RNA–Protein interactions for RNA: ENST00000619939.4

LHX1-204, Transcript of LIM homeobox 1, humanhuman

TSL 2

Gene LHX1, Length 1,840 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-204ENST00000619939 TRPM3Q9HCF6 1732 aaPredicted RBP20.26■□□□□ 0.83
LHX1-204ENST00000619939 ABTB2Q8N961 1025 aa20.26■□□□□ 0.83
LHX1-204ENST00000619939 ABCA3Q99758 1704 aa20.26■□□□□ 0.83
LHX1-204ENST00000619939 WDR43Q15061 677 aaKnown RBP eCLIP20.25■□□□□ 0.83
LHX1-204ENST00000619939 OVOS2A0A0J9YW53 1432 aa20.25■□□□□ 0.83
LHX1-204ENST00000619939 OVOS2Q6IE36 1432 aa20.25■□□□□ 0.83
LHX1-204ENST00000619939 PLCH1Q4KWH8 1693 aa20.25■□□□□ 0.83
LHX1-204ENST00000619939 NLRP6P59044 892 aa20.25■□□□□ 0.83
LHX1-204ENST00000619939 ALS2Q96Q42 1657 aa20.25■□□□□ 0.83
LHX1-204ENST00000619939 PIK3C2AO00443 1686 aa20.24■□□□□ 0.83
LHX1-204ENST00000619939 CENPBP07199 599 aaPredicted RBP20.23■□□□□ 0.83
LHX1-204ENST00000619939 HNRNPUQ00839 825 aaKnown RBP eCLIP20.23■□□□□ 0.83
LHX1-204ENST00000619939 KRT27Q7Z3Y8 459 aa20.23■□□□□ 0.83
LHX1-204ENST00000619939 USP31Q70CQ4 1352 aa20.23■□□□□ 0.83
LHX1-204ENST00000619939 COL14A1Q05707 1796 aaKnown RBP20.23■□□□□ 0.83
LHX1-204ENST00000619939 MAP2P11137 1827 aaKnown RBP20.23■□□□□ 0.83
LHX1-204ENST00000619939 PLEKHG5O94827 1062 aa20.23■□□□□ 0.83
LHX1-204ENST00000619939 FBLN1P23142 703 aa20.23■□□□□ 0.83
LHX1-204ENST00000619939 BTG4Q9NY30 223 aa20.23■□□□□ 0.83
LHX1-204ENST00000619939 AATKQ6ZMQ8 1374 aa20.23■□□□□ 0.83
LHX1-204ENST00000619939 NUTM2GQ5VZR2 741 aa20.22■□□□□ 0.83
LHX1-204ENST00000619939 PPM1GO15355 546 aaPredicted RBP20.21■□□□□ 0.83
LHX1-204ENST00000619939 POLKQ9UBT6 870 aa20.2■□□□□ 0.82
LHX1-204ENST00000619939 SOX12O15370 315 aa20.2■□□□□ 0.82
LHX1-204ENST00000619939 PRDM11Q9NQV5 511 aa20.19■□□□□ 0.82
LHX1-204ENST00000619939 RRS1Q15050 365 aaKnown RBP20.18■□□□□ 0.82
LHX1-204ENST00000619939 EMILIN1Q9Y6C2 1016 aa20.18■□□□□ 0.82
LHX1-204ENST00000619939 BRWD3Q6RI45 1802 aa20.18■□□□□ 0.82
LHX1-204ENST00000619939 ADAMTS8Q9UP79 889 aa20.18■□□□□ 0.82
LHX1-204ENST00000619939 A0A0G2JS52 829 aa20.17■□□□□ 0.82
LHX1-204ENST00000619939 SPATA31A5Q5VU36 1347 aa20.17■□□□□ 0.82
LHX1-204ENST00000619939 SPATA31A7Q8IWB4 1347 aa20.17■□□□□ 0.82
LHX1-204ENST00000619939 USP54Q70EL1 1684 aa20.17■□□□□ 0.82
LHX1-204ENST00000619939 NRAPQ86VF7 1730 aa20.16■□□□□ 0.82
LHX1-204ENST00000619939 FAM98CQ17RN3 349 aaKnown RBP20.16■□□□□ 0.82
LHX1-204ENST00000619939 NUDCQ9Y266 331 aa20.16■□□□□ 0.82
LHX1-204ENST00000619939 SMG6Q86US8 1419 aaKnown RBP20.15■□□□□ 0.82
LHX1-204ENST00000619939 DIAPH1O60610 1272 aaKnown RBP20.13■□□□□ 0.81
LHX1-204ENST00000619939 BAG6P46379 1132 aa20.13■□□□□ 0.81
LHX1-204ENST00000619939 INSRP06213 1382 aa20.13■□□□□ 0.81
LHX1-204ENST00000619939 CRYBG1Q9Y4K1 1723 aa20.12■□□□□ 0.81
LHX1-204ENST00000619939 COL3A1P02461 1466 aaPredicted RBP20.12■□□□□ 0.81
LHX1-204ENST00000619939 KCNH5Q8NCM2 988 aa20.11■□□□□ 0.81
LHX1-204ENST00000619939 KIAA0232Q92628 1395 aa20.11■□□□□ 0.81
LHX1-204ENST00000619939 U2SURPO15042 1029 aaKnown RBP20.11■□□□□ 0.81
LHX1-204ENST00000619939 EP400Q96L91 3159 aa20.1■□□□□ 0.81
LHX1-204ENST00000619939 MAP3K19Q56UN5 1328 aa20.1■□□□□ 0.81
LHX1-204ENST00000619939 U2AF1L5P0DN76 240 aaPredicted RBP20.1■□□□□ 0.81
LHX1-204ENST00000619939 U2AF1Q01081 240 aaKnown RBP eCLIP20.1■□□□□ 0.81
LHX1-204ENST00000619939 AMPHP49418 695 aa20.09■□□□□ 0.81
LHX1-204ENST00000619939 DEFB132Q7Z7B7 95 aa20.09■□□□□ 0.81
LHX1-204ENST00000619939 SPATA31A1Q5TZJ5 1347 aa20.09■□□□□ 0.81
LHX1-204ENST00000619939 SENP3-EIF4A1A0A087X0R7 540 aa20.09■□□□□ 0.81
LHX1-204ENST00000619939 EVA1CP58658 441 aa20.09■□□□□ 0.81
LHX1-204ENST00000619939 ZBED9Q6R2W3 1325 aa20.08■□□□□ 0.81
LHX1-204ENST00000619939 CPDO75976 1380 aa20.08■□□□□ 0.8
LHX1-204ENST00000619939 ZC3H6P61129 1189 aaKnown RBP20.07■□□□□ 0.8
LHX1-204ENST00000619939 CCDC146Q8IYE0 955 aa20.07■□□□□ 0.8
LHX1-204ENST00000619939 FLT4P35916 1363 aa20.07■□□□□ 0.8
LHX1-204ENST00000619939 USP19O94966 1318 aa20.07■□□□□ 0.8
LHX1-204ENST00000619939 GCP02774 474 aa20.06■□□□□ 0.8
LHX1-204ENST00000619939 PHRF1Q9P1Y6 1649 aaKnown RBP20.06■□□□□ 0.8
LHX1-204ENST00000619939 PEAK1Q9H792 1746 aa20.06■□□□□ 0.8
LHX1-204ENST00000619939 SLIT3O75094 1523 aa20.06■□□□□ 0.8
LHX1-204ENST00000619939 BARGINQ6ZT62 677 aa20.06■□□□□ 0.8
LHX1-204ENST00000619939 CHRNA2Q15822 529 aa20.05■□□□□ 0.8
LHX1-204ENST00000619939 FAM196AQ6ZSG2 479 aa20.05■□□□□ 0.8
LHX1-204ENST00000619939 NFAT5O94916 1531 aa20.05■□□□□ 0.8
LHX1-204ENST00000619939 ZBTB7CA1YPR0 619 aa20.04■□□□□ 0.8
LHX1-204ENST00000619939 IL13P35225 146 aa20.04■□□□□ 0.8
LHX1-204ENST00000619939 HSP90AB2PQ58FF8 381 aa20.04■□□□□ 0.8
LHX1-204ENST00000619939 STRN4Q9NRL3 753 aa20.04■□□□□ 0.8
LHX1-204ENST00000619939 SALL2Q9Y467 1007 aaPredicted RBP20.04■□□□□ 0.8
LHX1-204ENST00000619939 KIF24Q5T7B8 1368 aa20.04■□□□□ 0.8
LHX1-204ENST00000619939 THSD7AQ9UPZ6 1657 aa20.04■□□□□ 0.8
LHX1-204ENST00000619939 LTN1O94822 1766 aa20.04■□□□□ 0.8
LHX1-204ENST00000619939 THRAP3Q9Y2W1 955 aaKnown RBP20.04■□□□□ 0.8
LHX1-204ENST00000619939 RGPD1P0DJD0 1748 aa20.03■□□□□ 0.8
LHX1-204ENST00000619939 RUNDC1Q96C34 613 aa20.02■□□□□ 0.8
LHX1-204ENST00000619939 RTL1A6NKG5 1358 aa20.02■□□□□ 0.8
LHX1-204ENST00000619939 HOXC9P31274 260 aa20.02■□□□□ 0.79
LHX1-204ENST00000619939 EIF4A2Q14240 407 aaKnown RBP20.02■□□□□ 0.79
LHX1-204ENST00000619939 DISP2A7MBM2 1401 aa20.02■□□□□ 0.79
LHX1-204ENST00000619939 PNNQ9H307 717 aaKnown RBP20.01■□□□□ 0.79
LHX1-204ENST00000619939 PDE3BQ13370 1112 aa20■□□□□ 0.79
LHX1-204ENST00000619939 TCP11L2Q8N4U5 519 aa20■□□□□ 0.79
LHX1-204ENST00000619939 APAF1O14727 1248 aa19.99■□□□□ 0.79
LHX1-204ENST00000619939 ARHGEF25Q86VW2 580 aa19.99■□□□□ 0.79
LHX1-204ENST00000619939 IP6K1Q92551 441 aa19.99■□□□□ 0.79
LHX1-204ENST00000619939 FCHSD2O94868 740 aa19.98■□□□□ 0.79
LHX1-204ENST00000619939 HMOX1P09601 288 aa19.98■□□□□ 0.79
LHX1-204ENST00000619939 NEFMP07197 916 aa19.97■□□□□ 0.79
LHX1-204ENST00000619939 MAPK8IP3Q9UPT6 1336 aa19.97■□□□□ 0.79
LHX1-204ENST00000619939 CAMTA1Q9Y6Y1 1673 aa19.97■□□□□ 0.79
LHX1-204ENST00000619939 EN1Q05925 392 aaPredicted RBP19.97■□□□□ 0.79
LHX1-204ENST00000619939 LARP1Q6PKG0 1096 aaKnown RBP19.96■□□□□ 0.79
LHX1-204ENST00000619939 LTV1Q96GA3 475 aaPredicted RBP19.96■□□□□ 0.79
LHX1-204ENST00000619939 USP35Q9P2H5 1018 aa19.95■□□□□ 0.78
LHX1-204ENST00000619939 LMO7Q8WWI1 1683 aa19.95■□□□□ 0.78
LHX1-204ENST00000619939 PRKAR2BP31323 418 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms