RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 TAF3Q5VWG9 929 aa14.88□□□□□ -0.03
TCF4-248ENST00000616053 DEKP35659 375 aaKnown RBP14.88□□□□□ -0.03
TCF4-248ENST00000616053 ZKSCAN2Q63HK3 967 aa14.88□□□□□ -0.03
TCF4-248ENST00000616053 NDC80O14777 642 aa14.88□□□□□ -0.03
TCF4-248ENST00000616053 LPXNO60711 386 aa14.88□□□□□ -0.03
TCF4-248ENST00000616053 TDO2P48775 406 aa14.88□□□□□ -0.03
TCF4-248ENST00000616053 UBA5Q9GZZ9 404 aa14.88□□□□□ -0.03
TCF4-248ENST00000616053 POLR3DP05423 398 aaPredicted RBP14.88□□□□□ -0.03
TCF4-248ENST00000616053 SMG6Q86US8 1419 aaKnown RBP14.88□□□□□ -0.03
TCF4-248ENST00000616053 MYO1BO43795 1136 aa14.87□□□□□ -0.03
TCF4-248ENST00000616053 CNTROBQ8N137 903 aa14.87□□□□□ -0.03
TCF4-248ENST00000616053 LARP1Q6PKG0 1096 aaKnown RBP14.87□□□□□ -0.03
TCF4-248ENST00000616053 TRMT1LQ7Z2T5 733 aaKnown RBP14.87□□□□□ -0.03
TCF4-248ENST00000616053 LRRFIP2Q9Y608 721 aaKnown RBP14.87□□□□□ -0.03
TCF4-248ENST00000616053 BAZ1BQ9UIG0 1483 aaKnown RBP14.87□□□□□ -0.03
TCF4-248ENST00000616053 TAF4BQ92750 862 aa14.87□□□□□ -0.03
TCF4-248ENST00000616053 NFKBIBQ15653 356 aa14.87□□□□□ -0.03
TCF4-248ENST00000616053 IGHMBP2P38935 993 aaKnown RBP14.87□□□□□ -0.03
TCF4-248ENST00000616053 XPCQ01831 940 aaPredicted RBP14.87□□□□□ -0.03
TCF4-248ENST00000616053 DZIP1LQ8IYY4 767 aaKnown RBP14.87□□□□□ -0.03
TCF4-248ENST00000616053 CCDC89Q8N998 374 aa14.87□□□□□ -0.03
TCF4-248ENST00000616053 API5Q9BZZ5 524 aaKnown RBP14.87□□□□□ -0.03
TCF4-248ENST00000616053 LRP2BPQ9P2M1 347 aa14.87□□□□□ -0.03
TCF4-248ENST00000616053 BMS1Q14692 1282 aaKnown RBP14.86□□□□□ -0.03
TCF4-248ENST00000616053 JMYQ8N9B5 988 aa14.86□□□□□ -0.03
TCF4-248ENST00000616053 CPLX3Q8WVH0 158 aa14.86□□□□□ -0.03
TCF4-248ENST00000616053 CCDC96Q2M329 555 aa14.86□□□□□ -0.03
TCF4-248ENST00000616053 RPGRQ92834 1020 aaKnown RBP14.86□□□□□ -0.03
TCF4-248ENST00000616053 UBAC1Q9BSL1 405 aa14.86□□□□□ -0.03
TCF4-248ENST00000616053 MAP2K1Q02750 393 aaPredicted RBP14.86□□□□□ -0.03
TCF4-248ENST00000616053 PLEKHO1Q53GL0 409 aaPredicted RBP14.86□□□□□ -0.03
TCF4-248ENST00000616053 TIGD1Q96MW7 591 aa14.86□□□□□ -0.03
TCF4-248ENST00000616053 CCDC113Q9H0I3 377 aa14.86□□□□□ -0.03
TCF4-248ENST00000616053 RIOK3O14730 519 aaKnown RBP14.86□□□□□ -0.03
TCF4-248ENST00000616053 UBE4AQ14139 1066 aa14.86□□□□□ -0.03
TCF4-248ENST00000616053 DIAPH1O60610 1272 aaKnown RBP14.86□□□□□ -0.03
TCF4-248ENST00000616053 STK38Q15208 465 aa14.86□□□□□ -0.03
TCF4-248ENST00000616053 LEKR1Q6ZMV7 388 aa14.85□□□□□ -0.03
TCF4-248ENST00000616053 ZNF652Q9Y2D9 606 aa14.85□□□□□ -0.03
TCF4-248ENST00000616053 GTPBP4Q9BZE4 634 aaKnown RBP14.85□□□□□ -0.03
TCF4-248ENST00000616053 DACH1Q9UI36 760 aa14.85□□□□□ -0.03
TCF4-248ENST00000616053 ZSCAN25Q6NSZ9 544 aa14.84□□□□□ -0.03
TCF4-248ENST00000616053 CCP110O43303 1012 aa14.84□□□□□ -0.03
TCF4-248ENST00000616053 KCNA4P22459 653 aa14.84□□□□□ -0.03
TCF4-248ENST00000616053 ZNF396Q96N95 335 aaPredicted RBP14.84□□□□□ -0.03
TCF4-248ENST00000616053 PPP1R9BQ96SB3 815 aa14.84□□□□□ -0.03
TCF4-248ENST00000616053 PUF60Q9UHX1 559 aaKnown RBP14.84□□□□□ -0.03
TCF4-248ENST00000616053 KIF27Q86VH2 1401 aa14.84□□□□□ -0.03
TCF4-248ENST00000616053 SERPINC1P01008 464 aa14.84□□□□□ -0.03
TCF4-248ENST00000616053 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.84□□□□□ -0.03
TCF4-248ENST00000616053 PRC1O43663 620 aa14.84□□□□□ -0.03
TCF4-248ENST00000616053 PRDM11Q9NQV5 511 aa14.83□□□□□ -0.03
TCF4-248ENST00000616053 INTS3Q68E01 1043 aaKnown RBP14.83□□□□□ -0.04
TCF4-248ENST00000616053 RSPH6AQ9H0K4 717 aa14.83□□□□□ -0.04
TCF4-248ENST00000616053 CEBPZQ03701 1054 aaKnown RBP14.83□□□□□ -0.04
TCF4-248ENST00000616053 FAM193AP78312 1265 aa14.83□□□□□ -0.04
TCF4-248ENST00000616053 CCDC82Q8N4S0 544 aa14.83□□□□□ -0.04
TCF4-248ENST00000616053 NGLY1Q96IV0 654 aa14.83□□□□□ -0.04
TCF4-248ENST00000616053 SERPINA10Q9UK55 444 aa14.83□□□□□ -0.04
TCF4-248ENST00000616053 SPATA32Q96LK8 384 aa14.82□□□□□ -0.04
TCF4-248ENST00000616053 MKNK2Q9HBH9 465 aa14.82□□□□□ -0.04
TCF4-248ENST00000616053 ERLIN1O75477 346 aa14.82□□□□□ -0.04
TCF4-248ENST00000616053 RNF187Q5TA31 235 aaPredicted RBP14.82□□□□□ -0.04
TCF4-248ENST00000616053 SPINK5Q9NQ38 1064 aaPredicted RBP14.82□□□□□ -0.04
TCF4-248ENST00000616053 FAM13BQ9NYF5 915 aa14.82□□□□□ -0.04
TCF4-248ENST00000616053 SAMM50Q9Y512 469 aa14.82□□□□□ -0.04
TCF4-248ENST00000616053 RIPK4P57078 832 aa14.81□□□□□ -0.04
TCF4-248ENST00000616053 NUCB2P80303 420 aa14.81□□□□□ -0.04
TCF4-248ENST00000616053 NCBP1Q09161 790 aaKnown RBP14.81□□□□□ -0.04
TCF4-248ENST00000616053 IQCEQ6IPM2 695 aa14.81□□□□□ -0.04
TCF4-248ENST00000616053 ZNF622Q969S3 477 aaKnown RBP eCLIP14.81□□□□□ -0.042e-6■■■□□ 17.7
TCF4-248ENST00000616053 ODF2LQ9ULJ1 636 aa14.81□□□□□ -0.04
TCF4-248ENST00000616053 ANKRD30AQ9BXX3 1397 aa14.81□□□□□ -0.04
TCF4-248ENST00000616053 ABCF2Q9UG63 623 aa14.81□□□□□ -0.04
TCF4-248ENST00000616053 CKAP2LQ8IYA6 745 aa14.81□□□□□ -0.04
TCF4-248ENST00000616053 FKBP4Q02790 459 aaKnown RBP eCLIP14.81□□□□□ -0.04
TCF4-248ENST00000616053 CFAP45Q9UL16 551 aa14.81□□□□□ -0.04
TCF4-248ENST00000616053 UACAQ9BZF9 1416 aa14.81□□□□□ -0.04
TCF4-248ENST00000616053 ZNF428Q96B54 188 aa14.8□□□□□ -0.04
TCF4-248ENST00000616053 HIP1O00291 1037 aa14.8□□□□□ -0.04
TCF4-248ENST00000616053 KIF20AO95235 890 aa14.8□□□□□ -0.04
TCF4-248ENST00000616053 EIF5P55010 431 aaKnown RBP14.8□□□□□ -0.04
TCF4-248ENST00000616053 SYNCQ9H7C4 482 aa14.8□□□□□ -0.04
TCF4-248ENST00000616053 ADAMTS2O95450 1211 aa14.8□□□□□ -0.04
TCF4-248ENST00000616053 NOD1Q9Y239 953 aa14.8□□□□□ -0.04
TCF4-248ENST00000616053 HSPA5P11021 654 aaKnown RBP14.79□□□□□ -0.04
TCF4-248ENST00000616053 SNX16P57768 344 aa14.79□□□□□ -0.04
TCF4-248ENST00000616053 SPG7Q9UQ90 795 aa14.79□□□□□ -0.04
TCF4-248ENST00000616053 DZIP1Q86YF9 867 aaKnown RBP14.79□□□□□ -0.04
TCF4-248ENST00000616053 SREK1Q8WXA9 508 aaKnown RBP14.79□□□□□ -0.04
TCF4-248ENST00000616053 ACTN2P35609 894 aa14.79□□□□□ -0.04
TCF4-248ENST00000616053 KMT5BQ4FZB7 885 aa14.79□□□□□ -0.04
TCF4-248ENST00000616053 ALS2CR12Q96Q35 445 aa14.79□□□□□ -0.04
TCF4-248ENST00000616053 HMOX1P09601 288 aa14.79□□□□□ -0.04
TCF4-248ENST00000616053 ATF7IPQ6VMQ6 1270 aa14.79□□□□□ -0.04
TCF4-248ENST00000616053 KIAA1328Q86T90 577 aa14.79□□□□□ -0.04
TCF4-248ENST00000616053 ZNF397Q8NF99 534 aaPredicted RBP14.78□□□□□ -0.04
TCF4-248ENST00000616053 BICD1Q96G01 975 aa14.78□□□□□ -0.04
TCF4-248ENST00000616053 GOPCQ9HD26 462 aa14.78□□□□□ -0.04
TCF4-248ENST00000616053 POLD1P28340 1107 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms