RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, human

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPEB1-215	ENST00000617958	CT47B1	P0C2W7	299 aa	Predicted RBP	13.21	□□□□□ -0.29
CPEB1-215	ENST00000617958	LMBRD1	Q9NUN5	540 aa		13.21	□□□□□ -0.29
CPEB1-215	ENST00000617958	ADGRB3	O60242	1522 aa		13.21	□□□□□ -0.29
CPEB1-215	ENST00000617958	LRSAM1	Q6UWE0	723 aa		13.21	□□□□□ -0.29
CPEB1-215	ENST00000617958	PIK3C2B	O00750	1634 aa		13.21	□□□□□ -0.29
CPEB1-215	ENST00000617958	MADD	Q8WXG6	1647 aa		13.21	□□□□□ -0.29
CPEB1-215	ENST00000617958	SLC52A1	Q9NWF4	448 aa		13.2	□□□□□ -0.3
CPEB1-215	ENST00000617958	VGF	O15240	615 aa	Predicted RBP	13.2	□□□□□ -0.3
CPEB1-215	ENST00000617958	CCDC27	Q2M243	656 aa		13.2	□□□□□ -0.3
CPEB1-215	ENST00000617958	TNR	Q92752	1358 aa		13.19	□□□□□ -0.3
CPEB1-215	ENST00000617958	ZC3H13	Q5T200	1668 aa	Known RBP	13.19	□□□□□ -0.3
CPEB1-215	ENST00000617958	PRIM1	P49642	420 aa	Known RBP	13.19	□□□□□ -0.3
CPEB1-215	ENST00000617958	BMP2KL	Q5H9B9	411 aa		13.19	□□□□□ -0.3
CPEB1-215	ENST00000617958	CAVIN1	Q6NZI2	390 aa	Known RBP	13.19	□□□□□ -0.3
CPEB1-215	ENST00000617958	LTK	P29376	864 aa		13.19	□□□□□ -0.3
CPEB1-215	ENST00000617958	SLC20A2	Q08357	652 aa		13.19	□□□□□ -0.3
CPEB1-215	ENST00000617958	FEZ1	Q99689	392 aa		13.19	□□□□□ -0.3
CPEB1-215	ENST00000617958	PIBF1	Q8WXW3	757 aa		13.18	□□□□□ -0.3
CPEB1-215	ENST00000617958	KIF3A	Q9Y496	699 aa		13.18	□□□□□ -0.3
CPEB1-215	ENST00000617958	CWC22	Q9HCG8	908 aa	Known RBP	13.17	□□□□□ -0.3
CPEB1-215	ENST00000617958	FER1L4	A9Z1Z3	1794 aa		13.17	□□□□□ -0.3
CPEB1-215	ENST00000617958	TMEM131L	A2VDJ0	1609 aa		13.17	□□□□□ -0.3
CPEB1-215	ENST00000617958	CBX1	P83916	185 aa		13.17	□□□□□ -0.3
CPEB1-215	ENST00000617958	ZKSCAN2	Q63HK3	967 aa		13.17	□□□□□ -0.3
CPEB1-215	ENST00000617958	SLC26A8	Q96RN1	970 aa		13.17	□□□□□ -0.3
CPEB1-215	ENST00000617958	RIMS1	Q86UR5	1692 aa	Known RBP	13.17	□□□□□ -0.3
CPEB1-215	ENST00000617958	A2ML1	A8K2U0	1454 aa		13.17	□□□□□ -0.3
CPEB1-215	ENST00000617958	C3	P01024	1663 aa		13.16	□□□□□ -0.3
CPEB1-215	ENST00000617958	SHPRH	Q149N8	1683 aa		13.16	□□□□□ -0.3
CPEB1-215	ENST00000617958	GAS2L2	Q8NHY3	880 aa		13.16	□□□□□ -0.3
CPEB1-215	ENST00000617958	SPTLC3	Q9NUV7	552 aa		13.16	□□□□□ -0.3
CPEB1-215	ENST00000617958	DDX19B	Q9UMR2	479 aa		13.16	□□□□□ -0.3
CPEB1-215	ENST00000617958	SPATA31D1	Q6ZQQ2	1576 aa		13.16	□□□□□ -0.3
CPEB1-215	ENST00000617958	NUCB1	Q02818	461 aa		13.16	□□□□□ -0.3
CPEB1-215	ENST00000617958	ATP2B3	Q16720	1220 aa		13.16	□□□□□ -0.3
CPEB1-215	ENST00000617958	DZIP1L	Q8IYY4	767 aa	Known RBP	13.16	□□□□□ -0.3
CPEB1-215	ENST00000617958	CFAP44	Q96MT7	982 aa		13.16	□□□□□ -0.3
CPEB1-215	ENST00000617958	PPP6R1	Q9UPN7	881 aa		13.16	□□□□□ -0.3
CPEB1-215	ENST00000617958	KDM5A	P29375	1690 aa	Known RBP	13.16	□□□□□ -0.3
CPEB1-215	ENST00000617958	NEXMIF	Q5QGS0	1516 aa		13.16	□□□□□ -0.3
CPEB1-215	ENST00000617958	GABPB1	Q06547	395 aa	Predicted RBP	13.15	□□□□□ -0.3
CPEB1-215	ENST00000617958	MCTP1	Q6DN14	999 aa		13.15	□□□□□ -0.3
CPEB1-215	ENST00000617958	ARID3A	Q99856	593 aa		13.15	□□□□□ -0.3
CPEB1-215	ENST00000617958	MBD3	O95983	291 aa		13.15	□□□□□ -0.31
CPEB1-215	ENST00000617958	ANKRD7	Q92527	254 aa		13.15	□□□□□ -0.31
CPEB1-215	ENST00000617958	RBM33	Q96EV2	1170 aa	Known RBP	13.15	□□□□□ -0.31
CPEB1-215	ENST00000617958	CD2BP2	O95400	341 aa	Known RBP	13.14	□□□□□ -0.31
CPEB1-215	ENST00000617958	FKBP5	Q13451	457 aa	Predicted RBP	13.14	□□□□□ -0.31
CPEB1-215	ENST00000617958	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
CPEB1-215	ENST00000617958	KLHL34	Q8N239	644 aa		13.14	□□□□□ -0.31
CPEB1-215	ENST00000617958	PDCL2	Q8N4E4	241 aa		13.14	□□□□□ -0.31
CPEB1-215	ENST00000617958	RUNDC1	Q96C34	613 aa		13.14	□□□□□ -0.31
CPEB1-215	ENST00000617958	SCAF11	Q99590	1463 aa	Known RBP	13.13	□□□□□ -0.31
CPEB1-215	ENST00000617958	RABEP1	Q15276	862 aa		13.13	□□□□□ -0.31
CPEB1-215	ENST00000617958	UVSSA	Q2YD98	709 aa		13.13	□□□□□ -0.31
CPEB1-215	ENST00000617958	C14orf93	Q9H972	538 aa	Known RBP	13.13	□□□□□ -0.31
CPEB1-215	ENST00000617958	PPL	O60437	1756 aa		13.13	□□□□□ -0.31
CPEB1-215	ENST00000617958	FTSJ3	Q8IY81	847 aa	Known RBP	13.13	□□□□□ -0.31
CPEB1-215	ENST00000617958	TNN	Q9UQP3	1299 aa		13.13	□□□□□ -0.31
CPEB1-215	ENST00000617958	RIMS2	Q9UQ26	1411 aa		13.13	□□□□□ -0.31
CPEB1-215	ENST00000617958	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
CPEB1-215	ENST00000617958	SYCP1	Q15431	976 aa		13.12	□□□□□ -0.31
CPEB1-215	ENST00000617958	CHMP4B	Q9H444	224 aa	Known RBP	13.12	□□□□□ -0.31
CPEB1-215	ENST00000617958	IFT172	Q9UG01	1749 aa		13.12	□□□□□ -0.31
CPEB1-215	ENST00000617958	KDM4F	A0A1W2PPD8	638 aa		13.12	□□□□□ -0.31
CPEB1-215	ENST00000617958	WAPL	Q7Z5K2	1190 aa		13.12	□□□□□ -0.31
CPEB1-215	ENST00000617958	FAM184A	Q8NB25	1140 aa		13.12	□□□□□ -0.31
CPEB1-215	ENST00000617958	GPT2	Q8TD30	523 aa		13.12	□□□□□ -0.31
CPEB1-215	ENST00000617958	DIAPH3	Q9NSV4	1193 aa		13.12	□□□□□ -0.31
CPEB1-215	ENST00000617958	OGFR	Q9NZT2	677 aa		13.12	□□□□□ -0.31
CPEB1-215	ENST00000617958	HSPA2	P54652	639 aa		13.11	□□□□□ -0.31
CPEB1-215	ENST00000617958	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.11	□□□□□ -0.31
CPEB1-215	ENST00000617958	TXNDC2	Q86VQ3	553 aa		13.11	□□□□□ -0.31
CPEB1-215	ENST00000617958	BCL2L12	Q9HB09	334 aa		13.11	□□□□□ -0.31
CPEB1-215	ENST00000617958	PTMA	P06454	111 aa	Known RBP	13.11	□□□□□ -0.31
CPEB1-215	ENST00000617958	FAM193A	P78312	1265 aa		13.11	□□□□□ -0.31
CPEB1-215	ENST00000617958	CTIF	O43310	598 aa	Known RBP	13.1	□□□□□ -0.31
CPEB1-215	ENST00000617958	CHD1L	Q86WJ1	897 aa		13.09	□□□□□ -0.31
CPEB1-215	ENST00000617958	TMEM63C	Q9P1W3	806 aa		13.09	□□□□□ -0.31
CPEB1-215	ENST00000617958	MET	P08581	1390 aa		13.09	□□□□□ -0.31
CPEB1-215	ENST00000617958	CCDC66	A2RUB6	948 aa		13.09	□□□□□ -0.31
CPEB1-215	ENST00000617958	ADGRB2	O60241	1585 aa		13.09	□□□□□ -0.31
CPEB1-215	ENST00000617958	KIAA1210	Q9ULL0	1709 aa		13.09	□□□□□ -0.31
CPEB1-215	ENST00000617958	MYOM2	P54296	1465 aa		13.09	□□□□□ -0.31
CPEB1-215	ENST00000617958	TSPY26P	Q9H489	355 aa		13.09	□□□□□ -0.31
CPEB1-215	ENST00000617958	ZBTB40	Q9NUA8	1239 aa		13.09	□□□□□ -0.31
CPEB1-215	ENST00000617958	CDK11B	P21127	795 aa	Known RBP	13.08	□□□□□ -0.32
CPEB1-215	ENST00000617958	SYAP1	Q96A49	352 aa	Predicted RBP	13.08	□□□□□ -0.32
CPEB1-215	ENST00000617958	PTPRM	P28827	1452 aa		13.08	□□□□□ -0.32
CPEB1-215	ENST00000617958	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.08	□□□□□ -0.32
CPEB1-215	ENST00000617958	NUTM2F	A1L443	756 aa		13.08	□□□□□ -0.32
CPEB1-215	ENST00000617958	PHF14	O94880	888 aa		13.08	□□□□□ -0.32
CPEB1-215	ENST00000617958	CREBRF	Q8IUR6	639 aa		13.08	□□□□□ -0.32
CPEB1-215	ENST00000617958	FOXD4L1	Q9NU39	408 aa		13.08	□□□□□ -0.32
CPEB1-215	ENST00000617958	TMEM2	Q9UHN6	1383 aa		13.08	□□□□□ -0.32
CPEB1-215	ENST00000617958	NRXN1	Q9ULB1	1477 aa		13.07	□□□□□ -0.32
CPEB1-215	ENST00000617958	SYCE3	A1L190	88 aa		13.07	□□□□□ -0.32
CPEB1-215	ENST00000617958	PRPF40A	O75400	957 aa	Known RBP	13.07	□□□□□ -0.32
CPEB1-215	ENST00000617958	DNAJC2	Q99543	621 aa	Known RBP	13.07	□□□□□ -0.32
CPEB1-215	ENST00000617958	ZFYVE9	O95405	1425 aa		13.07	□□□□□ -0.32

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