RNA–Protein interactions for RNA: ENST00000620847.1

GDNF-208, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-208ENST00000620847 AATKQ6ZMQ8 1374 aa10.2□□□□□ -0.78
GDNF-208ENST00000620847 PIK3R4Q99570 1358 aa10.2□□□□□ -0.78
GDNF-208ENST00000620847 PTCH1Q13635 1447 aa10.19□□□□□ -0.78
GDNF-208ENST00000620847 IL13P35225 146 aa10.19□□□□□ -0.78
GDNF-208ENST00000620847 PKNOX2Q96KN3 472 aa10.19□□□□□ -0.78
GDNF-208ENST00000620847 C3P01024 1663 aa10.19□□□□□ -0.78
GDNF-208ENST00000620847 VAMP4O75379 141 aa10.19□□□□□ -0.78
GDNF-208ENST00000620847 WASLO00401 505 aaPredicted RBP10.19□□□□□ -0.78
GDNF-208ENST00000620847 ARHGAP45Q92619 1136 aa10.19□□□□□ -0.78
GDNF-208ENST00000620847 NAP1L5Q96NT1 182 aaPredicted RBP10.19□□□□□ -0.78
GDNF-208ENST00000620847 ITSN1Q15811 1721 aa10.18□□□□□ -0.78
GDNF-208ENST00000620847 HMOX1P09601 288 aa10.18□□□□□ -0.78
GDNF-208ENST00000620847 ZNF853P0CG23 659 aa10.18□□□□□ -0.78
GDNF-208ENST00000620847 CALD1Q05682 793 aaKnown RBP10.18□□□□□ -0.78
GDNF-208ENST00000620847 FAM69CQ0P6D2 419 aa10.18□□□□□ -0.78
GDNF-208ENST00000620847 MRPL50Q8N5N7 158 aaKnown RBP10.18□□□□□ -0.78
GDNF-208ENST00000620847 EMILIN1Q9Y6C2 1016 aa10.18□□□□□ -0.78
GDNF-208ENST00000620847 MFAP1P55081 439 aaKnown RBP10.18□□□□□ -0.78
GDNF-208ENST00000620847 IFT57Q9NWB7 429 aa10.18□□□□□ -0.78
GDNF-208ENST00000620847 ZBTB7BO15156 539 aaPredicted RBP10.18□□□□□ -0.78
GDNF-208ENST00000620847 METP08581 1390 aa10.17□□□□□ -0.78
GDNF-208ENST00000620847 GOLGA6L3A6NEY3 463 aa10.17□□□□□ -0.78
GDNF-208ENST00000620847 GNAI1P63096 354 aa10.17□□□□□ -0.78
GDNF-208ENST00000620847 NME9Q86XW9 330 aa10.17□□□□□ -0.78
GDNF-208ENST00000620847 CPS1P31327 1500 aa10.17□□□□□ -0.78
GDNF-208ENST00000620847 CHD1LQ86WJ1 897 aa10.17□□□□□ -0.78
GDNF-208ENST00000620847 THUMPD2Q9BTF0 503 aaKnown RBP10.17□□□□□ -0.78
GDNF-208ENST00000620847 TECPR2O15040 1411 aa10.16□□□□□ -0.78
GDNF-208ENST00000620847 TSPYL6Q8N831 410 aa10.16□□□□□ -0.78
GDNF-208ENST00000620847 NRKQ7Z2Y5 1582 aa10.16□□□□□ -0.78
GDNF-208ENST00000620847 MBIPQ9NS73 344 aa10.16□□□□□ -0.78
GDNF-208ENST00000620847 CHMP4BQ9H444 224 aaKnown RBP10.16□□□□□ -0.78
GDNF-208ENST00000620847 ZRANB1Q9UGI0 708 aa10.16□□□□□ -0.78
GDNF-208ENST00000620847 ABCC4O15439 1325 aa10.16□□□□□ -0.78
GDNF-208ENST00000620847 HSP90AA1P07900 732 aaKnown RBP10.15□□□□□ -0.78
GDNF-208ENST00000620847 SIRT1Q96EB6 747 aa10.15□□□□□ -0.78
GDNF-208ENST00000620847 RBM25P49756 843 aaKnown RBP10.15□□□□□ -0.78
GDNF-208ENST00000620847 HSP90AA2PQ14568 343 aaPredicted RBP10.15□□□□□ -0.78
GDNF-208ENST00000620847 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.15□□□□□ -0.78
GDNF-208ENST00000620847 GCC1Q96CN9 775 aa10.15□□□□□ -0.78
GDNF-208ENST00000620847 NUDT16Q96DE0 195 aaKnown RBP10.15□□□□□ -0.78
GDNF-208ENST00000620847 LNPKQ9C0E8 428 aa10.15□□□□□ -0.78
GDNF-208ENST00000620847 CFAP44Q96MT7 982 aa10.15□□□□□ -0.79
GDNF-208ENST00000620847 ARXQ96QS3 562 aa10.15□□□□□ -0.79
GDNF-208ENST00000620847 CLCN1P35523 988 aa10.14□□□□□ -0.79
GDNF-208ENST00000620847 BMP2KLQ5H9B9 411 aa10.14□□□□□ -0.79
GDNF-208ENST00000620847 LMOD3Q0VAK6 560 aa10.14□□□□□ -0.79
GDNF-208ENST00000620847 COG3Q96JB2 828 aa10.14□□□□□ -0.79
GDNF-208ENST00000620847 NCOA3Q9Y6Q9 1424 aa10.14□□□□□ -0.79
GDNF-208ENST00000620847 TXNDC2Q86VQ3 553 aa10.14□□□□□ -0.79
GDNF-208ENST00000620847 VSIG10Q8N0Z9 540 aa10.14□□□□□ -0.79
GDNF-208ENST00000620847 CCDC61Q9Y6R9 512 aa10.14□□□□□ -0.79
GDNF-208ENST00000620847 RRP9O43818 475 aaKnown RBP10.13□□□□□ -0.79
GDNF-208ENST00000620847 XRCC6P12956 609 aaKnown RBP eCLIP10.13□□□□□ -0.79
GDNF-208ENST00000620847 TWISTNBQ3B726 338 aaPredicted RBP10.13□□□□□ -0.79
GDNF-208ENST00000620847 NCKAP5LQ9HCH0 1330 aa10.13□□□□□ -0.79
GDNF-208ENST00000620847 SIRT2Q8IXJ6 389 aa10.13□□□□□ -0.79
GDNF-208ENST00000620847 SPRYD3Q8NCJ5 442 aa10.13□□□□□ -0.79
GDNF-208ENST00000620847 CHMP5Q9NZZ3 219 aa10.13□□□□□ -0.79
GDNF-208ENST00000620847 RRS1Q15050 365 aaKnown RBP10.13□□□□□ -0.79
GDNF-208ENST00000620847 C8orf58Q8NAV2 365 aa10.13□□□□□ -0.79
GDNF-208ENST00000620847 TOPAZ1Q8N9V7 1692 aa10.13□□□□□ -0.79
GDNF-208ENST00000620847 C1orf115Q9H7X2 142 aa10.12□□□□□ -0.79
GDNF-208ENST00000620847 ELL2O00472 640 aaPredicted RBP10.12□□□□□ -0.79
GDNF-208ENST00000620847 MLECQ14165 292 aa10.12□□□□□ -0.79
GDNF-208ENST00000620847 ANKRD45Q5TZF3 282 aa10.12□□□□□ -0.79
GDNF-208ENST00000620847 SNX21Q969T3 373 aa10.12□□□□□ -0.79
GDNF-208ENST00000620847 ZNF692Q9BU19 519 aaPredicted RBP10.12□□□□□ -0.79
GDNF-208ENST00000620847 UBR1Q8IWV7 1749 aa10.12□□□□□ -0.79
GDNF-208ENST00000620847 KIF24Q5T7B8 1368 aa10.12□□□□□ -0.79
GDNF-208ENST00000620847 MCM4P33991 863 aa10.12□□□□□ -0.79
GDNF-208ENST00000620847 HSCBQ8IWL3 235 aa10.12□□□□□ -0.79
GDNF-208ENST00000620847 PRR36Q9H6K5 1346 aa10.11□□□□□ -0.79
GDNF-208ENST00000620847 NALCNQ8IZF0 1738 aa10.11□□□□□ -0.79
GDNF-208ENST00000620847 DDIT3P35638 169 aa10.11□□□□□ -0.79
GDNF-208ENST00000620847 FAM83GA6ND36 823 aa10.11□□□□□ -0.79
GDNF-208ENST00000620847 API5Q9BZZ5 524 aaKnown RBP10.11□□□□□ -0.79
GDNF-208ENST00000620847 RGPD1P0DJD0 1748 aa10.11□□□□□ -0.79
GDNF-208ENST00000620847 FSD2A1L4K1 749 aa10.11□□□□□ -0.79
GDNF-208ENST00000620847 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.11□□□□□ -0.79
GDNF-208ENST00000620847 MRE11P49959 708 aa10.1□□□□□ -0.79
GDNF-208ENST00000620847 GZF1Q9H116 711 aaPredicted RBP10.1□□□□□ -0.79
GDNF-208ENST00000620847 KIF2CQ99661 725 aa10.1□□□□□ -0.79
GDNF-208ENST00000620847 ZMYND15Q9H091 742 aa10.1□□□□□ -0.79
GDNF-208ENST00000620847 PEAK1Q9H792 1746 aa10.09□□□□□ -0.79
GDNF-208ENST00000620847 HDGFP51858 240 aaKnown RBP10.09□□□□□ -0.79
GDNF-208ENST00000620847 DCTN1Q14203 1278 aa10.09□□□□□ -0.79
GDNF-208ENST00000620847 ROBO2Q9HCK4 1378 aa10.09□□□□□ -0.79
GDNF-208ENST00000620847 OVOS2A0A0J9YW53 1432 aa10.09□□□□□ -0.79
GDNF-208ENST00000620847 OVOS2Q6IE36 1432 aa10.09□□□□□ -0.79
GDNF-208ENST00000620847 EIF4A2Q14240 407 aaKnown RBP10.08□□□□□ -0.8
GDNF-208ENST00000620847 KIF13AQ9H1H9 1805 aa10.08□□□□□ -0.8
GDNF-208ENST00000620847 TMEM2Q9UHN6 1383 aa10.08□□□□□ -0.8
GDNF-208ENST00000620847 INTS3Q68E01 1043 aaKnown RBP10.08□□□□□ -0.8
GDNF-208ENST00000620847 TBC1D9Q6ZT07 1266 aa10.08□□□□□ -0.8
GDNF-208ENST00000620847 RGS12O14924 1447 aa10.08□□□□□ -0.8
GDNF-208ENST00000620847 ADAMTS13Q76LX8 1427 aa10.08□□□□□ -0.8
GDNF-208ENST00000620847 TRAK2O60296 914 aa10.08□□□□□ -0.8
GDNF-208ENST00000620847 TNRQ92752 1358 aa10.07□□□□□ -0.8
GDNF-208ENST00000620847 AEBP1Q8IUX7 1158 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms