RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 AEBP1Q8IUX7 1158 aa26.09■■□□□ 1.77
MMP28-207ENST00000619655 RBM19Q9Y4C8 960 aaKnown RBP26.09■■□□□ 1.77
MMP28-207ENST00000619655 LAS1LQ9Y4W2 734 aaKnown RBP26.09■■□□□ 1.77
MMP28-207ENST00000619655 EXOSC9Q06265 439 aaKnown RBP26.09■■□□□ 1.77
MMP28-207ENST00000619655 SULT6B1Q6IMI4 303 aa26.09■■□□□ 1.77
MMP28-207ENST00000619655 THUMPD2Q9BTF0 503 aaKnown RBP26.08■■□□□ 1.77
MMP28-207ENST00000619655 AMPHP49418 695 aa26.06■■□□□ 1.76
MMP28-207ENST00000619655 PROSER2Q86WR7 435 aaPredicted RBP26.06■■□□□ 1.76
MMP28-207ENST00000619655 IL16Q14005 1332 aa26.05■■□□□ 1.76
MMP28-207ENST00000619655 PANK1Q8TE04 598 aa26.04■■□□□ 1.76
MMP28-207ENST00000619655 PSME1Q06323 249 aa26.04■■□□□ 1.76
MMP28-207ENST00000619655 FLT4P35916 1363 aa26.03■■□□□ 1.76
MMP28-207ENST00000619655 SBNO1A3KN83 1393 aa26.02■■□□□ 1.76
MMP28-207ENST00000619655 DLG5Q8TDM6 1919 aa26.02■■□□□ 1.76
MMP28-207ENST00000619655 HSPA2P54652 639 aa26.02■■□□□ 1.76
MMP28-207ENST00000619655 ORAI2Q96SN7 254 aa26.02■■□□□ 1.76
MMP28-207ENST00000619655 NWD1Q149M9 1564 aa26.01■■□□□ 1.75
MMP28-207ENST00000619655 COG6Q9Y2V7 657 aa26.01■■□□□ 1.75
MMP28-207ENST00000619655 FAM83GA6ND36 823 aa26■■□□□ 1.75
MMP28-207ENST00000619655 XPCQ01831 940 aaPredicted RBP26■■□□□ 1.75
MMP28-207ENST00000619655 PDE3AQ14432 1141 aa26■■□□□ 1.75
MMP28-207ENST00000619655 MARF1Q9Y4F3 1742 aaKnown RBP25.99■■□□□ 1.75
MMP28-207ENST00000619655 PLEKHG5O94827 1062 aa25.99■■□□□ 1.75
MMP28-207ENST00000619655 TNNQ9UQP3 1299 aa25.99■■□□□ 1.75
MMP28-207ENST00000619655 DCTN1Q14203 1278 aa25.98■■□□□ 1.75
MMP28-207ENST00000619655 CLUAP1Q96AJ1 413 aa25.98■■□□□ 1.75
MMP28-207ENST00000619655 SMC4Q9NTJ3 1288 aa25.98■■□□□ 1.75
MMP28-207ENST00000619655 FOXO3O43524 673 aa25.97■■□□□ 1.75
MMP28-207ENST00000619655 CT47B1P0C2W7 299 aaPredicted RBP25.97■■□□□ 1.75
MMP28-207ENST00000619655 LMOD3Q0VAK6 560 aa25.96■■□□□ 1.75
MMP28-207ENST00000619655 RGPD1P0DJD0 1748 aa25.96■■□□□ 1.75
MMP28-207ENST00000619655 CALD1Q05682 793 aaKnown RBP25.96■■□□□ 1.75
MMP28-207ENST00000619655 SSH1Q8WYL5 1049 aa25.94■■□□□ 1.74
MMP28-207ENST00000619655 RLBP1P12271 317 aa25.94■■□□□ 1.74
MMP28-207ENST00000619655 SKAP1Q86WV1 359 aa25.94■■□□□ 1.74
MMP28-207ENST00000619655 LTV1Q96GA3 475 aaPredicted RBP25.94■■□□□ 1.74
MMP28-207ENST00000619655 ZBTB7CA1YPR0 619 aa25.93■■□□□ 1.74
MMP28-207ENST00000619655 HOXC9P31274 260 aa25.93■■□□□ 1.74
MMP28-207ENST00000619655 LMOD2Q6P5Q4 547 aa25.93■■□□□ 1.74
MMP28-207ENST00000619655 GNAI1P63096 354 aa25.92■■□□□ 1.74
MMP28-207ENST00000619655 ARHGEF10O15013 1369 aa25.92■■□□□ 1.74
MMP28-207ENST00000619655 EYA1Q99502 592 aa25.92■■□□□ 1.74
MMP28-207ENST00000619655 C19orf44Q9H6X5 657 aa25.91■■□□□ 1.74
MMP28-207ENST00000619655 IFT57Q9NWB7 429 aa25.91■■□□□ 1.74
MMP28-207ENST00000619655 ZKSCAN2Q63HK3 967 aa25.91■■□□□ 1.74
MMP28-207ENST00000619655 MBIPQ9NS73 344 aa25.91■■□□□ 1.74
MMP28-207ENST00000619655 USP54Q70EL1 1684 aa25.91■■□□□ 1.74
MMP28-207ENST00000619655 KDM2BQ8NHM5 1336 aa25.9■■□□□ 1.74
MMP28-207ENST00000619655 ELL2O00472 640 aaPredicted RBP25.89■■□□□ 1.74
MMP28-207ENST00000619655 FTSJ3Q8IY81 847 aaKnown RBP25.89■■□□□ 1.74
MMP28-207ENST00000619655 MCM10Q7L590 875 aa25.89■■□□□ 1.74
MMP28-207ENST00000619655 CENPQQ7L2Z9 268 aaPredicted RBP25.88■■□□□ 1.73
MMP28-207ENST00000619655 TMEM94Q12767 1356 aa25.88■■□□□ 1.73
MMP28-207ENST00000619655 LTN1O94822 1766 aa25.88■■□□□ 1.73
MMP28-207ENST00000619655 STRCP1A6NGW2 1772 aa25.88■■□□□ 1.73
MMP28-207ENST00000619655 CFAP44Q96MT7 982 aa25.87■■□□□ 1.73
MMP28-207ENST00000619655 IGSF1Q8N6C5 1336 aa25.87■■□□□ 1.73
MMP28-207ENST00000619655 TSPYL6Q8N831 410 aa25.86■■□□□ 1.73
MMP28-207ENST00000619655 NOB1Q9ULX3 412 aaKnown RBP25.86■■□□□ 1.73
MMP28-207ENST00000619655 ZNF853P0CG23 659 aa25.86■■□□□ 1.73
MMP28-207ENST00000619655 ATF3P18847 181 aa25.86■■□□□ 1.73
MMP28-207ENST00000619655 C1orf167Q5SNV9 1468 aa25.85■■□□□ 1.73
MMP28-207ENST00000619655 DZIP1LQ8IYY4 767 aaKnown RBP25.85■■□□□ 1.73
MMP28-207ENST00000619655 MTHFSDQ2M296 383 aaKnown RBP25.85■■□□□ 1.73
MMP28-207ENST00000619655 KIF24Q5T7B8 1368 aa25.84■■□□□ 1.73
MMP28-207ENST00000619655 KDM4FA0A1W2PPD8 638 aa25.84■■□□□ 1.73
MMP28-207ENST00000619655 TRIM27P14373 513 aa25.84■■□□□ 1.73
MMP28-207ENST00000619655 KDRP35968 1356 aa25.83■■□□□ 1.73
MMP28-207ENST00000619655 KRT28Q7Z3Y7 464 aa25.83■■□□□ 1.73
MMP28-207ENST00000619655 USHBP1Q8N6Y0 703 aa25.82■■□□□ 1.72
MMP28-207ENST00000619655 NFAT5O94916 1531 aa25.81■■□□□ 1.72
MMP28-207ENST00000619655 TCERG1O14776 1098 aaKnown RBP25.81■■□□□ 1.72
MMP28-207ENST00000619655 ATF7IPQ6VMQ6 1270 aa25.81■■□□□ 1.72
MMP28-207ENST00000619655 KCNH5Q8NCM2 988 aa25.81■■□□□ 1.72
MMP28-207ENST00000619655 VAMP4O75379 141 aa25.81■■□□□ 1.72
MMP28-207ENST00000619655 MVPQ14764 893 aaKnown RBP25.81■■□□□ 1.72
MMP28-207ENST00000619655 ALDH1L2Q3SY69 923 aa25.81■■□□□ 1.72
MMP28-207ENST00000619655 KIF16BQ96L93 1317 aa25.8■■□□□ 1.72
MMP28-207ENST00000619655 IGHDP01880 384 aa25.8■■□□□ 1.72
MMP28-207ENST00000619655 TWISTNBQ3B726 338 aaPredicted RBP25.8■■□□□ 1.72
MMP28-207ENST00000619655 C8orf58Q8NAV2 365 aa25.8■■□□□ 1.72
MMP28-207ENST00000619655 RTF1Q92541 710 aaKnown RBP25.8■■□□□ 1.72
MMP28-207ENST00000619655 DDX17Q92841 729 aaKnown RBP25.8■■□□□ 1.72
MMP28-207ENST00000619655 RTL1A6NKG5 1358 aa25.79■■□□□ 1.72
MMP28-207ENST00000619655 MS4A1P11836 297 aa25.79■■□□□ 1.72
MMP28-207ENST00000619655 ITPRIPQ8IWB1 547 aa25.79■■□□□ 1.72
MMP28-207ENST00000619655 IP6K1Q92551 441 aa25.79■■□□□ 1.72
MMP28-207ENST00000619655 GCP02774 474 aa25.77■■□□□ 1.72
MMP28-207ENST00000619655 KIF1AQ12756 1690 aa25.77■■□□□ 1.72
MMP28-207ENST00000619655 MST1RQ04912 1400 aa25.76■■□□□ 1.72
MMP28-207ENST00000619655 IPO8O15397 1037 aaKnown RBP25.76■■□□□ 1.71
MMP28-207ENST00000619655 GAS2L2Q8NHY3 880 aa25.76■■□□□ 1.71
MMP28-207ENST00000619655 ZNF428Q96B54 188 aa25.76■■□□□ 1.71
MMP28-207ENST00000619655 MIS18AQ9NYP9 233 aa25.75■■□□□ 1.71
MMP28-207ENST00000619655 LMTK3Q96Q04 1460 aa25.75■■□□□ 1.71
MMP28-207ENST00000619655 KRT24Q2M2I5 525 aa25.75■■□□□ 1.71
MMP28-207ENST00000619655 PCDHB15Q9Y5E8 787 aa25.75■■□□□ 1.71
MMP28-207ENST00000619655 TRPM3Q9HCF6 1732 aaPredicted RBP25.75■■□□□ 1.71
MMP28-207ENST00000619655 TMEM57Q8N5G2 664 aa25.74■■□□□ 1.71
MMP28-207ENST00000619655 CHL1O00533 1208 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms