53□□□□□ -1.04
NEDD9-216ENST00000620854 TSHZ3Q63HK5 1081 aa8.53□□□□□ -1.04
NEDD9-216ENST00000620854 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.53□□□□□ -1.04
NEDD9-216ENST00000620854 ZNF830Q96NB3 372 aaPredicted RBP8.53□□□□□ -1.04
NEDD9-216ENST00000620854 PLEKHF1Q96S99 279 aa8.53□□□□□ -1.04
NEDD9-216ENST00000620854 CHMP4BQ9H444 224 aaKnown RBP8.53□□□□□ -1.04
NEDD9-216ENST00000620854 GSPT1P15170 499 aaKnown RBP8.52□□□□□ -1.05
NEDD9-216ENST00000620854 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.52□□□□□ -1.05
NEDD9-216ENST00000620854 TTC37Q6PGP7 1564 aa8.52□□□□□ -1.05
NEDD9-216ENST00000620854 FYB1O15117 783 aa8.52□□□□□ -1.05
NEDD9-216ENST00000620854 KRT24Q2M2I5 525 aa8.51□□□□□ -1.05
NEDD9-216ENST00000620854 LMBRD1Q9NUN5 540 aa8.51□□□□□ -1.05
NEDD9-216ENST00000620854 MADDQ8WXG6 1647 aa8.51□□□□□ -1.05
NEDD9-216ENST00000620854 GOLGA6L4A6NEF3 574 aa8.51□□□□□ -1.05
NEDD9-216ENST00000620854 GCC1Q96CN9 775 aa8.51□□□□□ -1.05
NEDD9-216ENST00000620854 PSME1Q06323 249 aa8.51□□□□□ -1.05
NEDD9-216ENST00000620854 GPT2Q8TD30 523 aa8.51□□□□□ -1.05
NEDD9-216ENST00000620854 LTV1Q96GA3 475 aaPredicted RBP8.51□□□□□ -1.05
NEDD9-216ENST00000620854 PPP1R9BQ96SB3 815 aa8.51□□□□□ -1.05
NEDD9-216ENST00000620854 BCL11BQ9C0K0 894 aaPredicted RBP8.51□□□□□ -1.05
NEDD9-216ENST00000620854 MAST1Q9Y2H9 1570 aa8.51□□□□□ -1.05
NEDD9-216ENST00000620854 VIRMAQ69YN4 1812 aaKnown RBP8.51□□□□□ -1.05
NEDD9-216ENST00000620854 VAMP4O75379 141 aa8.5□□□□□ -1.05
NEDD9-216ENST00000620854 CT47B1P0C2W7 299 aaPredicted RBP8.5□□□□□ -1.05
NEDD9-216ENST00000620854 ATF3P18847 181 aa8.5□□□□□ -1.05
NEDD9-216ENST00000620854 NEK4P51957 841 aa8.5□□□□□ -1.05
NEDD9-216ENST00000620854 TMEM63CQ9P1W3 806 aa8.5□□□□□ -1.05
NEDD9-216ENST00000620854 PPIP5K1Q6PFW1 1433 aa8.5□□□□□ -1.05
NEDD9-216ENST00000620854 NUCB2P80303 420 aa8.5□□□□□ -1.05
NEDD9-216ENST00000620854 SLC4A10Q6U841 1118 aa8.5□□□□□ -1.05
NEDD9-216ENST00000620854 PLEKHM2Q8IWE5 1019 aa8.5□□□□□ -1.05
NEDD9-216ENST00000620854 C8orf58Q8NAV2 365 aa8.5□□□□□ -1.05
NEDD9-216ENST00000620854 C14orf93Q9H972 538 aaKnown RBP8.5□□□□□ -1.05
NEDD9-216ENST00000620854 ZHX1Q9UKY1 873 aaPredicted RBP8.5□□□□□ -1.05
NEDD9-216ENST00000620854 KDM5AP29375 1690 aaKnown RBP8.5□□□□□ -1.05
NEDD9-216ENST00000620854 TWISTNBQ3B726 338 aaPredicted RBP8.5□□□□□ -1.05
NEDD9-216ENST00000620854 PROSER2Q86WR7 435 aaPredicted RBP8.5□□□□□ -1.05
NEDD9-216ENST00000620854 CABP1Q9NZU7 370 aa8.5□□□□□ -1.05
NEDD9-216ENST00000620854 C17orf53Q8N3J3 647 aaPredicted RBP8.49□□□□□ -1.05
NEDD9-216ENST00000620854 ATP7AQ04656 1500 aa8.49□□□□□ -1.05
NEDD9-216ENST00000620854 NEO1Q92859 1461 aa8.49□□□□□ -1.05
NEDD9-216ENST00000620854 ST18O60284 1047 aa8.49□□□□□ -1.05
NEDD9-216ENST00000620854 PTMSP20962 102 aa8.49□□□□□ -1.05
NEDD9-216ENST00000620854 RABEP1Q15276 862 aa8.49□□□□□ -1.05
NEDD9-216ENST00000620854 LARP6Q9BRS8 491 aaKnown RBP8.49□□□□□ -1.05
NEDD9-216ENST00000620854 LAMC1P11047 1609 aa8.49□□□□□ -1.05
NEDD9-216ENST00000620854 IQGAP3Q86VI3 1631 aa8.49□□□□□ -1.05
NEDD9-216ENST00000620854 SDSP20132 328 aa8.49□□□□□ -1.05
NEDD9-216ENST00000620854 CDK19Q9BWU1 502 aa8.49□□□□□ -1.05
NEDD9-216ENST00000620854 USP26Q9BXU7 913 aa8.49□□□□□ -1.05
NEDD9-216ENST00000620854 MBIPQ9NS73 344 aa8.49□□□□□ -1.05
NEDD9-216ENST00000620854 UNC13BO14795 1591 aa8.48□□□□□ -1.05
NEDD9-216ENST00000620854 MRPL50Q8N5N7 158 aaKnown RBP8.48□□□□□ -1.05
NEDD9-216ENST00000620854 MYOM1P52179 1685 aa8.48□□□□□ -1.05
NEDD9-216ENST00000620854 A0A0U1RQG5 324 aaPredicted RBP8.48□□□□□ -1.05
NEDD9-216ENST00000620854 UPF3BQ9BZI7 483 aaKnown RBP8.48□□□□□ -1.05
NEDD9-216ENST00000620854 NOL7Q9UMY1 257 aaKnown RBP8.48□□□□□ -1.05
NEDD9-216ENST00000620854 EMILIN1Q9Y6C2 1016 aa8.48□□□□□ -1.05
NEDD9-216ENST00000620854 ZMYM3Q14202 1370 aa8.48□□□□□ -1.05
NEDD9-216ENST00000620854 TNRQ92752 1358 aa8.48□□□□□ -1.05
NEDD9-216ENST00000620854 CLTCL1P53675 1640 aa8.48□□□□□ -1.05
NEDD9-216ENST00000620854 ZCCHC11Q5TAX3 1644 aaKnown RBP8.48□□□□□ -1.05
NEDD9-216ENST00000620854 NCOA3Q9Y6Q9 1424 aa8.48□□□□□ -1.05
NEDD9-216ENST00000620854 IQGAP1P46940 1657 aa8.48□□□□□ -1.05
NEDD9-216ENST00000620854 DRC7Q8IY82 874 aa8.48□□□□□ -1.05
NEDD9-216ENST00000620854 MIS18AQ9NYP9 233 aa8.48□□□□□ -1.05
NEDD9-216ENST00000620854 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.48□□□□□ -1.05
NEDD9-216ENST00000620854 INTS3Q68E01 1043 aaKnown RBP8.47□□□□□ -1.05
NEDD9-216ENST00000620854 RILPL2Q969X0 211 aa8.47□□□□□ -1.05
NEDD9-216ENST00000620854 ZRANB1Q9UGI0 708 aa8.47□□□□□ -1.05
NEDD9-216ENST00000620854 ZDHHC9Q9Y397 364 aa8.47□□□□□ -1.05
NEDD9-216ENST00000620854 PREX2Q70Z35 1606 aa8.47□□□□□ -1.05
NEDD9-216ENST00000620854 MCCP23508 829 aa8.47□□□□□ -1.05
NEDD9-216ENST00000620854 A0A1W2PP64 1363 aa8.47□□□□□ -1.05
NEDD9-216ENST00000620854 RRS1Q15050 365 aaKnown RBP8.47□□□□□ -1.05
NEDD9-216ENST00000620854 ALDH1L2Q3SY69 923 aa8.47□□□□□ -1.05
NEDD9-216ENST00000620854 AEBP2Q6ZN18 517 aaPredicted RBP8.47□□□□□ -1.05
NEDD9-216ENST00000620854 ZKSCAN5Q9Y2L8 839 aa8.47□□□□□ -1.05
NEDD9-216ENST00000620854 TRIM6-TRIM34B2RNG4 842 aa8.46□□□□□ -1.05
NEDD9-216ENST00000620854 ZNF445P59923 1031 aa8.46□□□□□ -1.05
NEDD9-216ENST00000620854 TTC22Q5TAA0 569 aa8.46□□□□□ -1.05
NEDD9-216ENST00000620854 NECTIN2Q92692 538 aa8.46□□□□□ -1.05
NEDD9-216ENST00000620854 IQSEC2Q5JU85 1478 aa8.46□□□□□ -1.05
NEDD9-216ENST00000620854 RNF17Q9BXT8 1623 aaKnown RBP8.46□□□□□ -1.05
NEDD9-216ENST00000620854 LMOD3Q0VAK6 560 aa8.46□□□□□ -1.06
NEDD9-216ENST00000620854 NLRP6P59044 892 aa8.46□□□□□ -1.06
NEDD9-216ENST00000620854 ABCC11Q96J66 1382 aa8.46□□□□□ -1.06
NEDD9-216ENST00000620854 TTC12Q9H892 705 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-216ENST00000620854 WAPLQ7Z5K2 1190 aa8.45□□□□□ -1.06
NEDD9-216ENST00000620854 ANO2Q9NQ90 1003 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms