RNA–Protein interactions for RNA: ENST00000616430.1

PCDHGB6-202, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB6, Length 4,601 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-202ENST00000616430 TRIM5Q9C035 493 aa13.05□□□□□ -0.32
PCDHGB6-202ENST00000616430 HOMER1Q86YM7 354 aa13.04□□□□□ -0.32
PCDHGB6-202ENST00000616430 CCDC61Q9Y6R9 512 aa13.04□□□□□ -0.32
PCDHGB6-202ENST00000616430 PES1O00541 588 aaKnown RBP13.04□□□□□ -0.32
PCDHGB6-202ENST00000616430 UPF3BQ9BZI7 483 aaKnown RBP13.04□□□□□ -0.32
PCDHGB6-202ENST00000616430 NLRP2Q9NX02 1062 aa13.04□□□□□ -0.32
PCDHGB6-202ENST00000616430 NUDT16Q96DE0 195 aaKnown RBP13.04□□□□□ -0.32
PCDHGB6-202ENST00000616430 SDF4Q9BRK5 362 aa13.03□□□□□ -0.32
PCDHGB6-202ENST00000616430 SYNE3Q6ZMZ3 975 aa13.03□□□□□ -0.32
PCDHGB6-202ENST00000616430 NME9Q86XW9 330 aa13.03□□□□□ -0.32
PCDHGB6-202ENST00000616430 SPC24Q8NBT2 197 aa13.03□□□□□ -0.32
PCDHGB6-202ENST00000616430 SRGAP3O43295 1099 aa13.03□□□□□ -0.32
PCDHGB6-202ENST00000616430 LETM1O95202 739 aaPredicted RBP13.03□□□□□ -0.32
PCDHGB6-202ENST00000616430 TPM3P06753 285 aa13.03□□□□□ -0.32
PCDHGB6-202ENST00000616430 PDCP20941 246 aa13.03□□□□□ -0.32
PCDHGB6-202ENST00000616430 NOS1P29475 1434 aa13.03□□□□□ -0.32
PCDHGB6-202ENST00000616430 TRDNQ13061 729 aa13.03□□□□□ -0.32
PCDHGB6-202ENST00000616430 ZNF771Q7L3S4 317 aaPredicted RBP13.03□□□□□ -0.32
PCDHGB6-202ENST00000616430 SYCE3A1L190 88 aa13.03□□□□□ -0.32
PCDHGB6-202ENST00000616430 TPD52L1Q16890 204 aaPredicted RBP13.03□□□□□ -0.32
PCDHGB6-202ENST00000616430 HSPA2P54652 639 aa13.02□□□□□ -0.32
PCDHGB6-202ENST00000616430 AKAP17AQ02040 695 aaKnown RBP13.02□□□□□ -0.32
PCDHGB6-202ENST00000616430 TRIM29Q14134 588 aa13.02□□□□□ -0.32
PCDHGB6-202ENST00000616430 CYP46A1Q9Y6A2 500 aa13.02□□□□□ -0.32
PCDHGB6-202ENST00000616430 SLC26A8Q96RN1 970 aa13.02□□□□□ -0.33
PCDHGB6-202ENST00000616430 IDI1Q13907 227 aa13.02□□□□□ -0.33
PCDHGB6-202ENST00000616430 TBC1D9Q6ZT07 1266 aa13.02□□□□□ -0.33
PCDHGB6-202ENST00000616430 MAP7D2Q96T17 732 aa13.02□□□□□ -0.33
PCDHGB6-202ENST00000616430 C14orf93Q9H972 538 aaKnown RBP13.02□□□□□ -0.33
PCDHGB6-202ENST00000616430 GTF2E1P29083 439 aaPredicted RBP13.01□□□□□ -0.33
PCDHGB6-202ENST00000616430 WASHC4Q2M389 1173 aa13.01□□□□□ -0.33
PCDHGB6-202ENST00000616430 DNAJC2Q99543 621 aaKnown RBP13.01□□□□□ -0.33
PCDHGB6-202ENST00000616430 SPINK5Q9NQ38 1064 aaPredicted RBP13.01□□□□□ -0.33
PCDHGB6-202ENST00000616430 RLBP1P12271 317 aa13.01□□□□□ -0.33
PCDHGB6-202ENST00000616430 FBLN1P23142 703 aa13.01□□□□□ -0.33
PCDHGB6-202ENST00000616430 TNNT3P45378 269 aaPredicted RBP13.01□□□□□ -0.33
PCDHGB6-202ENST00000616430 CEBPZQ03701 1054 aaKnown RBP13.01□□□□□ -0.33
PCDHGB6-202ENST00000616430 BMP2KLQ5H9B9 411 aa13.01□□□□□ -0.33
PCDHGB6-202ENST00000616430 CWC27Q6UX04 472 aaKnown RBP13.01□□□□□ -0.33
PCDHGB6-202ENST00000616430 ZSCAN30Q86W11 494 aa13.01□□□□□ -0.33
PCDHGB6-202ENST00000616430 F6X3S4 739 aa13.01□□□□□ -0.33
PCDHGB6-202ENST00000616430 SIL1Q9H173 461 aa13.01□□□□□ -0.33
PCDHGB6-202ENST00000616430 ADAMTS12P58397 1594 aa13.01□□□□□ -0.33
PCDHGB6-202ENST00000616430 ATP10BO94823 1461 aa13□□□□□ -0.33
PCDHGB6-202ENST00000616430 STK3Q13188 491 aa13□□□□□ -0.33
PCDHGB6-202ENST00000616430 NUTM1Q86Y26 1132 aa13□□□□□ -0.33
PCDHGB6-202ENST00000616430 SEC24BO95487 1268 aa13□□□□□ -0.33
PCDHGB6-202ENST00000616430 RALYLQ86SE5 291 aaKnown RBP13□□□□□ -0.33
PCDHGB6-202ENST00000616430 RAPGEF6Q8TEU7 1601 aa13□□□□□ -0.33
PCDHGB6-202ENST00000616430 ASXL1Q8IXJ9 1541 aa13□□□□□ -0.33
PCDHGB6-202ENST00000616430 FAM135AQ9P2D6 1515 aa13□□□□□ -0.33
PCDHGB6-202ENST00000616430 PIP4K2BP78356 416 aa13□□□□□ -0.33
PCDHGB6-202ENST00000616430 PLEKHO1Q53GL0 409 aaPredicted RBP13□□□□□ -0.33
PCDHGB6-202ENST00000616430 NFXL1Q6ZNB6 911 aa12.99□□□□□ -0.33
PCDHGB6-202ENST00000616430 GOLGA6L1Q8N7Z2 621 aa12.99□□□□□ -0.33
PCDHGB6-202ENST00000616430 PZPP20742 1482 aa12.99□□□□□ -0.33
PCDHGB6-202ENST00000616430 CTTNBP2Q8WZ74 1663 aa12.99□□□□□ -0.33
PCDHGB6-202ENST00000616430 LARP1BQ659C4 914 aaKnown RBP12.99□□□□□ -0.33
PCDHGB6-202ENST00000616430 MTERF4Q7Z6M4 381 aaKnown RBP12.99□□□□□ -0.33
PCDHGB6-202ENST00000616430 RNF123Q5XPI4 1314 aa12.99□□□□□ -0.33
PCDHGB6-202ENST00000616430 ERC1Q8IUD2 1116 aa12.99□□□□□ -0.33
PCDHGB6-202ENST00000616430 CLSTN1O94985 981 aa12.98□□□□□ -0.33
PCDHGB6-202ENST00000616430 MX1P20591 662 aa12.98□□□□□ -0.33
PCDHGB6-202ENST00000616430 HMGN5P82970 282 aaKnown RBP12.98□□□□□ -0.33
PCDHGB6-202ENST00000616430 ZNF530Q6P9A1 599 aaPredicted RBP12.98□□□□□ -0.33
PCDHGB6-202ENST00000616430 FMNL2Q96PY5 1086 aa12.98□□□□□ -0.33
PCDHGB6-202ENST00000616430 HIP1O00291 1037 aa12.98□□□□□ -0.33
PCDHGB6-202ENST00000616430 HDAC1Q13547 482 aaPredicted RBP12.98□□□□□ -0.33
PCDHGB6-202ENST00000616430 JAKMIP1Q96N16 626 aaKnown RBP12.98□□□□□ -0.33
PCDHGB6-202ENST00000616430 ADGRL1O94910 1474 aa12.98□□□□□ -0.33
PCDHGB6-202ENST00000616430 KINO60870 393 aaKnown RBP12.98□□□□□ -0.33
PCDHGB6-202ENST00000616430 CCDC192P0DO97 292 aa12.98□□□□□ -0.33
PCDHGB6-202ENST00000616430 EVA1CP58658 441 aa12.98□□□□□ -0.33
PCDHGB6-202ENST00000616430 FAM83GA6ND36 823 aa12.97□□□□□ -0.33
PCDHGB6-202ENST00000616430 KRT85P78386 507 aa12.97□□□□□ -0.33
PCDHGB6-202ENST00000616430 CARD14Q9BXL6 1004 aa12.97□□□□□ -0.33
PCDHGB6-202ENST00000616430 KDM4AO75164 1064 aa12.97□□□□□ -0.33
PCDHGB6-202ENST00000616430 ESCO1Q5FWF5 840 aa12.97□□□□□ -0.33
PCDHGB6-202ENST00000616430 RBM33Q96EV2 1170 aaKnown RBP12.97□□□□□ -0.33
PCDHGB6-202ENST00000616430 TEX14Q8IWB6 1497 aa12.97□□□□□ -0.33
PCDHGB6-202ENST00000616430 UQCRHLA0A096LP55 91 aa12.97□□□□□ -0.33
PCDHGB6-202ENST00000616430 UQCRHP07919 91 aa12.97□□□□□ -0.33
PCDHGB6-202ENST00000616430 TPM1P09493 284 aa12.97□□□□□ -0.33
PCDHGB6-202ENST00000616430 AACSQ86V21 672 aa12.97□□□□□ -0.33
PCDHGB6-202ENST00000616430 TARBP1Q13395 1621 aaKnown RBP12.96□□□□□ -0.33
PCDHGB6-202ENST00000616430 FBXO31Q5XUX0 539 aaPredicted RBP12.96□□□□□ -0.33
PCDHGB6-202ENST00000616430 AEBP1Q8IUX7 1158 aa12.96□□□□□ -0.33
PCDHGB6-202ENST00000616430 MBIPQ9NS73 344 aa12.96□□□□□ -0.33
PCDHGB6-202ENST00000616430 XRCC6P12956 609 aaKnown RBP eCLIP12.96□□□□□ -0.33
PCDHGB6-202ENST00000616430 NUCB1Q02818 461 aa12.96□□□□□ -0.33
PCDHGB6-202ENST00000616430 TSR1Q2NL82 804 aaKnown RBP12.96□□□□□ -0.33
PCDHGB6-202ENST00000616430 TNMDQ9H2S6 317 aa12.96□□□□□ -0.33
PCDHGB6-202ENST00000616430 PDRG1Q9NUG6 133 aa12.96□□□□□ -0.33
PCDHGB6-202ENST00000616430 NUP160Q12769 1436 aa12.96□□□□□ -0.34
PCDHGB6-202ENST00000616430 BAG4O95429 457 aaKnown RBP12.96□□□□□ -0.34
PCDHGB6-202ENST00000616430 BLOC1S2Q6QNY1 142 aa12.96□□□□□ -0.34
PCDHGB6-202ENST00000616430 PANK2Q9BZ23 570 aa12.96□□□□□ -0.34
PCDHGB6-202ENST00000616430 NAT10Q9H0A0 1025 aaKnown RBP12.96□□□□□ -0.34
PCDHGB6-202ENST00000616430 CEP170Q5SW79 1584 aa12.95□□□□□ -0.34
PCDHGB6-202ENST00000616430 FERMT3Q86UX7 667 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms