RNA–Protein interactions for RNA: ENST00000619160.4

PCSK6-218, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-218ENST00000619160 CAVIN1Q6NZI2 390 aaKnown RBP28.62■■■□□ 2.17
PCSK6-218ENST00000619160 GLI2P10070 1586 aa28.61■■■□□ 2.17
PCSK6-218ENST00000619160 ATAD2Q6PL18 1390 aa28.61■■■□□ 2.17
PCSK6-218ENST00000619160 MSNP26038 577 aaKnown RBP28.6■■■□□ 2.17
PCSK6-218ENST00000619160 ZC3H13Q5T200 1668 aaKnown RBP28.6■■■□□ 2.17
PCSK6-218ENST00000619160 IDI1Q13907 227 aa28.6■■■□□ 2.17
PCSK6-218ENST00000619160 CALD1Q05682 793 aaKnown RBP28.59■■■□□ 2.17
PCSK6-218ENST00000619160 KLHL40Q2TBA0 621 aa28.59■■■□□ 2.17
PCSK6-218ENST00000619160 GSPT1P15170 499 aaKnown RBP28.59■■■□□ 2.17
PCSK6-218ENST00000619160 TWISTNBQ3B726 338 aaPredicted RBP28.58■■■□□ 2.17
PCSK6-218ENST00000619160 COL3A1P02461 1466 aaPredicted RBP28.58■■■□□ 2.17
PCSK6-218ENST00000619160 C16orf71Q8IYS4 520 aaPredicted RBP28.58■■■□□ 2.17
PCSK6-218ENST00000619160 NFE2L2Q16236 605 aa28.58■■■□□ 2.17
PCSK6-218ENST00000619160 MBIPQ9NS73 344 aa28.58■■■□□ 2.17
PCSK6-218ENST00000619160 ABCA9Q8IUA7 1624 aa28.57■■■□□ 2.16
PCSK6-218ENST00000619160 ZNF428Q96B54 188 aa28.57■■■□□ 2.16
PCSK6-218ENST00000619160 CDK19Q9BWU1 502 aa28.56■■■□□ 2.16
PCSK6-218ENST00000619160 GNAI1P63096 354 aa28.56■■■□□ 2.16
PCSK6-218ENST00000619160 PKP1Q13835 747 aa28.56■■■□□ 2.16
PCSK6-218ENST00000619160 PPLO60437 1756 aa28.55■■■□□ 2.16
PCSK6-218ENST00000619160 RABEP1Q15276 862 aa28.55■■■□□ 2.16
PCSK6-218ENST00000619160 ZSCAN30Q86W11 494 aa28.55■■■□□ 2.16
PCSK6-218ENST00000619160 LMTK2Q8IWU2 1503 aa28.55■■■□□ 2.16
PCSK6-218ENST00000619160 POLKQ9UBT6 870 aa28.54■■■□□ 2.16
PCSK6-218ENST00000619160 PLEKHM2Q8IWE5 1019 aa28.54■■■□□ 2.16
PCSK6-218ENST00000619160 C8orf58Q8NAV2 365 aa28.54■■■□□ 2.16
PCSK6-218ENST00000619160 ARHGAP45Q92619 1136 aa28.54■■■□□ 2.16
PCSK6-218ENST00000619160 R3HCC1Q9Y3T6 440 aaKnown RBP28.54■■■□□ 2.16
PCSK6-218ENST00000619160 FOXD4L5Q5VV16 416 aaPredicted RBP28.54■■■□□ 2.16
PCSK6-218ENST00000619160 FOXD4L4Q8WXT5 416 aaPredicted RBP28.54■■■□□ 2.16
PCSK6-218ENST00000619160 EMILIN1Q9Y6C2 1016 aa28.53■■■□□ 2.16
PCSK6-218ENST00000619160 KIDINS220Q9ULH0 1771 aa28.53■■■□□ 2.16
PCSK6-218ENST00000619160 ASXL2Q76L83 1435 aa28.52■■■□□ 2.16
PCSK6-218ENST00000619160 DCTN1Q14203 1278 aa28.52■■■□□ 2.16
PCSK6-218ENST00000619160 OTUD7AQ8TE49 926 aaPredicted RBP28.52■■■□□ 2.16
PCSK6-218ENST00000619160 FAM83GA6ND36 823 aa28.51■■■□□ 2.16
PCSK6-218ENST00000619160 CFAP74Q9C0B2 1584 aa28.51■■■□□ 2.16
PCSK6-218ENST00000619160 NUCB2P80303 420 aa28.51■■■□□ 2.15
PCSK6-218ENST00000619160 API5Q9BZZ5 524 aaKnown RBP28.51■■■□□ 2.15
PCSK6-218ENST00000619160 PRPF40AO75400 957 aaKnown RBP28.5■■■□□ 2.15
PCSK6-218ENST00000619160 BRPF1P55201 1214 aaPredicted RBP28.5■■■□□ 2.15
PCSK6-218ENST00000619160 PPP1R9BQ96SB3 815 aa28.5■■■□□ 2.15
PCSK6-218ENST00000619160 RAPGEF3O95398 923 aa28.49■■■□□ 2.15
PCSK6-218ENST00000619160 ZSCAN23Q3MJ62 389 aa28.49■■■□□ 2.15
PCSK6-218ENST00000619160 MED14O60244 1454 aa28.49■■■□□ 2.15
PCSK6-218ENST00000619160 IFT57Q9NWB7 429 aa28.49■■■□□ 2.15
PCSK6-218ENST00000619160 ABCC4O15439 1325 aa28.49■■■□□ 2.15
PCSK6-218ENST00000619160 ZBTB7CA1YPR0 619 aa28.48■■■□□ 2.15
PCSK6-218ENST00000619160 SMARCA5O60264 1052 aaPredicted RBP28.48■■■□□ 2.15
PCSK6-218ENST00000619160 NPM1P06748 294 aaKnown RBP eCLIP28.48■■■□□ 2.15
PCSK6-218ENST00000619160 ZGPATQ8N5A5 531 aaKnown RBP28.48■■■□□ 2.15
PCSK6-218ENST00000619160 TTC22Q5TAA0 569 aa28.48■■■□□ 2.15
PCSK6-218ENST00000619160 CHAMP1Q96JM3 812 aa28.48■■■□□ 2.15
PCSK6-218ENST00000619160 RBM27Q9P2N5 1060 aaKnown RBP28.48■■■□□ 2.15
PCSK6-218ENST00000619160 INTS3Q68E01 1043 aaKnown RBP28.47■■■□□ 2.15
PCSK6-218ENST00000619160 PNPLA6Q8IY17 1366 aa28.47■■■□□ 2.15
PCSK6-218ENST00000619160 PRDM4Q9UKN5 801 aa28.47■■■□□ 2.15
PCSK6-218ENST00000619160 LRRC7Q96NW7 1537 aa28.46■■■□□ 2.15
PCSK6-218ENST00000619160 CAMSAP1Q5T5Y3 1602 aa28.46■■■□□ 2.15
PCSK6-218ENST00000619160 ARHGEF28Q8N1W1 1705 aaKnown RBP28.46■■■□□ 2.15
PCSK6-218ENST00000619160 USP26Q9BXU7 913 aa28.46■■■□□ 2.15
PCSK6-218ENST00000619160 STAG3Q9UJ98 1225 aa28.46■■■□□ 2.15
PCSK6-218ENST00000619160 PRDM10Q9NQV6 1147 aa28.45■■■□□ 2.15
PCSK6-218ENST00000619160 CASC1Q6TDU7 716 aa28.45■■■□□ 2.14
PCSK6-218ENST00000619160 LMBRD1Q9NUN5 540 aa28.45■■■□□ 2.14
PCSK6-218ENST00000619160 ST18O60284 1047 aa28.44■■■□□ 2.14
PCSK6-218ENST00000619160 RBSNQ9H1K0 784 aa28.44■■■□□ 2.14
PCSK6-218ENST00000619160 PTCH1Q13635 1447 aa28.44■■■□□ 2.14
PCSK6-218ENST00000619160 PRIM1P49642 420 aaKnown RBP28.44■■■□□ 2.14
PCSK6-218ENST00000619160 FAM135BQ49AJ0 1406 aa28.43■■■□□ 2.14
PCSK6-218ENST00000619160 DCTPP1Q9H773 170 aa28.43■■■□□ 2.14
PCSK6-218ENST00000619160 CLEC17AQ6ZS10 378 aa28.43■■■□□ 2.14
PCSK6-218ENST00000619160 SDSP20132 328 aa28.42■■■□□ 2.14
PCSK6-218ENST00000619160 XPCQ01831 940 aaPredicted RBP28.42■■■□□ 2.14
PCSK6-218ENST00000619160 OFD1O75665 1012 aa28.41■■■□□ 2.14
PCSK6-218ENST00000619160 KRT24Q2M2I5 525 aa28.41■■■□□ 2.14
PCSK6-218ENST00000619160 WAPLQ7Z5K2 1190 aa28.41■■■□□ 2.14
PCSK6-218ENST00000619160 CFAP44Q96MT7 982 aa28.41■■■□□ 2.14
PCSK6-218ENST00000619160 ZRANB1Q9UGI0 708 aa28.41■■■□□ 2.14
PCSK6-218ENST00000619160 AK9Q5TCS8 1911 aa28.41■■■□□ 2.14
PCSK6-218ENST00000619160 CD163L1Q9NR16 1453 aa28.41■■■□□ 2.14
PCSK6-218ENST00000619160 PIK3R4Q99570 1358 aa28.41■■■□□ 2.14
PCSK6-218ENST00000619160 ZNF445P59923 1031 aa28.41■■■□□ 2.14
PCSK6-218ENST00000619160 ABCC3O15438 1527 aa28.4■■■□□ 2.14
PCSK6-218ENST00000619160 RRS1Q15050 365 aaKnown RBP28.4■■■□□ 2.14
PCSK6-218ENST00000619160 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.4■■■□□ 2.14
PCSK6-218ENST00000619160 NME9Q86XW9 330 aa28.39■■■□□ 2.14
PCSK6-218ENST00000619160 NEXMIFQ5QGS0 1516 aa28.39■■■□□ 2.14
PCSK6-218ENST00000619160 ZFYVE9O95405 1425 aa28.39■■■□□ 2.13
PCSK6-218ENST00000619160 NOL8Q76FK4 1167 aaKnown RBP28.38■■■□□ 2.13
PCSK6-218ENST00000619160 YTHDC2Q9H6S0 1430 aaKnown RBP28.38■■■□□ 2.13
PCSK6-218ENST00000619160 IBTKQ9P2D0 1353 aaPredicted RBP28.37■■■□□ 2.13
PCSK6-218ENST00000619160 ZNF853P0CG23 659 aa28.37■■■□□ 2.13
PCSK6-218ENST00000619160 RNF214Q8ND24 703 aa28.37■■■□□ 2.13
PCSK6-218ENST00000619160 LMOD3Q0VAK6 560 aa28.37■■■□□ 2.13
PCSK6-218ENST00000619160 ZHX1Q9UKY1 873 aaPredicted RBP28.37■■■□□ 2.13
PCSK6-218ENST00000619160 SYCE3A1L190 88 aa28.37■■■□□ 2.13
PCSK6-218ENST00000619160 SLC52A1Q9NWF4 448 aa28.37■■■□□ 2.13
PCSK6-218ENST00000619160 GPT2Q8TD30 523 aa28.36■■■□□ 2.13
PCSK6-218ENST00000619160 CWC22Q9HCG8 908 aaKnown RBP28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms