RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 ATF7IPQ6VMQ6 1270 aa3.64□□□□□ -1.83
LPP-221ENST00000618621 MAP10Q9P2G4 905 aa3.64□□□□□ -1.83
LPP-221ENST00000618621 SMC2O95347 1197 aa3.64□□□□□ -1.83
LPP-221ENST00000618621 TOMM22Q9NS69 142 aa3.64□□□□□ -1.83
LPP-221ENST00000618621 CDK19Q9BWU1 502 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 PDRG1Q9NUG6 133 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 ERICH2A1L162 156 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 SMTNL1A8MU46 457 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 DYNC1I1O14576 645 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 HDAC1Q13547 482 aaPredicted RBP3.63□□□□□ -1.83
LPP-221ENST00000618621 TNPO1Q92973 898 aaKnown RBP3.63□□□□□ -1.83
LPP-221ENST00000618621 PSMD1Q99460 953 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 SH2B1Q9NRF2 756 aaPredicted RBP3.63□□□□□ -1.83
LPP-221ENST00000618621 ZNF608Q9ULD9 1512 aaPredicted RBP3.63□□□□□ -1.83
LPP-221ENST00000618621 CBFA2T2O43439 604 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 PANK2Q9BZ23 570 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 CLCN1P35523 988 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 PES1O00541 588 aaKnown RBP3.63□□□□□ -1.83
LPP-221ENST00000618621 CDR1P51861 262 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 C8orf34Q49A92 452 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 PPFIBP1Q86W92 1011 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 SNX21Q969T3 373 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 ZNHIT6Q9NWK9 470 aaKnown RBP3.63□□□□□ -1.83
LPP-221ENST00000618621 PROSER2Q86WR7 435 aaPredicted RBP3.63□□□□□ -1.83
LPP-221ENST00000618621 CCDC112Q8NEF3 446 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 RPGRIP1LQ68CZ1 1315 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 JMYQ8N9B5 988 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 POLA1P09884 1462 aaPredicted RBP3.63□□□□□ -1.83
LPP-221ENST00000618621 MAP3K1Q13233 1512 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 FBXW7Q969H0 707 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 CCDC66A2RUB6 948 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 EXOSC9Q06265 439 aaKnown RBP3.63□□□□□ -1.83
LPP-221ENST00000618621 UVSSAQ2YD98 709 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 LARP1BQ659C4 914 aaKnown RBP3.63□□□□□ -1.83
LPP-221ENST00000618621 BAG4O95429 457 aaKnown RBP3.63□□□□□ -1.83
LPP-221ENST00000618621 RIC3Q7Z5B4 369 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 CEP89Q96ST8 783 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 NUTM2BA6NNL0 878 aaPredicted RBP3.63□□□□□ -1.83
LPP-221ENST00000618621 NUTM2EB1AL46 878 aaPredicted RBP3.63□□□□□ -1.83
LPP-221ENST00000618621 SSFA2P28290 1259 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 ALDH1L2Q3SY69 923 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 HS1BP3Q53T59 392 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 TMED8Q6PL24 325 aaPredicted RBP3.63□□□□□ -1.83
LPP-221ENST00000618621 NUTM2AQ8IVF1 878 aaPredicted RBP3.63□□□□□ -1.83
LPP-221ENST00000618621 BRMS1Q9HCU9 246 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 TBC1D2BQ9UPU7 963 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 SCAPERQ9BY12 1400 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 XPCQ01831 940 aaPredicted RBP3.63□□□□□ -1.83
LPP-221ENST00000618621 FILIP1LQ4L180 1135 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 SMC5Q8IY18 1101 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 MRC2Q9UBG0 1479 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 UQCRHLA0A096LP55 91 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 UQCRHP07919 91 aa3.63□□□□□ -1.83
LPP-221ENST00000618621 KDM2BQ8NHM5 1336 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 SNAPC4Q5SXM2 1469 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 PDILTQ8N807 584 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 KINO60870 393 aaKnown RBP3.62□□□□□ -1.83
LPP-221ENST00000618621 GTF2E1P29083 439 aaPredicted RBP3.62□□□□□ -1.83
LPP-221ENST00000618621 CCDC183Q5T5S1 534 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 ANKRD50Q9ULJ7 1429 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 KIAA1107Q9UPP5 1409 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 CTAGE5O15320 804 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 FSD2A1L4K1 749 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 SART3Q15020 963 aaKnown RBP3.62□□□□□ -1.83
LPP-221ENST00000618621 RLBP1P12271 317 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 TMPOP42166 694 aaKnown RBP3.62□□□□□ -1.83
LPP-221ENST00000618621 RPAP2Q8IXW5 612 aaPredicted RBP3.62□□□□□ -1.83
LPP-221ENST00000618621 PRAM1Q96QH2 718 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 PLCD4Q9BRC7 762 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 ROCK1Q13464 1354 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 KRT32Q14532 448 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 ESCO1Q5FWF5 840 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 CABP1Q9NZU7 370 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 PLCD3Q8N3E9 789 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 XBP1P17861 261 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 THEMISQ8N1K5 641 aaPredicted RBP3.62□□□□□ -1.83
LPP-221ENST00000618621 NLRP6P59044 892 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 VPS37DQ86XT2 251 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 TSR2Q969E8 191 aaKnown RBP3.62□□□□□ -1.83
LPP-221ENST00000618621 VPS53Q5VIR6 699 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 NEMFO60524 1076 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 CAVIN2O95810 425 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 HMOX1P09601 288 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 TEFQ10587 303 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 TMEM57Q8N5G2 664 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 KIF18AQ8NI77 898 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 CUX1P39880 1505 aa3.62□□□□□ -1.83
LPP-221ENST00000618621 SLC52A1Q9NWF4 448 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 CCDC144AA2RUR9 1427 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 NUCB1Q02818 461 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 IFT140Q96RY7 1462 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 LRRCC1Q9C099 1032 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 DACH1Q9UI36 760 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 DHX29Q7Z478 1369 aaKnown RBP3.61□□□□□ -1.83
LPP-221ENST00000618621 SLC3A2P08195 630 aaKnown RBP3.61□□□□□ -1.83
LPP-221ENST00000618621 TERF1P54274 439 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 WASHC4Q2M389 1173 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 U3KPZ7 1027 aaPredicted RBP3.61□□□□□ -1.83
LPP-221ENST00000618621 LEKR1Q6ZMV7 388 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 TOPBP1Q92547 1522 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms