RNA–Protein interactions for RNA: ENST00000614478.1

GEN1-208, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

Gene GEN1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-208ENST00000614478 JCADQ9P266 1359 aa23.27■■□□□ 1.32
GEN1-208ENST00000614478 SOX12O15370 315 aa23.27■■□□□ 1.32
GEN1-208ENST00000614478 NEUROD2Q15784 382 aa23.27■■□□□ 1.32
GEN1-208ENST00000614478 NUTM2GQ5VZR2 741 aa23.26■■□□□ 1.31
GEN1-208ENST00000614478 WWC1Q8IX03 1113 aa23.26■■□□□ 1.31
GEN1-208ENST00000614478 PNNQ9H307 717 aaKnown RBP23.26■■□□□ 1.31
GEN1-208ENST00000614478 LMOD2Q6P5Q4 547 aa23.25■■□□□ 1.31
GEN1-208ENST00000614478 FCHSD2O94868 740 aa23.24■■□□□ 1.31
GEN1-208ENST00000614478 IRX6P78412 446 aaPredicted RBP23.24■■□□□ 1.31
GEN1-208ENST00000614478 SLFN5Q08AF3 891 aa23.24■■□□□ 1.31
GEN1-208ENST00000614478 USP54Q70EL1 1684 aa23.24■■□□□ 1.31
GEN1-208ENST00000614478 DUSP27Q5VZP5 1158 aa23.24■■□□□ 1.31
GEN1-208ENST00000614478 MARF1Q9Y4F3 1742 aaKnown RBP23.24■■□□□ 1.31
GEN1-208ENST00000614478 MED1Q15648 1581 aaPredicted RBP23.23■■□□□ 1.31
GEN1-208ENST00000614478 NCBP3Q53F19 620 aaKnown RBP23.23■■□□□ 1.31
GEN1-208ENST00000614478 ILDR1Q86SU0 546 aaPredicted RBP23.23■■□□□ 1.31
GEN1-208ENST00000614478 PEAK1Q9H792 1746 aa23.23■■□□□ 1.31
GEN1-208ENST00000614478 RNF123Q5XPI4 1314 aa23.22■■□□□ 1.31
GEN1-208ENST00000614478 MAPK8IP3Q9UPT6 1336 aa23.22■■□□□ 1.31
GEN1-208ENST00000614478 PHF23Q9BUL5 403 aaPredicted RBP23.22■■□□□ 1.31
GEN1-208ENST00000614478 RCAN3Q9UKA8 241 aa23.22■■□□□ 1.31
GEN1-208ENST00000614478 CRYBG1Q9Y4K1 1723 aa23.22■■□□□ 1.31
GEN1-208ENST00000614478 MAP3K19Q56UN5 1328 aa23.22■■□□□ 1.31
GEN1-208ENST00000614478 CCDC27Q2M243 656 aa23.22■■□□□ 1.31
GEN1-208ENST00000614478 RSPH6AQ9H0K4 717 aa23.22■■□□□ 1.31
GEN1-208ENST00000614478 ABCA3Q99758 1704 aa23.21■■□□□ 1.31
GEN1-208ENST00000614478 TRMT2AQ8IZ69 625 aaKnown RBP23.21■■□□□ 1.31
GEN1-208ENST00000614478 SPINK5Q9NQ38 1064 aaPredicted RBP23.21■■□□□ 1.31
GEN1-208ENST00000614478 E9PSI1 815 aa23.2■■□□□ 1.3
GEN1-208ENST00000614478 HMOX1P09601 288 aa23.2■■□□□ 1.3
GEN1-208ENST00000614478 PRKAR2BP31323 418 aa23.19■■□□□ 1.3
GEN1-208ENST00000614478 TMPOP42166 694 aaKnown RBP23.19■■□□□ 1.3
GEN1-208ENST00000614478 EIF4A2Q14240 407 aaKnown RBP23.19■■□□□ 1.3
GEN1-208ENST00000614478 HSP90AB2PQ58FF8 381 aa23.19■■□□□ 1.3
GEN1-208ENST00000614478 PHRF1Q9P1Y6 1649 aaKnown RBP23.18■■□□□ 1.3
GEN1-208ENST00000614478 SPATA31A6Q5VVP1 1343 aa23.18■■□□□ 1.3
GEN1-208ENST00000614478 AMPHP49418 695 aa23.17■■□□□ 1.3
GEN1-208ENST00000614478 WDR63Q8IWG1 891 aa23.17■■□□□ 1.3
GEN1-208ENST00000614478 FLT4P35916 1363 aa23.17■■□□□ 1.3
GEN1-208ENST00000614478 NEFMP07197 916 aa23.16■■□□□ 1.3
GEN1-208ENST00000614478 USP19O94966 1318 aa23.16■■□□□ 1.3
GEN1-208ENST00000614478 SLIT3O75094 1523 aa23.14■■□□□ 1.29
GEN1-208ENST00000614478 RIPK4P57078 832 aa23.13■■□□□ 1.29
GEN1-208ENST00000614478 PHACTR3Q96KR7 559 aa23.13■■□□□ 1.29
GEN1-208ENST00000614478 KIF24Q5T7B8 1368 aa23.12■■□□□ 1.29
GEN1-208ENST00000614478 CABLES1Q8TDN4 633 aa23.12■■□□□ 1.29
GEN1-208ENST00000614478 TRIM35Q9UPQ4 493 aa23.12■■□□□ 1.29
GEN1-208ENST00000614478 RRP1P56182 461 aaKnown RBP23.11■■□□□ 1.29
GEN1-208ENST00000614478 HAP1P54257 671 aaPredicted RBP23.1■■□□□ 1.29
GEN1-208ENST00000614478 SULT6B1Q6IMI4 303 aa23.1■■□□□ 1.29
GEN1-208ENST00000614478 KCNH5Q8NCM2 988 aa23.1■■□□□ 1.29
GEN1-208ENST00000614478 RGPD1P0DJD0 1748 aa23.09■■□□□ 1.29
GEN1-208ENST00000614478 PLEKHG5O94827 1062 aa23.09■■□□□ 1.29
GEN1-208ENST00000614478 HOXC9P31274 260 aa23.09■■□□□ 1.29
GEN1-208ENST00000614478 PPP4R2Q9NY27 417 aa23.09■■□□□ 1.29
GEN1-208ENST00000614478 NFAT5O94916 1531 aa23.08■■□□□ 1.29
GEN1-208ENST00000614478 LRP6O75581 1613 aa23.08■■□□□ 1.29
GEN1-208ENST00000614478 GCP02774 474 aa23.08■■□□□ 1.29
GEN1-208ENST00000614478 NFE2L2Q16236 605 aa23.08■■□□□ 1.29
GEN1-208ENST00000614478 AEBP1Q8IUX7 1158 aa23.08■■□□□ 1.29
GEN1-208ENST00000614478 NUTM2BA6NNL0 878 aaPredicted RBP23.07■■□□□ 1.28
GEN1-208ENST00000614478 NUTM2EB1AL46 878 aaPredicted RBP23.07■■□□□ 1.28
GEN1-208ENST00000614478 NUTM2AQ8IVF1 878 aaPredicted RBP23.07■■□□□ 1.28
GEN1-208ENST00000614478 LTN1O94822 1766 aa23.07■■□□□ 1.28
GEN1-208ENST00000614478 RTL1A6NKG5 1358 aa23.06■■□□□ 1.28
GEN1-208ENST00000614478 MYH16Q9H6N6 1097 aa23.05■■□□□ 1.28
GEN1-208ENST00000614478 IP6K1Q92551 441 aa23.03■■□□□ 1.28
GEN1-208ENST00000614478 EYA1Q99502 592 aa23.03■■□□□ 1.28
GEN1-208ENST00000614478 CPDO75976 1380 aa23.03■■□□□ 1.28
GEN1-208ENST00000614478 IL16Q14005 1332 aa23.03■■□□□ 1.28
GEN1-208ENST00000614478 IGSF1Q8N6C5 1336 aa23.02■■□□□ 1.28
GEN1-208ENST00000614478 ADAMTS2O95450 1211 aa23.02■■□□□ 1.28
GEN1-208ENST00000614478 COL14A1Q05707 1796 aaKnown RBP23.01■■□□□ 1.27
GEN1-208ENST00000614478 KIAA0232Q92628 1395 aa23.01■■□□□ 1.27
GEN1-208ENST00000614478 ZBTB7CA1YPR0 619 aa23■■□□□ 1.27
GEN1-208ENST00000614478 ZC3H6P61129 1189 aaKnown RBP23■■□□□ 1.27
GEN1-208ENST00000614478 PLIN1O60240 522 aa23■■□□□ 1.27
GEN1-208ENST00000614478 LTV1Q96GA3 475 aaPredicted RBP23■■□□□ 1.27
GEN1-208ENST00000614478 DLG5Q8TDM6 1919 aa22.99■■□□□ 1.27
GEN1-208ENST00000614478 ARHGEF25Q86VW2 580 aa22.99■■□□□ 1.27
GEN1-208ENST00000614478 KDRP35968 1356 aa22.99■■□□□ 1.27
GEN1-208ENST00000614478 PLCH1Q4KWH8 1693 aa22.99■■□□□ 1.27
GEN1-208ENST00000614478 MEX3CQ5U5Q3 659 aaKnown RBP22.98■■□□□ 1.27
GEN1-208ENST00000614478 PRDM11Q9NQV5 511 aa22.98■■□□□ 1.27
GEN1-208ENST00000614478 ABCC6O95255 1503 aa22.98■■□□□ 1.27
GEN1-208ENST00000614478 LMOD3Q0VAK6 560 aa22.98■■□□□ 1.27
GEN1-208ENST00000614478 COL18A1P39060 1754 aa22.98■■□□□ 1.27
GEN1-208ENST00000614478 NWD2Q9ULI1 1742 aa22.97■■□□□ 1.27
GEN1-208ENST00000614478 FANCIQ9NVI1 1328 aa22.97■■□□□ 1.27
GEN1-208ENST00000614478 TSR2Q969E8 191 aaKnown RBP22.97■■□□□ 1.27
GEN1-208ENST00000614478 RGPD5Q99666 1765 aa22.96■■□□□ 1.27
GEN1-208ENST00000614478 LMO7Q8WWI1 1683 aa22.96■■□□□ 1.27
GEN1-208ENST00000614478 FAM83GA6ND36 823 aa22.95■■□□□ 1.26
GEN1-208ENST00000614478 CALD1Q05682 793 aaKnown RBP22.95■■□□□ 1.26
GEN1-208ENST00000614478 C8orf37Q96NL8 207 aa22.95■■□□□ 1.26
GEN1-208ENST00000614478 THUMPD2Q9BTF0 503 aaKnown RBP22.95■■□□□ 1.26
GEN1-208ENST00000614478 BCAR3O75815 825 aa22.94■■□□□ 1.26
GEN1-208ENST00000614478 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.94■■□□□ 1.26
GEN1-208ENST00000614478 NGLY1Q96IV0 654 aa22.93■■□□□ 1.26
GEN1-208ENST00000614478 SLIT2O94813 1529 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms