RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 ADGRF5Q8IZF2 1346 aa19.59■□□□□ 0.73
NOP56-220ENST00000616692 SPATA31A3Q5VYP0 1347 aa19.59■□□□□ 0.73
NOP56-220ENST00000616692 FAM43BQ6ZT52 329 aaPredicted RBP19.59■□□□□ 0.73
NOP56-220ENST00000616692 GTPBP4Q9BZE4 634 aaKnown RBP19.59■□□□□ 0.73
NOP56-220ENST00000616692 YTHDC2Q9H6S0 1430 aaKnown RBP19.58■□□□□ 0.73
NOP56-220ENST00000616692 GJD4Q96KN9 370 aaPredicted RBP19.58■□□□□ 0.73
NOP56-220ENST00000616692 SBNO1A3KN83 1393 aa19.58■□□□□ 0.72
NOP56-220ENST00000616692 ZRANB1Q9UGI0 708 aa19.57■□□□□ 0.72
NOP56-220ENST00000616692 DLC1Q96QB1 1528 aa19.57■□□□□ 0.72
NOP56-220ENST00000616692 FRAT2O75474 233 aaPredicted RBP19.57■□□□□ 0.72
NOP56-220ENST00000616692 IGSF3O75054 1194 aa19.56■□□□□ 0.72
NOP56-220ENST00000616692 RIPK4P57078 832 aa19.56■□□□□ 0.72
NOP56-220ENST00000616692 PSME1Q06323 249 aa19.56■□□□□ 0.72
NOP56-220ENST00000616692 KIAA1211Q6ZU35 1233 aa19.56■□□□□ 0.72
NOP56-220ENST00000616692 UNC5CLQ8IV45 518 aa19.56■□□□□ 0.72
NOP56-220ENST00000616692 NWD2Q9ULI1 1742 aa19.56■□□□□ 0.72
NOP56-220ENST00000616692 USP32Q8NFA0 1604 aa19.56■□□□□ 0.72
NOP56-220ENST00000616692 PTMSP20962 102 aa19.55■□□□□ 0.72
NOP56-220ENST00000616692 C14orf93Q9H972 538 aaKnown RBP19.55■□□□□ 0.72
NOP56-220ENST00000616692 ANKARQ7Z5J8 1434 aa19.54■□□□□ 0.72
NOP56-220ENST00000616692 MPHOSPH9Q99550 1183 aa19.54■□□□□ 0.72
NOP56-220ENST00000616692 ESPNB1AK53 854 aa19.54■□□□□ 0.72
NOP56-220ENST00000616692 TNS3Q68CZ2 1445 aa19.54■□□□□ 0.72
NOP56-220ENST00000616692 FOXO3O43524 673 aa19.53■□□□□ 0.72
NOP56-220ENST00000616692 SLC20A2Q08357 652 aa19.53■□□□□ 0.72
NOP56-220ENST00000616692 PLCD4Q9BRC7 762 aa19.53■□□□□ 0.72
NOP56-220ENST00000616692 BLMP54132 1417 aaPredicted RBP19.53■□□□□ 0.72
NOP56-220ENST00000616692 DHX57Q6P158 1386 aaKnown RBP19.53■□□□□ 0.72
NOP56-220ENST00000616692 RALGAPBQ86X10 1494 aa19.53■□□□□ 0.72
NOP56-220ENST00000616692 MCCP23508 829 aa19.53■□□□□ 0.72
NOP56-220ENST00000616692 ARHGEF10O15013 1369 aa19.53■□□□□ 0.72
NOP56-220ENST00000616692 ADGRB2O60241 1585 aa19.52■□□□□ 0.72
NOP56-220ENST00000616692 CLSTN1O94985 981 aa19.52■□□□□ 0.72
NOP56-220ENST00000616692 TERF1P54274 439 aa19.52■□□□□ 0.72
NOP56-220ENST00000616692 GLI3P10071 1580 aa19.52■□□□□ 0.72
NOP56-220ENST00000616692 ZNF592Q92610 1267 aa19.52■□□□□ 0.72
NOP56-220ENST00000616692 FAM13BQ9NYF5 915 aa19.51■□□□□ 0.71
NOP56-220ENST00000616692 EIF3AQ14152 1382 aaKnown RBP19.51■□□□□ 0.71
NOP56-220ENST00000616692 ONECUT3O60422 494 aaPredicted RBP19.5■□□□□ 0.71
NOP56-220ENST00000616692 HNRNPUQ00839 825 aaKnown RBP eCLIP19.5■□□□□ 0.71
NOP56-220ENST00000616692 KRT28Q7Z3Y7 464 aa19.5■□□□□ 0.71
NOP56-220ENST00000616692 CFAP44Q96MT7 982 aa19.5■□□□□ 0.71
NOP56-220ENST00000616692 VPS72Q15906 364 aa19.5■□□□□ 0.71
NOP56-220ENST00000616692 WAPLQ7Z5K2 1190 aa19.5■□□□□ 0.71
NOP56-220ENST00000616692 PLEKHH1Q9ULM0 1364 aa19.5■□□□□ 0.71
NOP56-220ENST00000616692 SOX12O15370 315 aa19.49■□□□□ 0.71
NOP56-220ENST00000616692 ZBTB22O15209 634 aa19.49■□□□□ 0.71
NOP56-220ENST00000616692 CERS3Q8IU89 383 aa19.48■□□□□ 0.71
NOP56-220ENST00000616692 NGEFQ8N5V2 710 aa19.48■□□□□ 0.71
NOP56-220ENST00000616692 PHF8Q9UPP1 1060 aa19.48■□□□□ 0.71
NOP56-220ENST00000616692 STK26Q9P289 416 aa19.48■□□□□ 0.71
NOP56-220ENST00000616692 ANP32CO43423 234 aa19.47■□□□□ 0.71
NOP56-220ENST00000616692 PHF14O94880 888 aa19.47■□□□□ 0.71
NOP56-220ENST00000616692 DDX10Q13206 875 aaKnown RBP19.47■□□□□ 0.71
NOP56-220ENST00000616692 POGKQ9P215 609 aa19.47■□□□□ 0.71
NOP56-220ENST00000616692 ABCA3Q99758 1704 aa19.46■□□□□ 0.71
NOP56-220ENST00000616692 XRCC6P12956 609 aaKnown RBP eCLIP19.46■□□□□ 0.714e-17■□□□□ 8.1
NOP56-220ENST00000616692 PLCH1Q4KWH8 1693 aa19.45■□□□□ 0.7
NOP56-220ENST00000616692 PDE4AP27815 886 aa19.45■□□□□ 0.7
NOP56-220ENST00000616692 RGL3Q3MIN7 710 aa19.45■□□□□ 0.7
NOP56-220ENST00000616692 TMEM132EQ6IEE7 984 aa19.44■□□□□ 0.7
NOP56-220ENST00000616692 ERBB4Q15303 1308 aa19.43■□□□□ 0.7
NOP56-220ENST00000616692 TCERG1O14776 1098 aaKnown RBP19.43■□□□□ 0.7
NOP56-220ENST00000616692 AEBP1Q8IUX7 1158 aa19.43■□□□□ 0.7
NOP56-220ENST00000616692 DNAJC2Q99543 621 aaKnown RBP19.43■□□□□ 0.7
NOP56-220ENST00000616692 BACH2Q9BYV9 841 aa19.43■□□□□ 0.7
NOP56-220ENST00000616692 HMGB1P09429 215 aaKnown RBP19.42■□□□□ 0.7
NOP56-220ENST00000616692 TRIM44Q96DX7 344 aaPredicted RBP19.42■□□□□ 0.7
NOP56-220ENST00000616692 ARID3AQ99856 593 aa19.42■□□□□ 0.7
NOP56-220ENST00000616692 CCDC94Q9BW85 323 aaPredicted RBP19.42■□□□□ 0.7
NOP56-220ENST00000616692 LRP5O75197 1615 aa19.42■□□□□ 0.7
NOP56-220ENST00000616692 XPCQ01831 940 aaPredicted RBP19.42■□□□□ 0.7
NOP56-220ENST00000616692 GOLGA6L3A6NEY3 463 aa19.41■□□□□ 0.7
NOP56-220ENST00000616692 TRPM3Q9HCF6 1732 aaPredicted RBP19.41■□□□□ 0.7
NOP56-220ENST00000616692 CC2D1BQ5T0F9 858 aaKnown RBP19.4■□□□□ 0.7
NOP56-220ENST00000616692 COL14A1Q05707 1796 aaKnown RBP19.4■□□□□ 0.7
NOP56-220ENST00000616692 ADGRB1O14514 1584 aa19.4■□□□□ 0.7
NOP56-220ENST00000616692 IRX5P78411 483 aaPredicted RBP19.4■□□□□ 0.7
NOP56-220ENST00000616692 SF3B2Q13435 895 aaKnown RBP19.4■□□□□ 0.7
NOP56-220ENST00000616692 NRAPQ86VF7 1730 aa19.4■□□□□ 0.7
NOP56-220ENST00000616692 BRWD3Q6RI45 1802 aa19.39■□□□□ 0.7
NOP56-220ENST00000616692 TMEM132AQ24JP5 1023 aa19.39■□□□□ 0.69
NOP56-220ENST00000616692 SEPT12Q8IYM1 358 aa19.39■□□□□ 0.69
NOP56-220ENST00000616692 YY1AP1Q9H869 796 aa19.38■□□□□ 0.69
NOP56-220ENST00000616692 RGPD8O14715 1765 aaPredicted RBP19.38■□□□□ 0.69
NOP56-220ENST00000616692 ALS2Q96Q42 1657 aa19.38■□□□□ 0.69
NOP56-220ENST00000616692 RALBP1Q15311 655 aa19.38■□□□□ 0.69
NOP56-220ENST00000616692 GEMIN8Q9NWZ8 242 aaKnown RBP19.38■□□□□ 0.69
NOP56-220ENST00000616692 TULP4Q9NRJ4 1543 aa19.38■□□□□ 0.69
NOP56-220ENST00000616692 CGNQ9P2M7 1197 aaKnown RBP19.38■□□□□ 0.69
NOP56-220ENST00000616692 PRAM1Q96QH2 718 aa19.37■□□□□ 0.69
NOP56-220ENST00000616692 GPRASP1Q5JY77 1395 aa19.36■□□□□ 0.69
NOP56-220ENST00000616692 FSD2A1L4K1 749 aa19.36■□□□□ 0.69
NOP56-220ENST00000616692 CFAP70Q5T0N1 1121 aa19.36■□□□□ 0.69
NOP56-220ENST00000616692 PANK2Q9BZ23 570 aa19.36■□□□□ 0.69
NOP56-220ENST00000616692 KRT27Q7Z3Y8 459 aa19.36■□□□□ 0.69
NOP56-220ENST00000616692 CARD10Q9BWT7 1032 aa19.36■□□□□ 0.69
NOP56-220ENST00000616692 NUTM2FA1L443 756 aa19.35■□□□□ 0.69
NOP56-220ENST00000616692 MS4A1P11836 297 aa19.35■□□□□ 0.69
NOP56-220ENST00000616692 OFD1O75665 1012 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms