RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 TSHZ3Q63HK5 1081 aa8.12□□□□□ -1.11
LMO3-235ENST00000616247 SLC4A10Q6U841 1118 aa8.12□□□□□ -1.11
LMO3-235ENST00000616247 DRC7Q8IY82 874 aa8.12□□□□□ -1.11
LMO3-235ENST00000616247 PDCL2Q8N4E4 241 aa8.12□□□□□ -1.11
LMO3-235ENST00000616247 TSPYL6Q8N831 410 aa8.12□□□□□ -1.11
LMO3-235ENST00000616247 RILPL2Q969X0 211 aa8.12□□□□□ -1.11
LMO3-235ENST00000616247 LARP6Q9BRS8 491 aaKnown RBP8.12□□□□□ -1.11
LMO3-235ENST00000616247 CWC22Q9HCG8 908 aaKnown RBP8.12□□□□□ -1.11
LMO3-235ENST00000616247 TRIM35Q9UPQ4 493 aa8.12□□□□□ -1.11
LMO3-235ENST00000616247 DIAPH1O60610 1272 aaKnown RBP8.12□□□□□ -1.11
LMO3-235ENST00000616247 GSPT1P15170 499 aaKnown RBP8.12□□□□□ -1.11
LMO3-235ENST00000616247 EFCAB2Q5VUJ9 269 aa8.12□□□□□ -1.11
LMO3-235ENST00000616247 ANO2Q9NQ90 1003 aa8.12□□□□□ -1.11
LMO3-235ENST00000616247 NPC1L1Q9UHC9 1359 aa8.11□□□□□ -1.11
LMO3-235ENST00000616247 CT47B1P0C2W7 299 aaPredicted RBP8.11□□□□□ -1.11
LMO3-235ENST00000616247 HCLS1P14317 486 aaPredicted RBP8.11□□□□□ -1.11
LMO3-235ENST00000616247 CGNQ9P2M7 1197 aaKnown RBP8.11□□□□□ -1.11
LMO3-235ENST00000616247 ITSN2Q9NZM3 1697 aa8.11□□□□□ -1.11
LMO3-235ENST00000616247 ATP10BO94823 1461 aa8.11□□□□□ -1.11
LMO3-235ENST00000616247 ZMYM3Q14202 1370 aa8.11□□□□□ -1.11
LMO3-235ENST00000616247 ZBTB7BO15156 539 aaPredicted RBP8.11□□□□□ -1.11
LMO3-235ENST00000616247 REC8O95072 547 aa8.11□□□□□ -1.11
LMO3-235ENST00000616247 ADCY5O95622 1261 aa8.11□□□□□ -1.11
LMO3-235ENST00000616247 MCM5P33992 734 aa8.11□□□□□ -1.11
LMO3-235ENST00000616247 HMGN5P82970 282 aaKnown RBP8.11□□□□□ -1.11
LMO3-235ENST00000616247 PDLIM2Q96JY6 352 aa8.11□□□□□ -1.11
LMO3-235ENST00000616247 ARHGAP5Q13017 1502 aa8.1□□□□□ -1.11
LMO3-235ENST00000616247 SDSP20132 328 aa8.1□□□□□ -1.11
LMO3-235ENST00000616247 ZNF592Q92610 1267 aa8.1□□□□□ -1.11
LMO3-235ENST00000616247 USP26Q9BXU7 913 aa8.1□□□□□ -1.11
LMO3-235ENST00000616247 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.1□□□□□ -1.11
LMO3-235ENST00000616247 FIBPO43427 364 aa8.1□□□□□ -1.11
LMO3-235ENST00000616247 GADD45BO75293 160 aaPredicted RBP8.1□□□□□ -1.11
LMO3-235ENST00000616247 U2AF2P26368 475 aaKnown RBP eCLIP8.1□□□□□ -1.11
LMO3-235ENST00000616247 GGT6Q6P531 493 aa8.1□□□□□ -1.11
LMO3-235ENST00000616247 PLEKHM2Q8IWE5 1019 aa8.1□□□□□ -1.11
LMO3-235ENST00000616247 MYRIPQ8NFW9 859 aa8.1□□□□□ -1.11
LMO3-235ENST00000616247 AK9Q5TCS8 1911 aa8.1□□□□□ -1.11
LMO3-235ENST00000616247 SCAPERQ9BY12 1400 aa8.1□□□□□ -1.11
LMO3-235ENST00000616247 NCOA3Q9Y6Q9 1424 aa8.1□□□□□ -1.11
LMO3-235ENST00000616247 PHF14O94880 888 aa8.1□□□□□ -1.11
LMO3-235ENST00000616247 TMX3Q96JJ7 454 aa8.1□□□□□ -1.11
LMO3-235ENST00000616247 DMTNQ08495 405 aa8.09□□□□□ -1.11
LMO3-235ENST00000616247 DCTN1Q14203 1278 aa8.09□□□□□ -1.11
LMO3-235ENST00000616247 ATP2B3Q16720 1220 aa8.09□□□□□ -1.11
LMO3-235ENST00000616247 SIRT2Q8IXJ6 389 aa8.09□□□□□ -1.11
LMO3-235ENST00000616247 ZDHHC9Q9Y397 364 aa8.09□□□□□ -1.11
LMO3-235ENST00000616247 MINK1Q8N4C8 1332 aaPredicted RBP8.09□□□□□ -1.11
LMO3-235ENST00000616247 TWISTNBQ3B726 338 aaPredicted RBP8.09□□□□□ -1.11
LMO3-235ENST00000616247 TTC22Q5TAA0 569 aa8.09□□□□□ -1.11
LMO3-235ENST00000616247 KANK1Q14678 1352 aa8.09□□□□□ -1.11
LMO3-235ENST00000616247 SHROOM2Q13796 1616 aa8.09□□□□□ -1.11
LMO3-235ENST00000616247 SHANK2Q9UPX8 1470 aa8.09□□□□□ -1.12
LMO3-235ENST00000616247 VGLL3A8MV65 326 aa8.08□□□□□ -1.12
LMO3-235ENST00000616247 ZSCAN20P17040 1043 aaPredicted RBP8.08□□□□□ -1.12
LMO3-235ENST00000616247 MCCP23508 829 aa8.08□□□□□ -1.12
LMO3-235ENST00000616247 ERC2O15083 957 aa8.08□□□□□ -1.12
LMO3-235ENST00000616247 BCL2L12Q9HB09 334 aa8.08□□□□□ -1.12
LMO3-235ENST00000616247 NPHP1O15259 732 aa8.08□□□□□ -1.12
LMO3-235ENST00000616247 EVC2Q86UK5 1308 aa8.08□□□□□ -1.12
LMO3-235ENST00000616247 PPIP5K1Q6PFW1 1433 aa8.08□□□□□ -1.12
LMO3-235ENST00000616247 GIMAP6Q6P9H5 292 aa8.07□□□□□ -1.12
LMO3-235ENST00000616247 USP48Q86UV5 1035 aa8.07□□□□□ -1.12
LMO3-235ENST00000616247 IFT57Q9NWB7 429 aa8.07□□□□□ -1.12
LMO3-235ENST00000616247 IBTKQ9P2D0 1353 aaPredicted RBP8.07□□□□□ -1.12
LMO3-235ENST00000616247 SYCP2Q9BX26 1530 aa8.07□□□□□ -1.12
LMO3-235ENST00000616247 SOX12O15370 315 aa8.07□□□□□ -1.12
LMO3-235ENST00000616247 PRIMPOLQ96LW4 560 aa8.07□□□□□ -1.12
LMO3-235ENST00000616247 CFAP44Q96MT7 982 aa8.07□□□□□ -1.12
LMO3-235ENST00000616247 API5Q9BZZ5 524 aaKnown RBP8.07□□□□□ -1.12
LMO3-235ENST00000616247 DIAPH3Q9NSV4 1193 aa8.07□□□□□ -1.12
LMO3-235ENST00000616247 ADCY10Q96PN6 1610 aa8.07□□□□□ -1.12
LMO3-235ENST00000616247 RIOK3O14730 519 aaKnown RBP8.07□□□□□ -1.12
LMO3-235ENST00000616247 ALDH1L2Q3SY69 923 aa8.07□□□□□ -1.12
LMO3-235ENST00000616247 ZNF710Q8N1W2 664 aa8.07□□□□□ -1.12
LMO3-235ENST00000616247 TRERF1Q96PN7 1200 aa8.07□□□□□ -1.12
LMO3-235ENST00000616247 EIF2AK4Q9P2K8 1649 aaKnown RBP8.07□□□□□ -1.12
LMO3-235ENST00000616247 FAM83GA6ND36 823 aa8.06□□□□□ -1.12
LMO3-235ENST00000616247 VAMP4O75379 141 aa8.06□□□□□ -1.12
LMO3-235ENST00000616247 MYCNP04198 464 aaPredicted RBP8.06□□□□□ -1.12
LMO3-235ENST00000616247 FGD1P98174 961 aa8.06□□□□□ -1.12
LMO3-235ENST00000616247 MRPL50Q8N5N7 158 aaKnown RBP8.06□□□□□ -1.12
LMO3-235ENST00000616247 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.06□□□□□ -1.12
LMO3-235ENST00000616247 PIBF1Q8WXW3 757 aa8.06□□□□□ -1.12
LMO3-235ENST00000616247 STAC3Q96MF2 364 aa8.06□□□□□ -1.12
LMO3-235ENST00000616247 EXOC6BQ9Y2D4 811 aa8.06□□□□□ -1.12
LMO3-235ENST00000616247 ERICH4A6NGS2 130 aa8.06□□□□□ -1.12
LMO3-235ENST00000616247 KRT24Q2M2I5 525 aa8.06□□□□□ -1.12
LMO3-235ENST00000616247 C8orf58Q8NAV2 365 aa8.06□□□□□ -1.12
LMO3-235ENST00000616247 PHACTR3Q96KR7 559 aa8.06□□□□□ -1.12
LMO3-235ENST00000616247 C16orf45Q96MC5 204 aaPredicted RBP8.06□□□□□ -1.12
LMO3-235ENST00000616247 CNPY2Q9Y2B0 182 aa8.06□□□□□ -1.12
LMO3-235ENST00000616247 ERVK-7P63135 1459 aa8.05□□□□□ -1.12
LMO3-235ENST00000616247 ZBTB22O15209 634 aa8.05□□□□□ -1.12
LMO3-235ENST00000616247 MAP4K4O95819 1239 aaPredicted RBP8.05□□□□□ -1.12
LMO3-235ENST00000616247 CYB5RLQ6IPT4 315 aa8.05□□□□□ -1.12
LMO3-235ENST00000616247 CLEC17AQ6ZS10 378 aa8.05□□□□□ -1.12
LMO3-235ENST00000616247 ABCC11Q96J66 1382 aa8.05□□□□□ -1.12
LMO3-235ENST00000616247 VPS37CA5D8V6 355 aaPredicted RBP8.05□□□□□ -1.12
LMO3-235ENST00000616247 CYP2E1P05181 493 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms