RNA–Protein interactions for RNA: ENST00000615301.4

SHTN1-207, Transcript of shootin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHTN1, Length 6,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-207ENST00000615301 PNISRQ8TF01 805 aaKnown RBP11.66□□□□□ -0.54
SHTN1-207ENST00000615301 TXLNAP40222 546 aa11.66□□□□□ -0.54
SHTN1-207ENST00000615301 ENOX2Q16206 610 aaKnown RBP11.66□□□□□ -0.54
SHTN1-207ENST00000615301 CCAR1Q8IX12 1150 aaKnown RBP11.66□□□□□ -0.54
SHTN1-207ENST00000615301 SLC12A5Q9H2X9 1139 aa11.66□□□□□ -0.54
SHTN1-207ENST00000615301 MVPQ14764 893 aaKnown RBP11.66□□□□□ -0.54
SHTN1-207ENST00000615301 MYO6Q9UM54 1294 aa11.66□□□□□ -0.54
SHTN1-207ENST00000615301 PIBF1Q8WXW3 757 aa11.66□□□□□ -0.54
SHTN1-207ENST00000615301 AEBP1Q8IUX7 1158 aa11.65□□□□□ -0.54
SHTN1-207ENST00000615301 UPF3BQ9BZI7 483 aaKnown RBP11.65□□□□□ -0.54
SHTN1-207ENST00000615301 ATF7IPQ6VMQ6 1270 aa11.65□□□□□ -0.54
SHTN1-207ENST00000615301 ERLIN1O75477 346 aa11.65□□□□□ -0.54
SHTN1-207ENST00000615301 ATP2B2Q01814 1243 aa11.65□□□□□ -0.54
SHTN1-207ENST00000615301 NBPF8Q3BBV2 869 aa11.65□□□□□ -0.54
SHTN1-207ENST00000615301 KLHL34Q8N239 644 aa11.65□□□□□ -0.54
SHTN1-207ENST00000615301 PDRG1Q9NUG6 133 aa11.65□□□□□ -0.54
SHTN1-207ENST00000615301 HDGFL1Q5TGJ6 251 aa11.65□□□□□ -0.55
SHTN1-207ENST00000615301 TMX1Q9H3N1 280 aa11.65□□□□□ -0.55
SHTN1-207ENST00000615301 TTC39AQ5SRH9 613 aa11.64□□□□□ -0.55
SHTN1-207ENST00000615301 SYCP1Q15431 976 aa11.64□□□□□ -0.55
SHTN1-207ENST00000615301 C20orf194Q5TEA3 1177 aa11.64□□□□□ -0.55
SHTN1-207ENST00000615301 JMYQ8N9B5 988 aa11.64□□□□□ -0.55
SHTN1-207ENST00000615301 UBXN4Q92575 508 aa11.64□□□□□ -0.55
SHTN1-207ENST00000615301 ZHX1Q9UKY1 873 aaPredicted RBP11.64□□□□□ -0.55
SHTN1-207ENST00000615301 CEP57L1Q8IYX8 460 aa11.64□□□□□ -0.55
SHTN1-207ENST00000615301 EIF3JO75822 258 aaKnown RBP11.64□□□□□ -0.55
SHTN1-207ENST00000615301 SULT6B1Q6IMI4 303 aa11.64□□□□□ -0.55
SHTN1-207ENST00000615301 TMEM132AQ24JP5 1023 aa11.64□□□□□ -0.55
SHTN1-207ENST00000615301 BLOC1S2Q6QNY1 142 aa11.64□□□□□ -0.55
SHTN1-207ENST00000615301 SPINK5Q9NQ38 1064 aaPredicted RBP11.63□□□□□ -0.55
SHTN1-207ENST00000615301 PDCL3Q9H2J4 239 aa11.63□□□□□ -0.55
SHTN1-207ENST00000615301 SEPT11Q9NVA2 429 aaKnown RBP11.63□□□□□ -0.55
SHTN1-207ENST00000615301 HIP1O00291 1037 aa11.63□□□□□ -0.55
SHTN1-207ENST00000615301 AACSQ86V21 672 aa11.63□□□□□ -0.55
SHTN1-207ENST00000615301 NUTM1Q86Y26 1132 aa11.63□□□□□ -0.55
SHTN1-207ENST00000615301 SSBP05455 408 aaKnown RBP eCLIP11.63□□□□□ -0.55
SHTN1-207ENST00000615301 RBM42Q9BTD8 480 aaKnown RBP11.63□□□□□ -0.55
SHTN1-207ENST00000615301 FGD6Q6ZV73 1430 aa11.63□□□□□ -0.55
SHTN1-207ENST00000615301 CFAP100Q494V2 611 aa11.63□□□□□ -0.55
SHTN1-207ENST00000615301 CNNM1Q9NRU3 951 aa11.63□□□□□ -0.55
SHTN1-207ENST00000615301 POLR3GO15318 223 aaPredicted RBP11.62□□□□□ -0.55
SHTN1-207ENST00000615301 FKBP4Q02790 459 aaKnown RBP eCLIP11.62□□□□□ -0.55
SHTN1-207ENST00000615301 SMARCA5O60264 1052 aaPredicted RBP11.62□□□□□ -0.55
SHTN1-207ENST00000615301 EXOC6BQ9Y2D4 811 aa11.62□□□□□ -0.55
SHTN1-207ENST00000615301 PDS5BQ9NTI5 1447 aa11.62□□□□□ -0.55
SHTN1-207ENST00000615301 ERLIN2O94905 339 aa11.62□□□□□ -0.55
SHTN1-207ENST00000615301 LARP6Q9BRS8 491 aaKnown RBP11.62□□□□□ -0.55
SHTN1-207ENST00000615301 CCDC83Q8IWF9 413 aa11.62□□□□□ -0.55
SHTN1-207ENST00000615301 CGNQ9P2M7 1197 aaKnown RBP11.62□□□□□ -0.55
SHTN1-207ENST00000615301 SRGAP3O43295 1099 aa11.62□□□□□ -0.55
SHTN1-207ENST00000615301 MYL6BP14649 208 aa11.62□□□□□ -0.55
SHTN1-207ENST00000615301 SSFA2P28290 1259 aa11.62□□□□□ -0.55
SHTN1-207ENST00000615301 SEPT7Q16181 437 aaKnown RBP11.61□□□□□ -0.55
SHTN1-207ENST00000615301 CASTP20810 708 aaKnown RBP11.61□□□□□ -0.55
SHTN1-207ENST00000615301 PIP4K2AP48426 406 aaPredicted RBP11.61□□□□□ -0.55
SHTN1-207ENST00000615301 TRMT1Q9NXH9 659 aaKnown RBP11.61□□□□□ -0.55
SHTN1-207ENST00000615301 CCDC158Q5M9N0 1113 aa11.61□□□□□ -0.55
SHTN1-207ENST00000615301 TRIM22Q8IYM9 498 aa11.61□□□□□ -0.55
SHTN1-207ENST00000615301 TMEM57Q8N5G2 664 aa11.61□□□□□ -0.55
SHTN1-207ENST00000615301 PAF1Q8N7H5 531 aa11.61□□□□□ -0.55
SHTN1-207ENST00000615301 CCDC85AQ96PX6 553 aaPredicted RBP11.61□□□□□ -0.55
SHTN1-207ENST00000615301 USP25Q9UHP3 1055 aa11.61□□□□□ -0.55
SHTN1-207ENST00000615301 MAP3K11Q16584 847 aa11.61□□□□□ -0.55
SHTN1-207ENST00000615301 ARHGAP29Q52LW3 1261 aa11.61□□□□□ -0.55
SHTN1-207ENST00000615301 GDPD2Q9HCC8 539 aa11.61□□□□□ -0.55
SHTN1-207ENST00000615301 TMCO3Q6UWJ1 677 aa11.61□□□□□ -0.55
SHTN1-207ENST00000615301 ZFP91Q96JP5 570 aaPredicted RBP11.61□□□□□ -0.55
SHTN1-207ENST00000615301 SRCIN1Q9C0H9 1055 aa11.61□□□□□ -0.55
SHTN1-207ENST00000615301 CCDC69A6NI79 296 aa11.6□□□□□ -0.55
SHTN1-207ENST00000615301 WIZO95785 1651 aa11.6□□□□□ -0.55
SHTN1-207ENST00000615301 DNA2P51530 1060 aa11.6□□□□□ -0.55
SHTN1-207ENST00000615301 ANKRD1Q15327 319 aa11.6□□□□□ -0.55
SHTN1-207ENST00000615301 ERC1Q8IUD2 1116 aa11.6□□□□□ -0.55
SHTN1-207ENST00000615301 ABTB2Q8N961 1025 aa11.6□□□□□ -0.55
SHTN1-207ENST00000615301 GAS2L2Q8NHY3 880 aa11.6□□□□□ -0.55
SHTN1-207ENST00000615301 SPDYE4A6NLX3 237 aa11.6□□□□□ -0.55
SHTN1-207ENST00000615301 CBFA2T2O43439 604 aa11.6□□□□□ -0.55
SHTN1-207ENST00000615301 THUMPD2Q9BTF0 503 aaKnown RBP11.6□□□□□ -0.55
SHTN1-207ENST00000615301 CIZ1Q9ULV3 898 aaPredicted RBP11.6□□□□□ -0.55
SHTN1-207ENST00000615301 URI1O94763 535 aaPredicted RBP11.6□□□□□ -0.55
SHTN1-207ENST00000615301 PTPN14Q15678 1187 aa11.6□□□□□ -0.55
SHTN1-207ENST00000615301 C16orf45Q96MC5 204 aaPredicted RBP11.6□□□□□ -0.55
SHTN1-207ENST00000615301 DACH1Q9UI36 760 aa11.6□□□□□ -0.55
SHTN1-207ENST00000615301 CKAP2LQ8IYA6 745 aa11.59□□□□□ -0.55
SHTN1-207ENST00000615301 PTPRGP23470 1445 aa11.59□□□□□ -0.55
SHTN1-207ENST00000615301 MYOM3Q5VTT5 1437 aa11.59□□□□□ -0.55
SHTN1-207ENST00000615301 SMG6Q86US8 1419 aaKnown RBP11.59□□□□□ -0.55
SHTN1-207ENST00000615301 GOLGA6L7A0A1B0GV03 622 aa11.59□□□□□ -0.55
SHTN1-207ENST00000615301 EPB41L2O43491 1005 aaKnown RBP11.59□□□□□ -0.55
SHTN1-207ENST00000615301 STIM1Q13586 685 aa11.59□□□□□ -0.55
SHTN1-207ENST00000615301 MIA2Q96PC5 1412 aa11.59□□□□□ -0.55
SHTN1-207ENST00000615301 RBM25P49756 843 aaKnown RBP11.59□□□□□ -0.55
SHTN1-207ENST00000615301 KIAA1328Q86T90 577 aa11.59□□□□□ -0.55
SHTN1-207ENST00000615301 MIS18AQ9NYP9 233 aa11.59□□□□□ -0.55
SHTN1-207ENST00000615301 KLHL10Q6JEL2 608 aa11.59□□□□□ -0.55
SHTN1-207ENST00000615301 PRAM1Q96QH2 718 aa11.59□□□□□ -0.55
SHTN1-207ENST00000615301 CCT4P50991 539 aaKnown RBP11.58□□□□□ -0.56
SHTN1-207ENST00000615301 EIF5P55010 431 aaKnown RBP11.58□□□□□ -0.56
SHTN1-207ENST00000615301 GUCY1B3Q02153 619 aa11.58□□□□□ -0.56
SHTN1-207ENST00000615301 ANKRD50Q9ULJ7 1429 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms