RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 PNISRQ8TF01 805 aaKnown RBP8.39□□□□□ -1.07
CBWD3-210ENST00000614398 DDX17Q92841 729 aaKnown RBP8.39□□□□□ -1.07
CBWD3-210ENST00000614398 XPCQ01831 940 aaPredicted RBP8.38□□□□□ -1.07
CBWD3-210ENST00000614398 NCBP3Q53F19 620 aaKnown RBP8.38□□□□□ -1.07
CBWD3-210ENST00000614398 IP6K1Q92551 441 aa8.38□□□□□ -1.07
CBWD3-210ENST00000614398 SPATA31A6Q5VVP1 1343 aa8.38□□□□□ -1.07
CBWD3-210ENST00000614398 RGPD5Q99666 1765 aa8.38□□□□□ -1.07
CBWD3-210ENST00000614398 MRS2Q9HD23 443 aa8.37□□□□□ -1.07
CBWD3-210ENST00000614398 WNK3Q9BYP7 1800 aa8.37□□□□□ -1.07
CBWD3-210ENST00000614398 HOXC9P31274 260 aa8.37□□□□□ -1.07
CBWD3-210ENST00000614398 KDRP35968 1356 aa8.37□□□□□ -1.07
CBWD3-210ENST00000614398 CCDC184Q52MB2 194 aa8.36□□□□□ -1.07
CBWD3-210ENST00000614398 EMILIN1Q9Y6C2 1016 aa8.36□□□□□ -1.07
CBWD3-210ENST00000614398 IL13P35225 146 aa8.36□□□□□ -1.07
CBWD3-210ENST00000614398 DIAPH1O60610 1272 aaKnown RBP8.35□□□□□ -1.07
CBWD3-210ENST00000614398 NUDCQ9Y266 331 aa8.35□□□□□ -1.07
CBWD3-210ENST00000614398 IGSF1Q8N6C5 1336 aa8.35□□□□□ -1.07
CBWD3-210ENST00000614398 COL5A2P05997 1499 aaPredicted RBP8.35□□□□□ -1.07
CBWD3-210ENST00000614398 SLIT2O94813 1529 aa8.35□□□□□ -1.07
CBWD3-210ENST00000614398 PIP4K2BP78356 416 aa8.35□□□□□ -1.07
CBWD3-210ENST00000614398 NGEFQ8N5V2 710 aa8.35□□□□□ -1.07
CBWD3-210ENST00000614398 KIAA0232Q92628 1395 aa8.35□□□□□ -1.07
CBWD3-210ENST00000614398 PKD1L3Q7Z443 1732 aa8.34□□□□□ -1.07
CBWD3-210ENST00000614398 PARP4Q9UKK3 1724 aaKnown RBP8.34□□□□□ -1.07
CBWD3-210ENST00000614398 RRS1Q15050 365 aaKnown RBP8.34□□□□□ -1.07
CBWD3-210ENST00000614398 NUTM2GQ5VZR2 741 aa8.34□□□□□ -1.07
CBWD3-210ENST00000614398 RGPD2P0DJD1 1756 aa8.34□□□□□ -1.07
CBWD3-210ENST00000614398 AMPHP49418 695 aa8.34□□□□□ -1.07
CBWD3-210ENST00000614398 FBXO41Q8TF61 875 aa8.34□□□□□ -1.07
CBWD3-210ENST00000614398 LRP6O75581 1613 aa8.33□□□□□ -1.08
CBWD3-210ENST00000614398 TNNT2P45379 298 aaPredicted RBP8.33□□□□□ -1.08
CBWD3-210ENST00000614398 EIF4A2Q14240 407 aaKnown RBP8.33□□□□□ -1.08
CBWD3-210ENST00000614398 PNNQ9H307 717 aaKnown RBP8.33□□□□□ -1.08
CBWD3-210ENST00000614398 ERBB3P21860 1342 aa8.33□□□□□ -1.08
CBWD3-210ENST00000614398 FCHSD2O94868 740 aa8.32□□□□□ -1.08
CBWD3-210ENST00000614398 WDR43Q15061 677 aaKnown RBP eCLIP8.32□□□□□ -1.08
CBWD3-210ENST00000614398 LMOD2Q6P5Q4 547 aa8.32□□□□□ -1.08
CBWD3-210ENST00000614398 ADAMTS7Q9UKP4 1686 aa8.32□□□□□ -1.08
CBWD3-210ENST00000614398 HSPA1LP34931 641 aa8.32□□□□□ -1.08
CBWD3-210ENST00000614398 HSP90AB2PQ58FF8 381 aa8.32□□□□□ -1.08
CBWD3-210ENST00000614398 WDR17Q8IZU2 1322 aa8.31□□□□□ -1.08
CBWD3-210ENST00000614398 FBLN1P23142 703 aa8.31□□□□□ -1.08
CBWD3-210ENST00000614398 RSPH6AQ9H0K4 717 aa8.31□□□□□ -1.08
CBWD3-210ENST00000614398 LRRC37A3O60309 1634 aa8.31□□□□□ -1.08
CBWD3-210ENST00000614398 CABLES1Q8TDN4 633 aa8.3□□□□□ -1.08
CBWD3-210ENST00000614398 PLEKHF1Q96S99 279 aa8.3□□□□□ -1.08
CBWD3-210ENST00000614398 PRDM11Q9NQV5 511 aa8.3□□□□□ -1.08
CBWD3-210ENST00000614398 CRB1P82279 1406 aa8.3□□□□□ -1.08
CBWD3-210ENST00000614398 ANKRD24Q8TF21 1146 aa8.3□□□□□ -1.08
CBWD3-210ENST00000614398 RUNDC1Q96C34 613 aa8.3□□□□□ -1.08
CBWD3-210ENST00000614398 ADAMTS8Q9UP79 889 aa8.3□□□□□ -1.08
CBWD3-210ENST00000614398 DISP2A7MBM2 1401 aa8.3□□□□□ -1.08
CBWD3-210ENST00000614398 SHANK3Q9BYB0 1731 aa8.3□□□□□ -1.08
CBWD3-210ENST00000614398 FAM83GA6ND36 823 aa8.29□□□□□ -1.08
CBWD3-210ENST00000614398 ZC3H6P61129 1189 aaKnown RBP8.29□□□□□ -1.08
CBWD3-210ENST00000614398 AXIN2Q9Y2T1 843 aa8.29□□□□□ -1.08
CBWD3-210ENST00000614398 OVOS2A0A0G2JMS6 1433 aa8.29□□□□□ -1.08
CBWD3-210ENST00000614398 DLG5Q8TDM6 1919 aa8.29□□□□□ -1.08
CBWD3-210ENST00000614398 CNGB1Q14028 1251 aaPredicted RBP8.29□□□□□ -1.08
CBWD3-210ENST00000614398 CCDC27Q2M243 656 aa8.29□□□□□ -1.08
CBWD3-210ENST00000614398 FNBP4Q8N3X1 1017 aaPredicted RBP8.29□□□□□ -1.08
CBWD3-210ENST00000614398 EYA1Q99502 592 aa8.29□□□□□ -1.08
CBWD3-210ENST00000614398 THSD7AQ9UPZ6 1657 aa8.28□□□□□ -1.08
CBWD3-210ENST00000614398 HAP1P54257 671 aaPredicted RBP8.28□□□□□ -1.08
CBWD3-210ENST00000614398 CARD10Q9BWT7 1032 aa8.28□□□□□ -1.08
CBWD3-210ENST00000614398 PPM1GO15355 546 aaPredicted RBP8.28□□□□□ -1.08
CBWD3-210ENST00000614398 U2AF1L5P0DN76 240 aaPredicted RBP8.28□□□□□ -1.08
CBWD3-210ENST00000614398 U2AF1Q01081 240 aaKnown RBP eCLIP8.28□□□□□ -1.08
CBWD3-210ENST00000614398 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.28□□□□□ -1.08
CBWD3-210ENST00000614398 BCL9LQ86UU0 1499 aa8.28□□□□□ -1.08
CBWD3-210ENST00000614398 SOX12O15370 315 aa8.27□□□□□ -1.08
CBWD3-210ENST00000614398 ZBED9Q6R2W3 1325 aa8.27□□□□□ -1.09
CBWD3-210ENST00000614398 ATRNO75882 1429 aa8.27□□□□□ -1.09
CBWD3-210ENST00000614398 THRAP3Q9Y2W1 955 aaKnown RBP8.27□□□□□ -1.09
CBWD3-210ENST00000614398 ZNF521Q96K83 1311 aa8.27□□□□□ -1.09
CBWD3-210ENST00000614398 NBPF6Q5VWK0 638 aa8.26□□□□□ -1.09
CBWD3-210ENST00000614398 FAM9BQ8IZU0 186 aa8.26□□□□□ -1.09
CBWD3-210ENST00000614398 NBPF4Q96M43 638 aa8.26□□□□□ -1.09
CBWD3-210ENST00000614398 VIRMAQ69YN4 1812 aaKnown RBP8.26□□□□□ -1.09
CBWD3-210ENST00000614398 U2SURPO15042 1029 aaKnown RBP8.26□□□□□ -1.09
CBWD3-210ENST00000614398 CHRNA2Q15822 529 aa8.26□□□□□ -1.09
CBWD3-210ENST00000614398 SIPA1L3O60292 1781 aaPredicted RBP8.26□□□□□ -1.09
CBWD3-210ENST00000614398 SCN11AQ9UI33 1791 aa8.26□□□□□ -1.09
CBWD3-210ENST00000614398 MEGF6O75095 1541 aa8.25□□□□□ -1.09
CBWD3-210ENST00000614398 HTATSF1O43719 755 aaKnown RBP8.25□□□□□ -1.09
CBWD3-210ENST00000614398 SULT6B1Q6IMI4 303 aa8.25□□□□□ -1.09
CBWD3-210ENST00000614398 CDCA7Q9BWT1 371 aaPredicted RBP8.25□□□□□ -1.09
CBWD3-210ENST00000614398 MRC1P22897 1456 aa8.25□□□□□ -1.09
CBWD3-210ENST00000614398 PRKAR2BP31323 418 aa8.25□□□□□ -1.09
CBWD3-210ENST00000614398 VPS72Q15906 364 aa8.25□□□□□ -1.09
CBWD3-210ENST00000614398 NFE2L2Q16236 605 aa8.25□□□□□ -1.09
CBWD3-210ENST00000614398 AMOTQ4VCS5 1084 aa8.25□□□□□ -1.09
CBWD3-210ENST00000614398 SPATA31A5Q5VU36 1347 aa8.25□□□□□ -1.09
CBWD3-210ENST00000614398 SPATA31A7Q8IWB4 1347 aa8.25□□□□□ -1.09
CBWD3-210ENST00000614398 GLI3P10071 1580 aa8.25□□□□□ -1.09
CBWD3-210ENST00000614398 PDE3BQ13370 1112 aa8.24□□□□□ -1.09
CBWD3-210ENST00000614398 BARGINQ6ZT62 677 aa8.24□□□□□ -1.09
CBWD3-210ENST00000614398 UNC5CLQ8IV45 518 aa8.24□□□□□ -1.09
CBWD3-210ENST00000614398 BTG4Q9NY30 223 aa8.24□□□□□ -1.09
CBWD3-210ENST00000614398 IL16Q14005 1332 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms