RNA–Protein interactions for RNA: ENST00000616003.4

MID1-212, Transcript of midline 1, humanhuman

TSL 1 (best) BASIC

Gene MID1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MID1-212ENST00000616003 SNX21Q969T3 373 aa9.78□□□□□ -0.84
MID1-212ENST00000616003 CDC42BPGQ6DT37 1551 aa9.78□□□□□ -0.84
MID1-212ENST00000616003 CD109Q6YHK3 1445 aa9.78□□□□□ -0.84
MID1-212ENST00000616003 IL16Q14005 1332 aa9.78□□□□□ -0.84
MID1-212ENST00000616003 KIF16BQ96L93 1317 aa9.78□□□□□ -0.84
MID1-212ENST00000616003 AFAP1Q8N556 730 aa9.78□□□□□ -0.84
MID1-212ENST00000616003 GRPEL1Q9HAV7 217 aa9.78□□□□□ -0.84
MID1-212ENST00000616003 PIK3C2BO00750 1634 aa9.78□□□□□ -0.84
MID1-212ENST00000616003 CAMSAP1Q5T5Y3 1602 aa9.77□□□□□ -0.85
MID1-212ENST00000616003 TRIM27P14373 513 aa9.77□□□□□ -0.85
MID1-212ENST00000616003 MTHFSP49914 203 aa9.77□□□□□ -0.85
MID1-212ENST00000616003 FAM177A1Q8N128 213 aaPredicted RBP9.77□□□□□ -0.85
MID1-212ENST00000616003 GZF1Q9H116 711 aaPredicted RBP9.77□□□□□ -0.85
MID1-212ENST00000616003 SMC4Q9NTJ3 1288 aa9.77□□□□□ -0.85
MID1-212ENST00000616003 FRMPD1Q5SYB0 1578 aa9.76□□□□□ -0.85
MID1-212ENST00000616003 KIF3BO15066 747 aa9.76□□□□□ -0.85
MID1-212ENST00000616003 CLTCQ00610 1675 aaKnown RBP9.76□□□□□ -0.85
MID1-212ENST00000616003 APPP05067 770 aa9.76□□□□□ -0.85
MID1-212ENST00000616003 TNNT2P45379 298 aaPredicted RBP9.76□□□□□ -0.85
MID1-212ENST00000616003 ATF7IPQ6VMQ6 1270 aa9.76□□□□□ -0.85
MID1-212ENST00000616003 GBP4Q96PP9 640 aa9.76□□□□□ -0.85
MID1-212ENST00000616003 ITPRIPQ8IWB1 547 aa9.75□□□□□ -0.85
MID1-212ENST00000616003 SPRYD3Q8NCJ5 442 aa9.75□□□□□ -0.85
MID1-212ENST00000616003 NPATQ14207 1427 aa9.75□□□□□ -0.85
MID1-212ENST00000616003 ARHGAP31Q2M1Z3 1444 aa9.75□□□□□ -0.85
MID1-212ENST00000616003 ESPNB1AK53 854 aa9.74□□□□□ -0.85
MID1-212ENST00000616003 SKOR2Q2VWA4 1001 aaPredicted RBP9.74□□□□□ -0.85
MID1-212ENST00000616003 ZNF428Q96B54 188 aa9.74□□□□□ -0.85
MID1-212ENST00000616003 SLC12A5Q9H2X9 1139 aa9.74□□□□□ -0.85
MID1-212ENST00000616003 C14orf93Q9H972 538 aaKnown RBP9.74□□□□□ -0.85
MID1-212ENST00000616003 PPIP5K1Q6PFW1 1433 aa9.74□□□□□ -0.85
MID1-212ENST00000616003 IBTKQ9P2D0 1353 aaPredicted RBP9.74□□□□□ -0.85
MID1-212ENST00000616003 NEXMIFQ5QGS0 1516 aa9.74□□□□□ -0.85
MID1-212ENST00000616003 U2AF1L5P0DN76 240 aaPredicted RBP9.74□□□□□ -0.85
MID1-212ENST00000616003 U2AF1Q01081 240 aaKnown RBP eCLIP9.74□□□□□ -0.85
MID1-212ENST00000616003 NUCB1Q02818 461 aa9.74□□□□□ -0.85
MID1-212ENST00000616003 RAB3GAP1Q15042 981 aa9.74□□□□□ -0.85
MID1-212ENST00000616003 TMEM51Q9NW97 253 aa9.74□□□□□ -0.85
MID1-212ENST00000616003 KIF20BQ96Q89 1820 aa9.74□□□□□ -0.85
MID1-212ENST00000616003 RPGRIP1LQ68CZ1 1315 aa9.73□□□□□ -0.85
MID1-212ENST00000616003 EVC2Q86UK5 1308 aa9.73□□□□□ -0.85
MID1-212ENST00000616003 BMP2KLQ5H9B9 411 aa9.73□□□□□ -0.85
MID1-212ENST00000616003 SSH1Q8WYL5 1049 aa9.73□□□□□ -0.85
MID1-212ENST00000616003 TSR2Q969E8 191 aaKnown RBP9.73□□□□□ -0.85
MID1-212ENST00000616003 ZBTB40Q9NUA8 1239 aa9.73□□□□□ -0.85
MID1-212ENST00000616003 ABCC3O15438 1527 aa9.73□□□□□ -0.85
MID1-212ENST00000616003 LRRC7Q96NW7 1537 aa9.73□□□□□ -0.85
MID1-212ENST00000616003 ZFYVE9O95405 1425 aa9.72□□□□□ -0.85
MID1-212ENST00000616003 TNPO1Q92973 898 aaKnown RBP9.72□□□□□ -0.85
MID1-212ENST00000616003 PLEKHF1Q96S99 279 aa9.72□□□□□ -0.85
MID1-212ENST00000616003 TRAK1Q9UPV9 953 aa9.72□□□□□ -0.85
MID1-212ENST00000616003 PIK3R4Q99570 1358 aa9.72□□□□□ -0.85
MID1-212ENST00000616003 ERBB4Q15303 1308 aa9.72□□□□□ -0.85
MID1-212ENST00000616003 PTCH1Q13635 1447 aa9.72□□□□□ -0.85
MID1-212ENST00000616003 HSP90AB1P08238 724 aaKnown RBP9.72□□□□□ -0.85
MID1-212ENST00000616003 EXOSC9Q06265 439 aaKnown RBP9.72□□□□□ -0.85
MID1-212ENST00000616003 A0A1W2PP64 1363 aa9.72□□□□□ -0.85
MID1-212ENST00000616003 IPO8O15397 1037 aaKnown RBP9.71□□□□□ -0.86
MID1-212ENST00000616003 TMPOP42166 694 aaKnown RBP9.71□□□□□ -0.86
MID1-212ENST00000616003 ALDH1L2Q3SY69 923 aa9.71□□□□□ -0.86
MID1-212ENST00000616003 TMEM57Q8N5G2 664 aa9.71□□□□□ -0.86
MID1-212ENST00000616003 TRIM44Q96DX7 344 aaPredicted RBP9.71□□□□□ -0.86
MID1-212ENST00000616003 TRIM35Q9UPQ4 493 aa9.71□□□□□ -0.86
MID1-212ENST00000616003 CHD1LQ86WJ1 897 aa9.7□□□□□ -0.86
MID1-212ENST00000616003 SIGLEC1Q9BZZ2 1709 aa9.7□□□□□ -0.86
MID1-212ENST00000616003 SOX12O15370 315 aa9.7□□□□□ -0.86
MID1-212ENST00000616003 TPM2P07951 284 aa9.7□□□□□ -0.86
MID1-212ENST00000616003 BRPF1P55201 1214 aaPredicted RBP9.7□□□□□ -0.86
MID1-212ENST00000616003 CCDC173Q0VFZ6 552 aa9.7□□□□□ -0.86
MID1-212ENST00000616003 CLEC17AQ6ZS10 378 aa9.7□□□□□ -0.86
MID1-212ENST00000616003 NOB1Q9ULX3 412 aaKnown RBP9.7□□□□□ -0.86
MID1-212ENST00000616003 ATAD2Q6PL18 1390 aa9.69□□□□□ -0.86
MID1-212ENST00000616003 K7ELQ4 463 aaPredicted RBP9.69□□□□□ -0.86
MID1-212ENST00000616003 RAD21O60216 631 aa9.68□□□□□ -0.86
MID1-212ENST00000616003 MYCNP04198 464 aaPredicted RBP9.68□□□□□ -0.86
MID1-212ENST00000616003 FAM135BQ49AJ0 1406 aa9.68□□□□□ -0.86
MID1-212ENST00000616003 ASXL2Q76L83 1435 aa9.68□□□□□ -0.86
MID1-212ENST00000616003 POGZQ7Z3K3 1410 aa9.68□□□□□ -0.86
MID1-212ENST00000616003 GCC1Q96CN9 775 aa9.68□□□□□ -0.86
MID1-212ENST00000616003 KIF2CQ99661 725 aa9.68□□□□□ -0.86
MID1-212ENST00000616003 SLC52A1Q9NWF4 448 aa9.68□□□□□ -0.86
MID1-212ENST00000616003 PNPLA6Q8IY17 1366 aa9.68□□□□□ -0.86
MID1-212ENST00000616003 GOLGA6L22H0YM25 854 aa9.68□□□□□ -0.86
MID1-212ENST00000616003 LNPKQ9C0E8 428 aa9.68□□□□□ -0.86
MID1-212ENST00000616003 PDCL3Q9H2J4 239 aa9.68□□□□□ -0.86
MID1-212ENST00000616003 CD163L1Q9NR16 1453 aa9.68□□□□□ -0.86
MID1-212ENST00000616003 MLH3Q9UHC1 1453 aa9.68□□□□□ -0.86
MID1-212ENST00000616003 KDM4AO75164 1064 aa9.67□□□□□ -0.86
MID1-212ENST00000616003 PSEN1P49768 467 aa9.67□□□□□ -0.86
MID1-212ENST00000616003 GAS2L3Q86XJ1 694 aa9.67□□□□□ -0.86
MID1-212ENST00000616003 PPP1R9BQ96SB3 815 aa9.67□□□□□ -0.86
MID1-212ENST00000616003 PTPRMP28827 1452 aa9.67□□□□□ -0.86
MID1-212ENST00000616003 YEATS2Q9ULM3 1422 aa9.67□□□□□ -0.86
MID1-212ENST00000616003 U2SURPO15042 1029 aaKnown RBP9.66□□□□□ -0.86
MID1-212ENST00000616003 KLHL40Q2TBA0 621 aa9.66□□□□□ -0.86
MID1-212ENST00000616003 HSP90AB4PQ58FF6 505 aa9.66□□□□□ -0.86
MID1-212ENST00000616003 CEP120Q8N960 986 aa9.66□□□□□ -0.86
MID1-212ENST00000616003 NASPP49321 788 aaPredicted RBP9.66□□□□□ -0.86
MID1-212ENST00000616003 TBC1D9Q6ZT07 1266 aa9.66□□□□□ -0.86
MID1-212ENST00000616003 CHGAP10645 457 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms