RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 INSRP06213 1382 aa10.76□□□□□ -0.69
CPNE3-209ENST00000620393 PNPLA6Q8IY17 1366 aa10.76□□□□□ -0.69
CPNE3-209ENST00000620393 PLEKHG5O94827 1062 aa10.75□□□□□ -0.69
CPNE3-209ENST00000620393 AMPHP49418 695 aa10.75□□□□□ -0.69
CPNE3-209ENST00000620393 ARHGEF25Q86VW2 580 aa10.75□□□□□ -0.69
CPNE3-209ENST00000620393 CABLES1Q8TDN4 633 aa10.75□□□□□ -0.69
CPNE3-209ENST00000620393 MAP3K19Q56UN5 1328 aa10.75□□□□□ -0.69
CPNE3-209ENST00000620393 NRKQ7Z2Y5 1582 aa10.74□□□□□ -0.69
CPNE3-209ENST00000620393 FAM9BQ8IZU0 186 aa10.74□□□□□ -0.69
CPNE3-209ENST00000620393 DIAPH1O60610 1272 aaKnown RBP10.73□□□□□ -0.69
CPNE3-209ENST00000620393 FXR2P51116 673 aaKnown RBP eCLIP10.73□□□□□ -0.69
CPNE3-209ENST00000620393 ZC3H6P61129 1189 aaKnown RBP10.73□□□□□ -0.69
CPNE3-209ENST00000620393 HSP90AB2PQ58FF8 381 aa10.73□□□□□ -0.69
CPNE3-209ENST00000620393 IP6K1Q92551 441 aa10.73□□□□□ -0.69
CPNE3-209ENST00000620393 NUDCQ9Y266 331 aa10.73□□□□□ -0.69
CPNE3-209ENST00000620393 IL13P35225 146 aa10.72□□□□□ -0.69
CPNE3-209ENST00000620393 ADAMTS8Q9UP79 889 aa10.72□□□□□ -0.69
CPNE3-209ENST00000620393 KIF24Q5T7B8 1368 aa10.72□□□□□ -0.69
CPNE3-209ENST00000620393 PIK3C2AO00443 1686 aa10.71□□□□□ -0.69
CPNE3-209ENST00000620393 HOXC9P31274 260 aa10.71□□□□□ -0.69
CPNE3-209ENST00000620393 HAP1P54257 671 aaPredicted RBP10.71□□□□□ -0.69
CPNE3-209ENST00000620393 WDR43Q15061 677 aaKnown RBP eCLIP10.71□□□□□ -0.69
CPNE3-209ENST00000620393 AHDC1Q5TGY3 1603 aaPredicted RBP10.71□□□□□ -0.69
CPNE3-209ENST00000620393 SMG6Q86US8 1419 aaKnown RBP10.71□□□□□ -0.69
CPNE3-209ENST00000620393 TRPM3Q9HCF6 1732 aaPredicted RBP10.71□□□□□ -0.69
CPNE3-209ENST00000620393 ROBO1Q9Y6N7 1651 aa10.7□□□□□ -0.7
CPNE3-209ENST00000620393 FLT4P35916 1363 aa10.7□□□□□ -0.7
CPNE3-209ENST00000620393 ZBTB7CA1YPR0 619 aa10.7□□□□□ -0.7
CPNE3-209ENST00000620393 HSPA1LP34931 641 aa10.7□□□□□ -0.7
CPNE3-209ENST00000620393 EIF4A2Q14240 407 aaKnown RBP10.7□□□□□ -0.7
CPNE3-209ENST00000620393 SLIT3O75094 1523 aa10.69□□□□□ -0.7
CPNE3-209ENST00000620393 CPDO75976 1380 aa10.69□□□□□ -0.7
CPNE3-209ENST00000620393 U2AF1L5P0DN76 240 aaPredicted RBP10.69□□□□□ -0.7
CPNE3-209ENST00000620393 U2AF1Q01081 240 aaKnown RBP eCLIP10.69□□□□□ -0.7
CPNE3-209ENST00000620393 AXIN2Q9Y2T1 843 aa10.69□□□□□ -0.7
CPNE3-209ENST00000620393 KIF20BQ96Q89 1820 aa10.69□□□□□ -0.7
CPNE3-209ENST00000620393 NHSL1Q5SYE7 1610 aa10.69□□□□□ -0.7
CPNE3-209ENST00000620393 FAM83GA6ND36 823 aa10.68□□□□□ -0.7
CPNE3-209ENST00000620393 U2SURPO15042 1029 aaKnown RBP10.68□□□□□ -0.7
CPNE3-209ENST00000620393 MED1Q15648 1581 aaPredicted RBP10.68□□□□□ -0.7
CPNE3-209ENST00000620393 CDK12Q9NYV4 1490 aaPredicted RBP10.68□□□□□ -0.7
CPNE3-209ENST00000620393 RTL1A6NKG5 1358 aa10.67□□□□□ -0.7
CPNE3-209ENST00000620393 KIAA0232Q92628 1395 aa10.67□□□□□ -0.7
CPNE3-209ENST00000620393 JCADQ9P266 1359 aa10.67□□□□□ -0.7
CPNE3-209ENST00000620393 ALS2Q96Q42 1657 aa10.67□□□□□ -0.7
CPNE3-209ENST00000620393 FCHSD2O94868 740 aa10.67□□□□□ -0.7
CPNE3-209ENST00000620393 CHRNA2Q15822 529 aa10.67□□□□□ -0.7
CPNE3-209ENST00000620393 LTV1Q96GA3 475 aaPredicted RBP10.67□□□□□ -0.7
CPNE3-209ENST00000620393 PNNQ9H307 717 aaKnown RBP10.67□□□□□ -0.7
CPNE3-209ENST00000620393 PRDM11Q9NQV5 511 aa10.67□□□□□ -0.7
CPNE3-209ENST00000620393 NFAT5O94916 1531 aa10.67□□□□□ -0.7
CPNE3-209ENST00000620393 ANKRD26Q9UPS8 1709 aa10.67□□□□□ -0.7
CPNE3-209ENST00000620393 USP54Q70EL1 1684 aa10.66□□□□□ -0.7
CPNE3-209ENST00000620393 ANKRD24Q8TF21 1146 aa10.66□□□□□ -0.7
CPNE3-209ENST00000620393 EYA1Q99502 592 aa10.66□□□□□ -0.7
CPNE3-209ENST00000620393 COL3A1P02461 1466 aaPredicted RBP10.66□□□□□ -0.7
CPNE3-209ENST00000620393 NUTM2BA6NNL0 878 aaPredicted RBP10.65□□□□□ -0.7
CPNE3-209ENST00000620393 NUTM2EB1AL46 878 aaPredicted RBP10.65□□□□□ -0.7
CPNE3-209ENST00000620393 NUTM2AQ8IVF1 878 aaPredicted RBP10.65□□□□□ -0.7
CPNE3-209ENST00000620393 RUNDC1Q96C34 613 aa10.65□□□□□ -0.7
CPNE3-209ENST00000620393 NBPF6Q5VWK0 638 aa10.64□□□□□ -0.71
CPNE3-209ENST00000620393 SULT6B1Q6IMI4 303 aa10.64□□□□□ -0.71
CPNE3-209ENST00000620393 NBPF4Q96M43 638 aa10.64□□□□□ -0.71
CPNE3-209ENST00000620393 YTHDC1Q96MU7 727 aaKnown RBP10.64□□□□□ -0.71
CPNE3-209ENST00000620393 PLEKHF1Q96S99 279 aa10.64□□□□□ -0.71
CPNE3-209ENST00000620393 RSPH6AQ9H0K4 717 aa10.64□□□□□ -0.71
CPNE3-209ENST00000620393 BLMP54132 1417 aaPredicted RBP10.64□□□□□ -0.71
CPNE3-209ENST00000620393 SPATA31A6Q5VVP1 1343 aa10.63□□□□□ -0.71
CPNE3-209ENST00000620393 COL16A1Q07092 1604 aaPredicted RBP10.63□□□□□ -0.71
CPNE3-209ENST00000620393 ADAMTS2O95450 1211 aa10.63□□□□□ -0.71
CPNE3-209ENST00000620393 HMOX1P09601 288 aa10.63□□□□□ -0.71
CPNE3-209ENST00000620393 EVA1CP58658 441 aa10.63□□□□□ -0.71
CPNE3-209ENST00000620393 HNRNPUQ00839 825 aaKnown RBP eCLIP10.63□□□□□ -0.71
CPNE3-209ENST00000620393 CCDC146Q8IYE0 955 aa10.63□□□□□ -0.71
CPNE3-209ENST00000620393 FBXO41Q8TF61 875 aa10.63□□□□□ -0.71
CPNE3-209ENST00000620393 MARF1Q9Y4F3 1742 aaKnown RBP10.63□□□□□ -0.71
CPNE3-209ENST00000620393 ERBB3P21860 1342 aa10.62□□□□□ -0.71
CPNE3-209ENST00000620393 IGSF1Q8N6C5 1336 aa10.62□□□□□ -0.71
CPNE3-209ENST00000620393 PHLPP1O60346 1717 aa10.62□□□□□ -0.71
CPNE3-209ENST00000620393 SPDYE4A6NLX3 237 aa10.62□□□□□ -0.71
CPNE3-209ENST00000620393 APAF1O14727 1248 aa10.62□□□□□ -0.71
CPNE3-209ENST00000620393 PRR29P0C7W0 189 aa10.62□□□□□ -0.71
CPNE3-209ENST00000620393 CSB-PGBD3P0DP91 1061 aa10.62□□□□□ -0.71
CPNE3-209ENST00000620393 PRKAR2BP31323 418 aa10.62□□□□□ -0.71
CPNE3-209ENST00000620393 AEBP1Q8IUX7 1158 aa10.62□□□□□ -0.71
CPNE3-209ENST00000620393 MAP2P11137 1827 aaKnown RBP10.62□□□□□ -0.71
CPNE3-209ENST00000620393 NEFMP07197 916 aa10.61□□□□□ -0.71
CPNE3-209ENST00000620393 TCP11L2Q8N4U5 519 aa10.61□□□□□ -0.71
CPNE3-209ENST00000620393 NGEFQ8N5V2 710 aa10.61□□□□□ -0.71
CPNE3-209ENST00000620393 NLRP2Q9NX02 1062 aa10.61□□□□□ -0.71
CPNE3-209ENST00000620393 BTG4Q9NY30 223 aa10.61□□□□□ -0.71
CPNE3-209ENST00000620393 PEAK1Q9H792 1746 aa10.61□□□□□ -0.71
CPNE3-209ENST00000620393 PRKAR2AP13861 404 aaKnown RBP10.6□□□□□ -0.71
CPNE3-209ENST00000620393 PHACTR3Q96KR7 559 aa10.6□□□□□ -0.71
CPNE3-209ENST00000620393 WDR17Q8IZU2 1322 aa10.59□□□□□ -0.71
CPNE3-209ENST00000620393 LARP1Q6PKG0 1096 aaKnown RBP10.59□□□□□ -0.71
CPNE3-209ENST00000620393 TOM1L2Q6ZVM7 507 aa10.59□□□□□ -0.71
CPNE3-209ENST00000620393 USHBP1Q8N6Y0 703 aa10.59□□□□□ -0.71
CPNE3-209ENST00000620393 NGLY1Q96IV0 654 aa10.59□□□□□ -0.71
CPNE3-209ENST00000620393 CARD10Q9BWT7 1032 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms