RNA–Protein interactions for RNA: ENST00000619550.4

HNF4A-209, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 5 BASIC

Gene HNF4A, Length 4,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-209ENST00000619550 TATP17735 454 aaPredicted RBP13.15□□□□□ -0.3
HNF4A-209ENST00000619550 DHX8Q14562 1220 aaKnown RBP13.15□□□□□ -0.3
HNF4A-209ENST00000619550 TSR2Q969E8 191 aaKnown RBP13.15□□□□□ -0.3
HNF4A-209ENST00000619550 IGHDP01880 384 aa13.14□□□□□ -0.31
HNF4A-209ENST00000619550 HS1BP3Q53T59 392 aa13.14□□□□□ -0.31
HNF4A-209ENST00000619550 HSP90B2PQ58FF3 399 aa13.14□□□□□ -0.31
HNF4A-209ENST00000619550 CCDC112Q8NEF3 446 aa13.14□□□□□ -0.31
HNF4A-209ENST00000619550 ERC2O15083 957 aa13.14□□□□□ -0.31
HNF4A-209ENST00000619550 CBX1P83916 185 aa13.14□□□□□ -0.31
HNF4A-209ENST00000619550 SYCE3A1L190 88 aa13.14□□□□□ -0.31
HNF4A-209ENST00000619550 NUTM2GQ5VZR2 741 aa13.14□□□□□ -0.31
HNF4A-209ENST00000619550 CCDC94Q9BW85 323 aaPredicted RBP13.13□□□□□ -0.31
HNF4A-209ENST00000619550 CCDC192P0DO97 292 aa13.13□□□□□ -0.31
HNF4A-209ENST00000619550 KLHL40Q2TBA0 621 aa13.13□□□□□ -0.31
HNF4A-209ENST00000619550 ABCA5Q8WWZ7 1642 aa13.13□□□□□ -0.31
HNF4A-209ENST00000619550 TIGD1Q96MW7 591 aa13.13□□□□□ -0.31
HNF4A-209ENST00000619550 RRAGDQ9NQL2 400 aaPredicted RBP13.13□□□□□ -0.31
HNF4A-209ENST00000619550 G3BP1Q13283 466 aaKnown RBP eCLIP13.13□□□□□ -0.316e-9■□□□□ 9.6
HNF4A-209ENST00000619550 NOC3LQ8WTT2 800 aaKnown RBP13.13□□□□□ -0.31
HNF4A-209ENST00000619550 OFD1O75665 1012 aa13.12□□□□□ -0.31
HNF4A-209ENST00000619550 RDXP35241 583 aaKnown RBP13.12□□□□□ -0.31
HNF4A-209ENST00000619550 CCDC73Q6ZRK6 1079 aa13.12□□□□□ -0.31
HNF4A-209ENST00000619550 SSFA2P28290 1259 aa13.12□□□□□ -0.31
HNF4A-209ENST00000619550 IRX3P78415 501 aaPredicted RBP13.12□□□□□ -0.31
HNF4A-209ENST00000619550 MPNDQ8N594 471 aa13.12□□□□□ -0.31
HNF4A-209ENST00000619550 SPC24Q8NBT2 197 aa13.12□□□□□ -0.31
HNF4A-209ENST00000619550 CCDC30Q5VVM6 783 aa13.12□□□□□ -0.31
HNF4A-209ENST00000619550 KCNH5Q8NCM2 988 aa13.12□□□□□ -0.31
HNF4A-209ENST00000619550 C1orf115Q9H7X2 142 aa13.12□□□□□ -0.31
HNF4A-209ENST00000619550 CCP110O43303 1012 aa13.12□□□□□ -0.31
HNF4A-209ENST00000619550 FIBPO43427 364 aa13.12□□□□□ -0.31
HNF4A-209ENST00000619550 PRKAR2BP31323 418 aa13.12□□□□□ -0.31
HNF4A-209ENST00000619550 NOL10Q9BSC4 688 aaKnown RBP13.12□□□□□ -0.31
HNF4A-209ENST00000619550 PLCH2O75038 1416 aa13.11□□□□□ -0.31
HNF4A-209ENST00000619550 ZNF428Q96B54 188 aa13.11□□□□□ -0.31
HNF4A-209ENST00000619550 RIC3Q7Z5B4 369 aa13.11□□□□□ -0.31
HNF4A-209ENST00000619550 NAT10Q9H0A0 1025 aaKnown RBP13.11□□□□□ -0.31
HNF4A-209ENST00000619550 DMRT2Q9Y5R5 561 aa13.11□□□□□ -0.31
HNF4A-209ENST00000619550 IFIT2P09913 472 aaKnown RBP13.11□□□□□ -0.31
HNF4A-209ENST00000619550 CCDC70Q6NSX1 233 aa13.11□□□□□ -0.31
HNF4A-209ENST00000619550 PDCP20941 246 aa13.1□□□□□ -0.31
HNF4A-209ENST00000619550 GNAI3P08754 354 aa13.1□□□□□ -0.31
HNF4A-209ENST00000619550 CCDC27Q2M243 656 aa13.1□□□□□ -0.31
HNF4A-209ENST00000619550 AMOTL1Q8IY63 956 aa13.1□□□□□ -0.31
HNF4A-209ENST00000619550 ERCC4Q92889 916 aaPredicted RBP13.1□□□□□ -0.31
HNF4A-209ENST00000619550 CPLX2Q6PUV4 134 aaKnown RBP13.09□□□□□ -0.31
HNF4A-209ENST00000619550 NUDT16Q96DE0 195 aaKnown RBP13.09□□□□□ -0.31
HNF4A-209ENST00000619550 TOMM22Q9NS69 142 aa13.09□□□□□ -0.31
HNF4A-209ENST00000619550 IDI1Q13907 227 aa13.09□□□□□ -0.31
HNF4A-209ENST00000619550 PRDM11Q9NQV5 511 aa13.09□□□□□ -0.31
HNF4A-209ENST00000619550 SPG7Q9UQ90 795 aa13.09□□□□□ -0.31
HNF4A-209ENST00000619550 BAG4O95429 457 aaKnown RBP13.09□□□□□ -0.31
HNF4A-209ENST00000619550 TPM1P09493 284 aa13.09□□□□□ -0.31
HNF4A-209ENST00000619550 GPATCH8Q9UKJ3 1502 aaKnown RBP13.09□□□□□ -0.31
HNF4A-209ENST00000619550 ATP10BO94823 1461 aa13.09□□□□□ -0.31
HNF4A-209ENST00000619550 TMEM57Q8N5G2 664 aa13.09□□□□□ -0.31
HNF4A-209ENST00000619550 BCL11BQ9C0K0 894 aaPredicted RBP13.09□□□□□ -0.31
HNF4A-209ENST00000619550 PBRM1Q86U86 1689 aa13.08□□□□□ -0.32
HNF4A-209ENST00000619550 RAPGEF6Q8TEU7 1601 aa13.08□□□□□ -0.32
HNF4A-209ENST00000619550 TULP1O00294 542 aaPredicted RBP13.08□□□□□ -0.32
HNF4A-209ENST00000619550 TWISTNBQ3B726 338 aaPredicted RBP13.08□□□□□ -0.32
HNF4A-209ENST00000619550 PPP4R3BQ5MIZ7 849 aa13.08□□□□□ -0.32
HNF4A-209ENST00000619550 ASXL2Q76L83 1435 aa13.08□□□□□ -0.32
HNF4A-209ENST00000619550 SULT6B1Q6IMI4 303 aa13.07□□□□□ -0.32
HNF4A-209ENST00000619550 EIF4G3O43432 1585 aaKnown RBP13.07□□□□□ -0.32
HNF4A-209ENST00000619550 UBTFL1P0CB47 393 aaPredicted RBP13.07□□□□□ -0.32
HNF4A-209ENST00000619550 VPS37DQ86XT2 251 aa13.07□□□□□ -0.32
HNF4A-209ENST00000619550 AEBP1Q8IUX7 1158 aa13.07□□□□□ -0.32
HNF4A-209ENST00000619550 KIF2AO00139 706 aaPredicted RBP13.06□□□□□ -0.32
HNF4A-209ENST00000619550 TOM1L2Q6ZVM7 507 aa13.06□□□□□ -0.32
HNF4A-209ENST00000619550 NECTIN2Q92692 538 aa13.06□□□□□ -0.32
HNF4A-209ENST00000619550 FCHSD2O94868 740 aa13.06□□□□□ -0.32
HNF4A-209ENST00000619550 PSMA5P28066 241 aa13.06□□□□□ -0.32
HNF4A-209ENST00000619550 CTR9Q6PD62 1173 aa13.06□□□□□ -0.32
HNF4A-209ENST00000619550 BMP2KLQ5H9B9 411 aa13.06□□□□□ -0.32
HNF4A-209ENST00000619550 SYNE3Q6ZMZ3 975 aa13.06□□□□□ -0.32
HNF4A-209ENST00000619550 ITSN2Q9NZM3 1697 aa13.06□□□□□ -0.32
HNF4A-209ENST00000619550 SNX21Q969T3 373 aa13.05□□□□□ -0.32
HNF4A-209ENST00000619550 PARD3Q8TEW0 1356 aa13.05□□□□□ -0.32
HNF4A-209ENST00000619550 CNTROBQ8N137 903 aa13.05□□□□□ -0.32
HNF4A-209ENST00000619550 PTPRKQ15262 1439 aa13.05□□□□□ -0.32
HNF4A-209ENST00000619550 TSR1Q2NL82 804 aaKnown RBP13.05□□□□□ -0.32
HNF4A-209ENST00000619550 NUP160Q12769 1436 aa13.05□□□□□ -0.32
HNF4A-209ENST00000619550 ZNF530Q6P9A1 599 aaPredicted RBP13.05□□□□□ -0.32
HNF4A-209ENST00000619550 STRN4Q9NRL3 753 aa13.05□□□□□ -0.32
HNF4A-209ENST00000619550 KIAA0556O60303 1618 aa13.05□□□□□ -0.32
HNF4A-209ENST00000619550 SDF4Q9BRK5 362 aa13.04□□□□□ -0.32
HNF4A-209ENST00000619550 H0YHG0 523 aa13.04□□□□□ -0.32
HNF4A-209ENST00000619550 KRT85P78386 507 aa13.04□□□□□ -0.32
HNF4A-209ENST00000619550 TNMDQ9H2S6 317 aa13.04□□□□□ -0.32
HNF4A-209ENST00000619550 WDR7Q9Y4E6 1490 aa13.04□□□□□ -0.32
HNF4A-209ENST00000619550 ZSCAN23Q3MJ62 389 aa13.04□□□□□ -0.32
HNF4A-209ENST00000619550 ZKSCAN5Q9Y2L8 839 aa13.04□□□□□ -0.32
HNF4A-209ENST00000619550 CFAP43Q8NDM7 1665 aa13.04□□□□□ -0.32
HNF4A-209ENST00000619550 ZNF518AQ6AHZ1 1483 aa13.04□□□□□ -0.32
HNF4A-209ENST00000619550 CCDC183Q5T5S1 534 aa13.04□□□□□ -0.32
HNF4A-209ENST00000619550 RPAP2Q8IXW5 612 aaPredicted RBP13.04□□□□□ -0.32
HNF4A-209ENST00000619550 SSH1Q8WYL5 1049 aa13.04□□□□□ -0.32
HNF4A-209ENST00000619550 KINO60870 393 aaKnown RBP13.03□□□□□ -0.32
HNF4A-209ENST00000619550 AKAP17AQ02040 695 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms